RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ZNF589Q86UQ0 364 aaPredicted RBP34.94■■■■□ 3.18
RAB40C-211ENST00000568586 APBA2Q99767 749 aa34.94■■■■□ 3.18
RAB40C-211ENST00000568586 CRISPLD2Q9H0B8 497 aa34.94■■■■□ 3.18
RAB40C-211ENST00000568586 CLIP2Q9UDT6 1046 aa34.94■■■■□ 3.18
RAB40C-211ENST00000568586 RPTORQ8N122 1335 aa34.94■■■■□ 3.18
RAB40C-211ENST00000568586 FGAP02671 866 aa34.93■■■■□ 3.18
RAB40C-211ENST00000568586 HSPD1P10809 573 aaKnown RBP34.93■■■■□ 3.18
RAB40C-211ENST00000568586 TRIM32Q13049 653 aa34.93■■■■□ 3.18
RAB40C-211ENST00000568586 PPP1R9AQ9ULJ8 1098 aa34.93■■■■□ 3.18
RAB40C-211ENST00000568586 STRNO43815 780 aa34.92■■■■□ 3.18
RAB40C-211ENST00000568586 TTLL1O95922 423 aa34.92■■■■□ 3.18
RAB40C-211ENST00000568586 NDUFB10O96000 172 aa34.92■■■■□ 3.18
RAB40C-211ENST00000568586 TSPY3P0CV98 308 aa34.92■■■■□ 3.18
RAB40C-211ENST00000568586 TSPY8P0CW00 308 aa34.92■■■■□ 3.18
RAB40C-211ENST00000568586 IRX6P78412 446 aaPredicted RBP34.92■■■■□ 3.18
RAB40C-211ENST00000568586 TFAP4Q01664 338 aa34.92■■■■□ 3.18
RAB40C-211ENST00000568586 FAM83BQ5T0W9 1011 aa34.92■■■■□ 3.18
RAB40C-211ENST00000568586 DEFB118Q96PH6 123 aa34.92■■■■□ 3.18
RAB40C-211ENST00000568586 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.92■■■■□ 3.181e-10■■■■■ 39.4
RAB40C-211ENST00000568586 FBXO28Q9NVF7 368 aa34.92■■■■□ 3.18
RAB40C-211ENST00000568586 CCDC171Q6TFL3 1326 aa34.91■■■■□ 3.18
RAB40C-211ENST00000568586 CWC22Q9HCG8 908 aaKnown RBP34.91■■■■□ 3.18
RAB40C-211ENST00000568586 HMX1Q9NP08 348 aaPredicted RBP34.91■■■■□ 3.18
RAB40C-211ENST00000568586 TACC3Q9Y6A5 838 aa34.91■■■■□ 3.18
RAB40C-211ENST00000568586 IVNS1ABPQ9Y6Y0 642 aa34.91■■■■□ 3.18
RAB40C-211ENST00000568586 ORC4O43929 436 aa34.9■■■■□ 3.18
RAB40C-211ENST00000568586 IGHA2P01877 340 aa34.9■■■■□ 3.18
RAB40C-211ENST00000568586 ZKSCAN1P17029 563 aaPredicted RBP34.9■■■■□ 3.18
RAB40C-211ENST00000568586 PDE4AP27815 886 aa34.9■■■■□ 3.18
RAB40C-211ENST00000568586 CTDSPL2Q05D32 466 aa34.9■■■■□ 3.18
RAB40C-211ENST00000568586 TMEM132BQ14DG7 1078 aa34.9■■■■□ 3.18
RAB40C-211ENST00000568586 FAM47AQ5JRC9 791 aa34.9■■■■□ 3.18
RAB40C-211ENST00000568586 GMCL1P1Q8NEA9 526 aa34.9■■■■□ 3.18
RAB40C-211ENST00000568586 MROH8Q9H579 483 aa34.9■■■■□ 3.18
RAB40C-211ENST00000568586 VWA5AO00534 786 aa34.89■■■■□ 3.18
RAB40C-211ENST00000568586 ERCC3P19447 782 aa34.89■■■■□ 3.18
RAB40C-211ENST00000568586 CCL14Q16627 93 aa34.89■■■■□ 3.18
RAB40C-211ENST00000568586 REPS2Q8NFH8 660 aa34.89■■■■□ 3.18
RAB40C-211ENST00000568586 NOVP48745 357 aa34.88■■■■□ 3.17
RAB40C-211ENST00000568586 MFAP1P55081 439 aaKnown RBP34.88■■■■□ 3.17
RAB40C-211ENST00000568586 PPP4R3BQ5MIZ7 849 aa34.88■■■■□ 3.17
RAB40C-211ENST00000568586 WDR78Q5VTH9 848 aa34.88■■■■□ 3.17
RAB40C-211ENST00000568586 ABRAQ8N0Z2 381 aa34.88■■■■□ 3.17
RAB40C-211ENST00000568586 INCENPQ9NQS7 918 aa34.88■■■■□ 3.17
RAB40C-211ENST00000568586 PRKAR2AP13861 404 aaKnown RBP34.87■■■■□ 3.17
RAB40C-211ENST00000568586 NUP88Q99567 741 aaPredicted RBP34.87■■■■□ 3.17
RAB40C-211ENST00000568586 ZNF236Q9UL36 1845 aa34.86■■■■□ 3.17
RAB40C-211ENST00000568586 HIP1O00291 1037 aa34.86■■■■□ 3.17
RAB40C-211ENST00000568586 SLC25A27O95847 323 aa34.86■■■■□ 3.17
RAB40C-211ENST00000568586 CACNB2Q08289 660 aaPredicted RBP34.86■■■■□ 3.17
RAB40C-211ENST00000568586 RIOX2Q8IUF8 465 aa34.86■■■■□ 3.17
RAB40C-211ENST00000568586 SLF1Q9BQI6 1058 aa34.86■■■■□ 3.17
RAB40C-211ENST00000568586 IL17RBQ9NRM6 502 aa34.86■■■■□ 3.17
RAB40C-211ENST00000568586 ZNF214Q9UL59 606 aaPredicted RBP34.86■■■■□ 3.17
RAB40C-211ENST00000568586 MYH4Q9Y623 1939 aa34.85■■■■□ 3.17
RAB40C-211ENST00000568586 RAD21O60216 631 aa34.85■■■■□ 3.17
RAB40C-211ENST00000568586 TFRCP02786 760 aaKnown RBP34.84■■■■□ 3.17
RAB40C-211ENST00000568586 PLS1Q14651 629 aa34.84■■■■□ 3.17
RAB40C-211ENST00000568586 PRPF38AQ8NAV1 312 aaKnown RBP34.84■■■■□ 3.17
RAB40C-211ENST00000568586 FLRT1Q9NZU1 646 aa34.84■■■■□ 3.17
RAB40C-211ENST00000568586 TSPY2A6NKD2 308 aa34.83■■■■□ 3.17
RAB40C-211ENST00000568586 ADORA2AP29274 412 aa34.83■■■■□ 3.17
RAB40C-211ENST00000568586 NPLOC4Q8TAT6 608 aa34.83■■■■□ 3.17
RAB40C-211ENST00000568586 FARP2O94887 1054 aaPredicted RBP34.82■■■■□ 3.16
RAB40C-211ENST00000568586 PCP11498 1178 aaKnown RBP34.82■■■■□ 3.16
RAB40C-211ENST00000568586 STAT3P40763 770 aa34.82■■■■□ 3.16
RAB40C-211ENST00000568586 NCAPG2Q86XI2 1143 aa34.82■■■■□ 3.16
RAB40C-211ENST00000568586 LRRC47Q8N1G4 583 aaKnown RBP34.82■■■■□ 3.16
RAB40C-211ENST00000568586 ANKLE1Q8NAG6 615 aa34.82■■■■□ 3.16
RAB40C-211ENST00000568586 DIAPH3Q9NSV4 1193 aa34.82■■■■□ 3.16
RAB40C-211ENST00000568586 ATP2A1O14983 1001 aa34.81■■■■□ 3.16
RAB40C-211ENST00000568586 COPB2P35606 906 aa34.81■■■■□ 3.16
RAB40C-211ENST00000568586 SLFN13Q68D06 897 aa34.81■■■■□ 3.16
RAB40C-211ENST00000568586 CWC27Q6UX04 472 aaKnown RBP34.81■■■■□ 3.16
RAB40C-211ENST00000568586 GMCL1Q96IK5 515 aa34.81■■■■□ 3.16
RAB40C-211ENST00000568586 FEM1BQ9UK73 627 aa34.81■■■■□ 3.16
RAB40C-211ENST00000568586 OGDHLQ9ULD0 1010 aa34.81■■■■□ 3.16
RAB40C-211ENST00000568586 RANBP6O60518 1105 aaKnown RBP34.8■■■■□ 3.16
RAB40C-211ENST00000568586 TTC22Q5TAA0 569 aa34.8■■■■□ 3.16
RAB40C-211ENST00000568586 MFSD14CQ5VZR4 134 aa34.8■■■■□ 3.16
RAB40C-211ENST00000568586 OLFML2BQ68BL8 750 aa34.8■■■■□ 3.16
RAB40C-211ENST00000568586 SAMD1Q6SPF0 538 aaPredicted RBP34.8■■■■□ 3.16
RAB40C-211ENST00000568586 NBPF3Q9H094 633 aa34.8■■■■□ 3.16
RAB40C-211ENST00000568586 TCP11L1Q9NUJ3 509 aa34.8■■■■□ 3.16
RAB40C-211ENST00000568586 COL11A1P12107 1806 aaPredicted RBP34.8■■■■□ 3.16
RAB40C-211ENST00000568586 COBLO75128 1261 aa34.79■■■■□ 3.16
RAB40C-211ENST00000568586 GSPT1P15170 499 aaKnown RBP34.79■■■■□ 3.16
RAB40C-211ENST00000568586 DPP9Q86TI2 863 aa34.79■■■■□ 3.16
RAB40C-211ENST00000568586 CEP290O15078 2479 aa34.78■■■■□ 3.16
RAB40C-211ENST00000568586 NMT2O60551 498 aa34.78■■■■□ 3.16
RAB40C-211ENST00000568586 FCER1AP12319 257 aa34.78■■■■□ 3.16
RAB40C-211ENST00000568586 BMP3P12645 472 aa34.78■■■■□ 3.16
RAB40C-211ENST00000568586 TEX13BQ9BXU2 312 aa34.78■■■■□ 3.16
RAB40C-211ENST00000568586 PLA2G6O60733 806 aa34.77■■■■□ 3.16
RAB40C-211ENST00000568586 STAG1Q8WVM7 1258 aa34.77■■■■□ 3.16
RAB40C-211ENST00000568586 SLC38A10Q9HBR0 1119 aa34.77■■■■□ 3.16
RAB40C-211ENST00000568586 SLC5A4Q9NY91 659 aa34.77■■■■□ 3.16
RAB40C-211ENST00000568586 STX8Q9UNK0 236 aa34.77■■■■□ 3.16
RAB40C-211ENST00000568586 CCND3P30281 292 aaPredicted RBP34.76■■■■□ 3.16
RAB40C-211ENST00000568586 MNX1P50219 401 aaPredicted RBP34.76■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms