RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 GOLGA8AA7E2F4 631 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 FAM155AB1AL88 458 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 WDR46O15213 610 aaKnown RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 CD2BP2O95400 341 aaKnown RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 PARP1P09874 1014 aaKnown RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 SNHG28P0DPA3 235 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 CETPP11597 493 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 VCAM1P19320 739 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 PDIA3P30101 505 aaKnown RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 SLC1A4P43007 532 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 METAP2P50579 478 aaKnown RBP eCLIP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 RCAN1P53805 252 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 C1QTNF8P60827 252 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 TROAPQ12815 778 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 STK3Q13188 491 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 GRM1Q13255 1194 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 GRM4Q14833 912 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 CCDC96Q2M329 555 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 ASPRV1Q53RT3 343 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 FAM83BQ5T0W9 1011 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 CYP4F22Q6NT55 531 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 FASTKD5Q7L8L6 764 aaKnown RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 CCDC144CPQ8IYA2 1237 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 PROCA1Q8NCQ7 364 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 CTCFLQ8NI51 663 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 ZSCAN31Q96LW9 406 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 MAP3K14Q99558 947 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 NUP88Q99567 741 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 SLKQ9H2G2 1235 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 FRMPD2Q68DX3 1309 aaPredicted RBP8.96□□□□□ -0.98
SCAPER-221ENST00000568549 NID2Q14112 1375 aa8.96□□□□□ -0.98
SCAPER-221ENST00000568549 THSD7BQ9C0I4 1608 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 BAZ2BQ9UIF8 2168 aaKnown RBP8.95□□□□□ -0.98
SCAPER-221ENST00000568549 CCL15-CCL14A0A0B4J2E2 113 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 MANSC4A6NHS7 340 aaPredicted RBP8.95□□□□□ -0.98
SCAPER-221ENST00000568549 LARGE1O95461 756 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 GOLGA8HP0CJ92 632 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 BMP3P12645 472 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 HSPA6P17066 643 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 KIF5BP33176 963 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 CCT2P78371 535 aaKnown RBP8.95□□□□□ -0.98
SCAPER-221ENST00000568549 HTRA3P83110 453 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 ZNF543Q08ER8 600 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 IKQ13123 557 aaPredicted RBP8.95□□□□□ -0.98
SCAPER-221ENST00000568549 MOGSQ13724 837 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 CCL15Q16663 113 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 ME3Q16798 604 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 RTN1Q16799 776 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 GPATCH4Q5T3I0 446 aaKnown RBP8.95□□□□□ -0.98
SCAPER-221ENST00000568549 KCTD1Q719H9 257 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 HSCBQ8IWL3 235 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 FANCBQ8NB91 859 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 SNX21Q969T3 373 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 MS4A4AQ96JQ5 239 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 CAPNS2Q96L46 248 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 TANGO6Q9C0B7 1094 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 RPAP3Q9H6T3 665 aaPredicted RBP8.95□□□□□ -0.98
SCAPER-221ENST00000568549 GPCPD1Q9NPB8 672 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 SH2B1Q9NRF2 756 aaPredicted RBP8.95□□□□□ -0.98
SCAPER-221ENST00000568549 RBM28Q9NW13 759 aaKnown RBP8.95□□□□□ -0.98
SCAPER-221ENST00000568549 MAD2L2Q9UI95 211 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 AGTPBP1Q9UPW5 1226 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 HPS5Q9UPZ3 1129 aa8.95□□□□□ -0.98
SCAPER-221ENST00000568549 A0A0G2JMZ2 1700 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 CCDC196A0A1B0GTZ2 297 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 TESPA1A2RU30 521 aaPredicted RBP8.94□□□□□ -0.98
SCAPER-221ENST00000568549 PALM3A6NDB9 673 aaPredicted RBP8.94□□□□□ -0.98
SCAPER-221ENST00000568549 USP17L15C9J2P7 530 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 USP17L13C9JLJ4 530 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 TMEM232C9JQI7 657 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 USP17L11C9JVI0 530 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 KLRF2D3W0D1 207 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 USP17L18D6R9N7 530 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 USP17L22D6RA61 530 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 USP17L17D6RBQ6 530 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 USP17L19D6RCP7 530 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 USP17L20D6RJB6 530 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 PFKFB2O60825 505 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 CDC27P30260 824 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 GNAQP50148 359 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 STAT2P52630 851 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 USP17L24Q0WX57 530 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 SCRN1Q12765 414 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 SREBF2Q12772 1141 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 NOGQ13253 232 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 PABPC4Q13310 644 aaKnown RBP eCLIP8.94□□□□□ -0.98
SCAPER-221ENST00000568549 PPP2R5BQ15173 497 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 TREML2Q5T2D2 321 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 GPAT2Q6NUI2 795 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 STAG2Q8N3U4 1231 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 NECAB1Q8N987 351 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 BRI3BPQ8WY22 251 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 GTF3C6Q969F1 213 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 TMX3Q96JJ7 454 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 NCOA5Q9HCD5 579 aaKnown RBP8.94□□□□□ -0.98
SCAPER-221ENST00000568549 FEM1BQ9UK73 627 aa8.94□□□□□ -0.98
SCAPER-221ENST00000568549 BTBD19C9JJ37 291 aa8.93□□□□□ -0.98
SCAPER-221ENST00000568549 K7ELQ4 463 aaPredicted RBP8.93□□□□□ -0.98
SCAPER-221ENST00000568549 CPLX1O14810 134 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms