RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 TRIM10Q9UDY6 481 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 MRFAP1Q9Y605 127 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 FAM169AQ9Y6X4 670 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
SIN3A-208ENST00000567289 KLHL30Q0D2K2 578 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 SLC9C1Q4G0N8 1177 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 EFCAB13Q8IY85 973 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 CCDC170Q8IYT3 715 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 TUBGCP2Q9BSJ2 902 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 TSGA10Q9BZW7 698 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 RIPOR2Q9Y4F9 1068 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 PPRC1Q5VV67 1664 aaKnown RBP13.03□□□□□ -0.32
SIN3A-208ENST00000567289 RTL9Q8NET4 1388 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 GLI2P10070 1586 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 TRIM49BA6NDI0 452 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 BACH1O14867 736 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 MOCS3O95396 460 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 BCAMP50895 628 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 KRT31Q15323 416 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 TADA2BQ86TJ2 420 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 CRACR2BQ8N4Y2 399 aaPredicted RBP13.03□□□□□ -0.32
SIN3A-208ENST00000567289 SPATA5Q8NB90 893 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 TCP11Q8WWU5 503 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 FERMT2Q96AC1 680 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 CCDC51Q96ER9 411 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 FTCDO95954 541 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 RPN1P04843 607 aaKnown RBP13.03□□□□□ -0.32
SIN3A-208ENST00000567289 GOLGA8HP0CJ92 632 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 FMR1Q06787 632 aaKnown RBP eCLIP13.03□□□□□ -0.32
SIN3A-208ENST00000567289 ACTN3Q08043 901 aaPredicted RBP13.03□□□□□ -0.32
SIN3A-208ENST00000567289 ADCY1Q08828 1119 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 IFI16Q16666 785 aaKnown RBP13.03□□□□□ -0.32
SIN3A-208ENST00000567289 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 FBXW10Q5XX13 1052 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 TRIM58Q8NG06 486 aa13.03□□□□□ -0.32
SIN3A-208ENST00000567289 ADGRB3O60242 1522 aa13.02□□□□□ -0.32
SIN3A-208ENST00000567289 PNPLA6Q8IY17 1366 aa13.02□□□□□ -0.32
SIN3A-208ENST00000567289 CYP2D7A0A087X1C5 515 aa13.02□□□□□ -0.32
SIN3A-208ENST00000567289 EIF4E1BA6NMX2 242 aaKnown RBP13.02□□□□□ -0.32
SIN3A-208ENST00000567289 MFAP3LO75121 409 aa13.02□□□□□ -0.32
SIN3A-208ENST00000567289 ABCB4P21439 1286 aa13.02□□□□□ -0.32
SIN3A-208ENST00000567289 OXER1Q8TDS5 423 aa13.02□□□□□ -0.32
SIN3A-208ENST00000567289 CCDC172P0C7W6 258 aa13.02□□□□□ -0.33
SIN3A-208ENST00000567289 CDC27P30260 824 aa13.02□□□□□ -0.33
SIN3A-208ENST00000567289 TECP42680 631 aa13.02□□□□□ -0.33
SIN3A-208ENST00000567289 PPARAQ07869 468 aa13.02□□□□□ -0.33
SIN3A-208ENST00000567289 EFCC1Q9HA90 598 aa13.02□□□□□ -0.33
SIN3A-208ENST00000567289 HEXIM1O94992 359 aaKnown RBP13.02□□□□□ -0.33
SIN3A-208ENST00000567289 TBC1D8O95759 1140 aa13.02□□□□□ -0.33
SIN3A-208ENST00000567289 ST3GAL1Q11201 340 aa13.02□□□□□ -0.33
SIN3A-208ENST00000567289 RPS6KA1Q15418 735 aa13.02□□□□□ -0.33
SIN3A-208ENST00000567289 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.33
SIN3A-208ENST00000567289 METTL16Q86W50 562 aaKnown RBP13.02□□□□□ -0.33
SIN3A-208ENST00000567289 ANKRD42Q8N9B4 389 aa13.02□□□□□ -0.33
SIN3A-208ENST00000567289 NOA1Q8NC60 698 aaKnown RBP13.02□□□□□ -0.33
SIN3A-208ENST00000567289 ADGRB1O14514 1584 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 SETBP1Q9Y6X0 1596 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 CALM1P0DP23 149 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 CALM2P0DP24 149 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 CALM3P0DP25 149 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 GNAT2P19087 354 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
SIN3A-208ENST00000567289 NNTQ13423 1086 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 CHP1Q99653 195 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 GREM2Q9H772 168 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 TFCP2L1Q9NZI6 479 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 NRXN1Q9ULB1 1477 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 CFAP74Q9C0B2 1584 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 UBE2Q2LH0YL09 131 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 DNM2P50570 870 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 TRIM68Q6AZZ1 485 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 CABP7Q86V35 215 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 C6orf50Q9HD87 102 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 TBCAO75347 108 aaKnown RBP13.01□□□□□ -0.33
SIN3A-208ENST00000567289 CTDNEP1O95476 244 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 GCKP35557 465 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 NFU1Q9UMS0 254 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 HYOU1Q9Y4L1 999 aa13.01□□□□□ -0.33
SIN3A-208ENST00000567289 CPSF1Q10570 1443 aaKnown RBP13.01□□□□□ -0.33
SIN3A-208ENST00000567289 ZNF185O15231 689 aa13□□□□□ -0.33
SIN3A-208ENST00000567289 LRRC41Q15345 812 aa13□□□□□ -0.33
SIN3A-208ENST00000567289 SMCR8Q8TEV9 937 aaPredicted RBP13□□□□□ -0.33
SIN3A-208ENST00000567289 NSRP1Q9H0G5 558 aaKnown RBP13□□□□□ -0.33
SIN3A-208ENST00000567289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13□□□□□ -0.33
SIN3A-208ENST00000567289 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
SIN3A-208ENST00000567289 PCK1P35558 622 aa13□□□□□ -0.33
SIN3A-208ENST00000567289 ZBTB16Q05516 673 aa13□□□□□ -0.33
SIN3A-208ENST00000567289 PUM3Q15397 648 aaKnown RBP13□□□□□ -0.33
SIN3A-208ENST00000567289 ZRSR2Q15696 482 aaKnown RBP13□□□□□ -0.33
SIN3A-208ENST00000567289 CYB5R4Q7L1T6 521 aa13□□□□□ -0.33
SIN3A-208ENST00000567289 SH2D3CQ8N5H7 860 aa13□□□□□ -0.33
SIN3A-208ENST00000567289 H7C1D1 291 aa13□□□□□ -0.33
SIN3A-208ENST00000567289 VPS41P49754 854 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms