RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 RBBP6Q7Z6E9 1792 aaKnown RBP11.57□□□□□ -0.56
CLK3-220ENST00000567992 FLOT1O75955 427 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 PRKCZQ05513 592 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 SLFN13Q68D06 897 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 REPS2Q8NFH8 660 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 GPRC5AQ8NFJ5 357 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 ESR2Q92731 530 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 ATG4CQ96DT6 458 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 TMEM47Q9BQJ4 181 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 ZKSCAN3Q9BRR0 538 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 PAGR1Q9BTK6 254 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 PORCNQ9H237 461 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 ANO2Q9NQ90 1003 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 SRRDQ9UH36 339 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 PPP1R9AQ9ULJ8 1098 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 GABRQQ9UN88 632 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 PTCH2Q9Y6C5 1203 aa11.57□□□□□ -0.56
CLK3-220ENST00000567992 TNPO2O14787 897 aaKnown RBP11.56□□□□□ -0.56
CLK3-220ENST00000567992 RAD21O60216 631 aa11.56□□□□□ -0.56
CLK3-220ENST00000567992 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
CLK3-220ENST00000567992 COL9A3Q14050 684 aaPredicted RBP11.56□□□□□ -0.56
CLK3-220ENST00000567992 NECTIN1Q15223 517 aa11.56□□□□□ -0.56
CLK3-220ENST00000567992 PPP4R3BQ5MIZ7 849 aa11.56□□□□□ -0.56
CLK3-220ENST00000567992 CYB5R4Q7L1T6 521 aa11.56□□□□□ -0.56
CLK3-220ENST00000567992 GMCL1Q96IK5 515 aa11.56□□□□□ -0.56
CLK3-220ENST00000567992 HOXC10Q9NYD6 342 aa11.56□□□□□ -0.56
CLK3-220ENST00000567992 ZSWIM5Q9P217 1185 aa11.56□□□□□ -0.56
CLK3-220ENST00000567992 E7EWF7 191 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 SLC27A2O14975 620 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 TOP1P11387 765 aaKnown RBP11.55□□□□□ -0.56
CLK3-220ENST00000567992 BMP3P12645 472 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 PRMT2P55345 433 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 TMEM132BQ14DG7 1078 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 ARHGEF6Q15052 776 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 MB21D2Q8IYB1 491 aaPredicted RBP11.55□□□□□ -0.56
CLK3-220ENST00000567992 ENAHQ8N8S7 591 aaPredicted RBP11.55□□□□□ -0.56
CLK3-220ENST00000567992 ANKS1AQ92625 1134 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 ARMC5Q96C12 935 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 TTC14Q96N46 770 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 SLF1Q9BQI6 1058 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 KRT23Q9C075 422 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 CNNM2Q9H8M5 875 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 GJD2Q9UKL4 321 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 ZNF214Q9UL59 606 aaPredicted RBP11.55□□□□□ -0.56
CLK3-220ENST00000567992 TNKSO95271 1327 aa11.55□□□□□ -0.56
CLK3-220ENST00000567992 VWA5AO00534 786 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 SNHG28P0DPA3 235 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 MCCP23508 829 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 FLT3LGP49771 235 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 ANTXR2P58335 489 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 SEC23AQ15436 765 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 CREB3L3Q68CJ9 461 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 CASC1Q6TDU7 716 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 GPR142Q7Z601 462 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 DGKHQ86XP1 1220 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 MB21D1Q8N884 522 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 DCAF4Q8WV16 495 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 USP6NLQ92738 828 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 CHMP4CQ96CF2 233 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 ZSCAN10Q96SZ4 725 aaPredicted RBP11.54□□□□□ -0.56
CLK3-220ENST00000567992 MOV10L1Q9BXT6 1211 aaKnown RBP11.54□□□□□ -0.56
CLK3-220ENST00000567992 SPATC1LQ9H0A9 340 aa11.54□□□□□ -0.56
CLK3-220ENST00000567992 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 PLA2G6O60733 806 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 PDHBP11177 359 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 HOXD10P28358 340 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 MAPK4P31152 587 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 SLC1A4P43007 532 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 IRF5Q13568 498 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 MORN1Q5T089 497 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 SAMD1Q6SPF0 538 aaPredicted RBP11.53□□□□□ -0.56
CLK3-220ENST00000567992 KCTD1Q719H9 257 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 IQCA1Q86XH1 822 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 SHCBP1Q8NEM2 672 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 COA7Q96BR5 231 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 SLC38A10Q9HBR0 1119 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 SENP2Q9HC62 589 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 FEM1BQ9UK73 627 aa11.53□□□□□ -0.56
CLK3-220ENST00000567992 TNRC18O15417 2968 aaPredicted RBP11.52□□□□□ -0.57
CLK3-220ENST00000567992 ERCC3P19447 782 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 STAT2P52630 851 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 CCNA1P78396 465 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 GRB14Q14449 540 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 IFFO2Q5TF58 517 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 TTBK2Q6IQ55 1244 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 BTNL9Q6UXG8 535 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 PLEKHH3Q7Z736 793 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 RASEFQ8IZ41 740 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 PRPF38AQ8NAV1 312 aaKnown RBP11.52□□□□□ -0.57
CLK3-220ENST00000567992 PNMA1Q8ND90 353 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 NCOA7Q8NI08 942 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 SH3TC2Q8TF17 1288 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 KIFC2Q96AC6 838 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 ZNF333Q96JL9 665 aa11.52□□□□□ -0.57
CLK3-220ENST00000567992 PLXNA1Q9UIW2 1896 aa11.51□□□□□ -0.57
CLK3-220ENST00000567992 ZNFX1Q9P2E3 1918 aaKnown RBP11.51□□□□□ -0.57
CLK3-220ENST00000567992 ATP2A1O14983 1001 aa11.51□□□□□ -0.57
CLK3-220ENST00000567992 ELNP15502 786 aa11.51□□□□□ -0.57
CLK3-220ENST00000567992 PTPREP23469 700 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms