RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 BADQ92934 168 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 FAM161BQ96MY7 647 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 MMP19Q99542 508 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 ARMT1Q9H993 441 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 GOPCQ9HD26 462 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 XPNPEP3Q9NQH7 507 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 PAG1Q9NWQ8 432 aa18.97■□□□□ 0.63
HERPUD1-215ENST00000568676 CYP2D6P10635 497 aa18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 CDK8P49336 464 aa18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 HNRNPUQ00839 825 aaKnown RBP eCLIP18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 EVX2Q03828 476 aa18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 PRAMEF19Q5SWL8 479 aa18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 C16orf86Q6ZW13 317 aa18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 MSL3Q8N5Y2 521 aaKnown RBP18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 DYNLL2Q96FJ2 89 aa18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 CDX2Q99626 313 aaPredicted RBP18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 TINF2Q9BSI4 451 aa18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 SEMA6BQ9H3T3 888 aa18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 CHMP4BQ9H444 224 aaKnown RBP18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 MYH8P13535 1937 aa18.96■□□□□ 0.63
HERPUD1-215ENST00000568676 UNC80Q8N2C7 3258 aa18.95■□□□□ 0.62
HERPUD1-215ENST00000568676 MBD4O95243 580 aa18.95■□□□□ 0.62
HERPUD1-215ENST00000568676 AKR1A1P14550 325 aa18.95■□□□□ 0.62
HERPUD1-215ENST00000568676 ATP5JP18859 108 aa18.95■□□□□ 0.62
HERPUD1-215ENST00000568676 UBE3CQ15386 1083 aa18.95■□□□□ 0.62
HERPUD1-215ENST00000568676 C9orf50Q5SZB4 431 aa18.95■□□□□ 0.62
HERPUD1-215ENST00000568676 ZSCAN25Q6NSZ9 544 aa18.95■□□□□ 0.62
HERPUD1-215ENST00000568676 TSEN34Q9BSV6 310 aaKnown RBP18.95■□□□□ 0.62
HERPUD1-215ENST00000568676 VWA5AO00534 786 aa18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 CLTBP09497 229 aa18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 EEF2P13639 858 aaKnown RBP18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 STAT3P40763 770 aa18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 TLE2Q04725 743 aa18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 ZNF792Q3KQV3 632 aa18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 FERMT2Q96AC1 680 aa18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 PPP1R9AQ9ULJ8 1098 aa18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 DDX19BQ9UMR2 479 aa18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 CNPY2Q9Y2B0 182 aa18.94■□□□□ 0.62
HERPUD1-215ENST00000568676 PARP14Q460N5 1801 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 TRIM43BA6NCK2 446 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 USP17L12C9JPN9 530 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 USP17L21D6R901 530 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 KIAA0355O15063 1070 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 CLEC10AQ8IUN9 316 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 MAFAQ8NHW3 353 aaPredicted RBP18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 PANK1Q8TE04 598 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 NUP133Q8WUM0 1156 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 TRIM43Q96BQ3 446 aaPredicted RBP18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 TOX2Q96NM4 488 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 HAUS7Q99871 368 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 ARPP21Q9UBL0 812 aaPredicted RBP18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 ZNF214Q9UL59 606 aaPredicted RBP18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 ZBED9Q6R2W3 1325 aa18.93■□□□□ 0.62
HERPUD1-215ENST00000568676 PRKAB2O43741 272 aa18.92■□□□□ 0.62
HERPUD1-215ENST00000568676 SAMD1Q6SPF0 538 aaPredicted RBP18.92■□□□□ 0.62
HERPUD1-215ENST00000568676 SH3RF1Q7Z6J0 888 aa18.92■□□□□ 0.62
HERPUD1-215ENST00000568676 A0A1W2PQ45 241 aaPredicted RBP18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 A0A1W2PQY0 241 aa18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 MOXD2PA6NHM9 499 aa18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 APBB1O00213 710 aa18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 ZNF865P0CJ78 1059 aaPredicted RBP18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 RAG1P15918 1043 aa18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 ANKRD33Q7Z3H0 272 aa18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 RNPC3Q96LT9 517 aaKnown RBP18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 TEX13BQ9BXU2 312 aa18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 BOLA2Q9H3K6 86 aa18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 SLC4A4Q9Y6R1 1079 aa18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 SYNGAP1Q96PV0 1343 aa18.91■□□□□ 0.62
HERPUD1-215ENST00000568676 DCDC2CA8MYV0 355 aa18.9■□□□□ 0.62
HERPUD1-215ENST00000568676 PGK1P00558 417 aa18.9■□□□□ 0.62
HERPUD1-215ENST00000568676 PGK2P07205 417 aa18.9■□□□□ 0.62
HERPUD1-215ENST00000568676 FPGSQ05932 587 aa18.9■□□□□ 0.62
HERPUD1-215ENST00000568676 REPS2Q8NFH8 660 aa18.9■□□□□ 0.62
HERPUD1-215ENST00000568676 ZBTB40Q9NUA8 1239 aa18.9■□□□□ 0.62
HERPUD1-215ENST00000568676 FBXO28Q9NVF7 368 aa18.9■□□□□ 0.62
HERPUD1-215ENST00000568676 LAMA2P24043 3122 aaKnown RBP18.9■□□□□ 0.62
HERPUD1-215ENST00000568676 ADAMTS4O75173 837 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 FAM83BQ5T0W9 1011 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 GIMAP6Q6P9H5 292 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 CTR9Q6PD62 1173 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 MAMDC4Q6UXC1 1216 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 ZNF467Q7Z7K2 595 aaPredicted RBP18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 SLF1Q9BQI6 1058 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 TTYH1Q9H313 450 aaPredicted RBP18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 STARD7Q9NQZ5 370 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 TMEM39AQ9NV64 488 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 FAM184BQ9ULE4 1060 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 ZNFX1Q9P2E3 1918 aaKnown RBP18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 MROH7Q68CQ1 1323 aa18.89■□□□□ 0.61
HERPUD1-215ENST00000568676 COL11A1P12107 1806 aaPredicted RBP18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 BAZ2AQ9UIF9 1905 aaKnown RBP18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 CYP2D7A0A087X1C5 515 aa18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 ATP2A1O14983 1001 aa18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 PQBP1O60828 265 aaKnown RBP18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 FOSL2P15408 326 aa18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 ACLYP53396 1101 aa18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 SBK1Q52WX2 424 aa18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 CCDC174Q6PII3 467 aa18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 SIRT2Q8IXJ6 389 aa18.88■□□□□ 0.61
HERPUD1-215ENST00000568676 PRPF38AQ8NAV1 312 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms