RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 IQGAP3Q86VI3 1631 aa7.07□□□□□ -1.28
CAPN3-217ENST00000567817 PRAG1Q86YV5 1406 aa7.07□□□□□ -1.28
CAPN3-217ENST00000567817 GLI3P10071 1580 aa7.07□□□□□ -1.28
CAPN3-217ENST00000567817 NUP155O75694 1391 aa7.07□□□□□ -1.28
CAPN3-217ENST00000567817 MYO5BQ9ULV0 1848 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 DCDC2CA8MYV0 355 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 FANCGO15287 622 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 MED26O95402 600 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 ZNF326Q5BKZ1 582 aaKnown RBP7.06□□□□□ -1.28
CAPN3-217ENST00000567817 PPM1JQ5JR12 505 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 DUSP27Q5VZP5 1158 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 OGFOD3Q6PK18 319 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 KRT27Q7Z3Y8 459 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 DTX1Q86Y01 620 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 ELMO3Q96BJ8 720 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 HIRIP3Q9BW71 556 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-217ENST00000567817 BCL11AQ9H165 835 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 PRKRIP1Q9H875 184 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-217ENST00000567817 ADGRB2O60241 1585 aa7.06□□□□□ -1.28
CAPN3-217ENST00000567817 RGPD1P0DJD0 1748 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 NALCNQ8IZF0 1738 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 NTF4P34130 210 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 VPS72Q15906 364 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 ZNF765Q7L2R6 523 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 GIPC2Q8TF65 315 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 LGR6Q9HBX8 967 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 SSU72Q9NP77 194 aaKnown RBP7.05□□□□□ -1.28
CAPN3-217ENST00000567817 PICK1Q9NRD5 415 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 CSADQ9Y600 493 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 USP47Q96K76 1375 aa7.05□□□□□ -1.28
CAPN3-217ENST00000567817 KIF7Q2M1P5 1343 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 ZBED9Q6R2W3 1325 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 CYP26A1O43174 497 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 HOXA10P31260 410 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-217ENST00000567817 PTPN11Q06124 597 aaPredicted RBP7.04□□□□□ -1.28
CAPN3-217ENST00000567817 CDK5R2Q13319 367 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 MAP3K11Q16584 847 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 MSMPQ1L6U9 139 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 NBPF8Q3BBV2 869 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 CYP27C1Q4G0S4 372 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 ZBTB37Q5TC79 503 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 LRFN4Q6PJG9 635 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 HDXQ7Z353 690 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 C12orf40Q86WS4 652 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.04□□□□□ -1.28
CAPN3-217ENST00000567817 KCT2Q8NC54 265 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 PLPPR2Q96GM1 343 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 SNCAIPQ9Y6H5 919 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 NWD2Q9ULI1 1742 aa7.04□□□□□ -1.28
CAPN3-217ENST00000567817 NRXN3Q9Y4C0 1643 aa7.03□□□□□ -1.28
CAPN3-217ENST00000567817 MFAP1P55081 439 aaKnown RBP7.03□□□□□ -1.28
CAPN3-217ENST00000567817 INPP5AQ14642 412 aa7.03□□□□□ -1.28
CAPN3-217ENST00000567817 WIPI1Q5MNZ9 446 aaPredicted RBP7.03□□□□□ -1.28
CAPN3-217ENST00000567817 CYFIP1Q7L576 1253 aa7.03□□□□□ -1.28
CAPN3-217ENST00000567817 DDX17Q92841 729 aaKnown RBP7.03□□□□□ -1.28
CAPN3-217ENST00000567817 PSMG3-AS1Q96PY0 264 aa7.03□□□□□ -1.28
CAPN3-217ENST00000567817 MIR1-1HGQ9H1L0 117 aa7.03□□□□□ -1.28
CAPN3-217ENST00000567817 PCDHB5Q9Y5E4 795 aa7.03□□□□□ -1.28
CAPN3-217ENST00000567817 BRWD3Q6RI45 1802 aa7.03□□□□□ -1.28
CAPN3-217ENST00000567817 PXDNQ92626 1479 aa7.03□□□□□ -1.28
CAPN3-217ENST00000567817 USP32Q8NFA0 1604 aa7.02□□□□□ -1.29
CAPN3-217ENST00000567817 PRAMEF27A3QJZ7 478 aa7.02□□□□□ -1.29
CAPN3-217ENST00000567817 FAM87AP0C7U9 286 aa7.02□□□□□ -1.29
CAPN3-217ENST00000567817 TFE3P19532 575 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-217ENST00000567817 SEPT6Q14141 434 aa7.02□□□□□ -1.29
CAPN3-217ENST00000567817 R3HDM1Q15032 1099 aaKnown RBP7.02□□□□□ -1.29
CAPN3-217ENST00000567817 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-217ENST00000567817 TACC3Q9Y6A5 838 aa7.02□□□□□ -1.29
CAPN3-217ENST00000567817 CDC42BPGQ6DT37 1551 aa7.02□□□□□ -1.29
CAPN3-217ENST00000567817 CCDC144AA2RUR9 1427 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 METP08581 1390 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 C1QTNF8P60827 252 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 PWP1Q13610 501 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 MRPL58Q14197 206 aaKnown RBP7.01□□□□□ -1.29
CAPN3-217ENST00000567817 CDC37L1Q7L3B6 337 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 PHC3Q8NDX5 983 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 ZNF507Q8TCN5 953 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 DUSP23Q9BVJ7 150 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 WNT10AQ9GZT5 417 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 PPP1R1BQ9UD71 204 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-217ENST00000567817 NEXMIFQ5QGS0 1516 aa7.01□□□□□ -1.29
CAPN3-217ENST00000567817 INSRP06213 1382 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 GPRASP1Q5JY77 1395 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 PRNPP04156 253 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 RALBP1Q15311 655 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 TSNAXIP1Q2TAA8 658 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 CCDC84Q86UT8 332 aaPredicted RBP7□□□□□ -1.29
CAPN3-217ENST00000567817 TOP6BLQ8N6T0 577 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 ORAI2Q96SN7 254 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 RSRP1Q9BUV0 290 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 CARD11Q9BXL7 1154 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 SPON1Q9HCB6 807 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 LRRC4CQ9HCJ2 640 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 TLR6Q9Y2C9 796 aa7□□□□□ -1.29
CAPN3-217ENST00000567817 LRIG2O94898 1065 aa6.99□□□□□ -1.29
CAPN3-217ENST00000567817 WNT11O96014 354 aa6.99□□□□□ -1.29
CAPN3-217ENST00000567817 LMNB2Q03252 620 aa6.99□□□□□ -1.29
CAPN3-217ENST00000567817 UBE3DQ7Z6J8 389 aa6.99□□□□□ -1.29
CAPN3-217ENST00000567817 VSIG10LQ86VR7 867 aa6.99□□□□□ -1.29
CAPN3-217ENST00000567817 MKNK2Q9HBH9 465 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms