RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 WDR46O15213 610 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 AKR1A1P14550 325 aa14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 PDE6AP16499 860 aa14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 GRIN2CQ14957 1233 aa14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 TMEM132BQ14DG7 1078 aa14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 SLC9C2Q5TAH2 1124 aa14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 AACSQ86V21 672 aa14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 ERC1Q8IUD2 1116 aa14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 DCP1AQ9NPI6 582 aaPredicted RBP14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 DIS3Q9Y2L1 958 aaKnown RBP14.28□□□□□ -0.12
GTF3C1-209ENST00000568569 PGK2P07205 417 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 KCTD2Q14681 263 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 ANKRD33Q7Z3H0 272 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 RIOX2Q8IUF8 465 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 CLEC10AQ8IUN9 316 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 SIAH1Q8IUQ4 282 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 FTSJ3Q8IY81 847 aaKnown RBP14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 USP38Q8NB14 1042 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 NUP133Q8WUM0 1156 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 CCDC17Q96LX7 622 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 TOX2Q96NM4 488 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 TSEN34Q9BSV6 310 aaKnown RBP14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 ZNF576Q9H609 170 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 STARD7Q9NQZ5 370 aa14.27□□□□□ -0.13
GTF3C1-209ENST00000568569 ZNF532Q9HCE3 1301 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 DCDC2CA8MYV0 355 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 ADAMTS4O75173 837 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 ZNF865P0CJ78 1059 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 CYP2D6P10635 497 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 AKR1B1P15121 316 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 COPB2P35606 906 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 FAAP100Q0VG06 881 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 ZNF792Q3KQV3 632 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 ITPRIPQ8IWB1 547 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 LENG1Q96BZ8 264 aaPredicted RBP14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 TIFAQ96CG3 184 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 DYNLL2Q96FJ2 89 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 ADAMTS5Q9UNA0 930 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 CNPY2Q9Y2B0 182 aa14.26□□□□□ -0.13
GTF3C1-209ENST00000568569 MOXD2PA6NHM9 499 aa14.25□□□□□ -0.13
GTF3C1-209ENST00000568569 TNFRSF10AO00220 468 aa14.25□□□□□ -0.13
GTF3C1-209ENST00000568569 TAL1P17542 331 aaPredicted RBP14.25□□□□□ -0.13
GTF3C1-209ENST00000568569 ACLYP53396 1101 aa14.25□□□□□ -0.13
GTF3C1-209ENST00000568569 CEP85Q6P2H3 762 aa14.25□□□□□ -0.13
GTF3C1-209ENST00000568569 LCORLQ8N3X6 602 aa14.25□□□□□ -0.13
GTF3C1-209ENST00000568569 FBXO28Q9NVF7 368 aa14.25□□□□□ -0.13
GTF3C1-209ENST00000568569 EXOC6BQ9Y2D4 811 aa14.25□□□□□ -0.13
GTF3C1-209ENST00000568569 NAV1Q8NEY1 1877 aa14.25□□□□□ -0.13
GTF3C1-209ENST00000568569 SYNRGQ9UMZ2 1314 aa14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 TCRBV5S4A2TA0A5A2 114 aa14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 VWA5AO00534 786 aa14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 TIMP1P01033 207 aa14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 STAT3P40763 770 aa14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 CCDC174Q6PII3 467 aa14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 AMOTL1Q8IY63 956 aa14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 MSL3Q8N5Y2 521 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 GOPCQ9HD26 462 aa14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 ZNF214Q9UL59 606 aaPredicted RBP14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 PPP1R9AQ9ULJ8 1098 aa14.24□□□□□ -0.13
GTF3C1-209ENST00000568569 MROH7Q68CQ1 1323 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 GOLIM4O00461 696 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 EEF2P13639 858 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 COL9A1P20849 921 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 HSP90AB4PQ58FF6 505 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 MFSD5Q6N075 450 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 KLHDC9Q8NEP7 349 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 ATXN2LQ8WWM7 1075 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 GAS2L1Q99501 681 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 DNAJC2Q99543 621 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.23□□□□□ -0.132e-11■■□□□ 13
GTF3C1-209ENST00000568569 ARMT1Q9H993 441 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 KANSL2Q9H9L4 492 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 IL1RAPL2Q9NP60 686 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 ATP8A2Q9NTI2 1148 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 TBX21Q9UL17 535 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 FAM184BQ9ULE4 1060 aa14.23□□□□□ -0.13
GTF3C1-209ENST00000568569 SYNGAP1Q96PV0 1343 aa14.22□□□□□ -0.13
GTF3C1-209ENST00000568569 CDK8P49336 464 aa14.22□□□□□ -0.13
GTF3C1-209ENST00000568569 PPIGQ13427 754 aaKnown RBP eCLIP14.22□□□□□ -0.136e-13■■□□□ 13.5
GTF3C1-209ENST00000568569 KCNA10Q16322 511 aa14.22□□□□□ -0.13
GTF3C1-209ENST00000568569 C12orf60Q5U649 245 aa14.22□□□□□ -0.13
GTF3C1-209ENST00000568569 REPS2Q8NFH8 660 aa14.22□□□□□ -0.13
GTF3C1-209ENST00000568569 GLT1D1Q96MS3 346 aa14.22□□□□□ -0.13
GTF3C1-209ENST00000568569 TEX13BQ9BXU2 312 aa14.22□□□□□ -0.13
GTF3C1-209ENST00000568569 ZHX1Q9UKY1 873 aaPredicted RBP14.22□□□□□ -0.13
GTF3C1-209ENST00000568569 ELP1O95163 1332 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 PRKAB2O43741 272 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 RAD21O60216 631 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 DUSP11O75319 330 aaKnown RBP14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 MBD4O95243 580 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 RLBP1P12271 317 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 CST5P28325 142 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 FAM83BQ5T0W9 1011 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 AKNAD1Q5T1N1 836 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 CCSAPQ6IQ19 270 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 MAMDC4Q6UXC1 1216 aa14.21□□□□□ -0.13
GTF3C1-209ENST00000568569 CCDC129Q6ZRS4 1044 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms