RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 RBPJLQ9UBG7 517 aa30.7■■■□□ 2.51
NME3-209ENST00000566600 ERICH2A1L162 156 aa30.69■■■□□ 2.5
NME3-209ENST00000566600 GNRH1P01148 92 aa30.69■■■□□ 2.5
NME3-209ENST00000566600 DCAF4Q8WV16 495 aa30.69■■■□□ 2.5
NME3-209ENST00000566600 KAT14Q9H8E8 782 aa30.69■■■□□ 2.5
NME3-209ENST00000566600 FEM1BQ9UK73 627 aa30.69■■■□□ 2.5
NME3-209ENST00000566600 MCCP23508 829 aa30.68■■■□□ 2.5
NME3-209ENST00000566600 COL13A1Q5TAT6 717 aaPredicted RBP30.68■■■□□ 2.5
NME3-209ENST00000566600 MB21D2Q8IYB1 491 aaPredicted RBP30.68■■■□□ 2.5
NME3-209ENST00000566600 SLF1Q9BQI6 1058 aa30.68■■■□□ 2.5
NME3-209ENST00000566600 PAGR1Q9BTK6 254 aa30.68■■■□□ 2.5
NME3-209ENST00000566600 EFCC1Q9HA90 598 aa30.68■■■□□ 2.5
NME3-209ENST00000566600 MCM5P33992 734 aa30.67■■■□□ 2.5
NME3-209ENST00000566600 HSPA4P34932 840 aa30.67■■■□□ 2.5
NME3-209ENST00000566600 FCGRTP55899 365 aa30.67■■■□□ 2.5
NME3-209ENST00000566600 IFIT1BQ5T764 474 aaKnown RBP30.67■■■□□ 2.5
NME3-209ENST00000566600 PRPF38AQ8NAV1 312 aaKnown RBP30.67■■■□□ 2.5
NME3-209ENST00000566600 MTA3Q9BTC8 594 aa30.67■■■□□ 2.5
NME3-209ENST00000566600 PPP1R9AQ9ULJ8 1098 aa30.67■■■□□ 2.5
NME3-209ENST00000566600 ISY1Q9ULR0 285 aaKnown RBP30.67■■■□□ 2.5
NME3-209ENST00000566600 IFIT3O14879 490 aaKnown RBP30.66■■■□□ 2.5
NME3-209ENST00000566600 PSMC4P43686 418 aa30.66■■■□□ 2.5
NME3-209ENST00000566600 ERVK-9P63128 1117 aa30.66■■■□□ 2.5
NME3-209ENST00000566600 ERVK-24P63145 666 aa30.66■■■□□ 2.5
NME3-209ENST00000566600 CCNA1P78396 465 aa30.66■■■□□ 2.5
NME3-209ENST00000566600 PKN2Q16513 984 aaKnown RBP30.66■■■□□ 2.5
NME3-209ENST00000566600 CHURC1Q8WUH1 139 aa30.66■■■□□ 2.5
NME3-209ENST00000566600 KCNB2Q92953 911 aa30.66■■■□□ 2.5
NME3-209ENST00000566600 TXNRD2Q9NNW7 524 aa30.66■■■□□ 2.5
NME3-209ENST00000566600 FBXO28Q9NVF7 368 aa30.66■■■□□ 2.5
NME3-209ENST00000566600 RLFQ13129 1914 aa30.66■■■□□ 2.5
NME3-209ENST00000566600 FMNL1O95466 1100 aaPredicted RBP30.65■■■□□ 2.5
NME3-209ENST00000566600 SEC23AQ15436 765 aa30.65■■■□□ 2.5
NME3-209ENST00000566600 FAM160B2Q86V87 743 aa30.65■■■□□ 2.5
NME3-209ENST00000566600 PNMA1Q8ND90 353 aa30.65■■■□□ 2.5
NME3-209ENST00000566600 ADAMTS5Q9UNA0 930 aa30.65■■■□□ 2.5
NME3-209ENST00000566600 MTMR7Q9Y216 660 aa30.65■■■□□ 2.5
NME3-209ENST00000566600 TRIM17Q9Y577 477 aa30.65■■■□□ 2.5
NME3-209ENST00000566600 PARP14Q460N5 1801 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 TMEM232C9JQI7 657 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 PLA2G6O60733 806 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 HOXD10P28358 340 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 STAT2P52630 851 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 CCDC96Q2M329 555 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 SAMD1Q6SPF0 538 aaPredicted RBP30.64■■■□□ 2.5
NME3-209ENST00000566600 OTOP1Q7RTM1 612 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 RASEFQ8IZ41 740 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 ATG4CQ96DT6 458 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 NEK1Q96PY6 1258 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 USP26Q9BXU7 913 aa30.64■■■□□ 2.5
NME3-209ENST00000566600 POTEEQ6S8J3 1075 aa30.63■■■□□ 2.49
NME3-209ENST00000566600 CCAR1Q8IX12 1150 aaKnown RBP30.63■■■□□ 2.49
NME3-209ENST00000566600 ARHGAP39Q9C0H5 1083 aa30.63■■■□□ 2.49
NME3-209ENST00000566600 PRC1O43663 620 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 CNMDO75829 334 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 HMGB1P09429 215 aaKnown RBP30.62■■■□□ 2.49
NME3-209ENST00000566600 FDX1P10109 184 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 PDHBP11177 359 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 ANTXR2P58335 489 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 IKQ13123 557 aaPredicted RBP30.62■■■□□ 2.49
NME3-209ENST00000566600 WTAPQ15007 396 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 TMEM67Q5HYA8 995 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 KCTD1Q719H9 257 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 TMEM87BQ96K49 555 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 TRIM47Q96LD4 638 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 BTBD7Q9P203 1132 aa30.62■■■□□ 2.49
NME3-209ENST00000566600 A0A0G2JMZ2 1700 aa30.61■■■□□ 2.49
NME3-209ENST00000566600 VWA5AO00534 786 aa30.61■■■□□ 2.49
NME3-209ENST00000566600 TNPO2O14787 897 aaKnown RBP30.61■■■□□ 2.49
NME3-209ENST00000566600 SNHG28P0DPA3 235 aa30.61■■■□□ 2.49
NME3-209ENST00000566600 MAPK4P31152 587 aa30.61■■■□□ 2.49
NME3-209ENST00000566600 PRMT2P55345 433 aa30.61■■■□□ 2.49
NME3-209ENST00000566600 CHST3Q7LGC8 479 aa30.61■■■□□ 2.49
NME3-209ENST00000566600 KIFC2Q96AC6 838 aa30.61■■■□□ 2.49
NME3-209ENST00000566600 CTDP1Q9Y5B0 961 aaPredicted RBP30.61■■■□□ 2.49
NME3-209ENST00000566600 ZBED4O75132 1171 aa30.6■■■□□ 2.49
NME3-209ENST00000566600 Q3C1V9 767 aa30.6■■■□□ 2.49
NME3-209ENST00000566600 GPATCH4Q5T3I0 446 aaKnown RBP30.6■■■□□ 2.49
NME3-209ENST00000566600 TMTC2Q8N394 836 aa30.6■■■□□ 2.49
NME3-209ENST00000566600 IGDCC4Q8TDY8 1250 aa30.6■■■□□ 2.49
NME3-209ENST00000566600 COA7Q96BR5 231 aa30.6■■■□□ 2.49
NME3-209ENST00000566600 CHMP4CQ96CF2 233 aa30.6■■■□□ 2.49
NME3-209ENST00000566600 MGAMO43451 1857 aa30.59■■■□□ 2.49
NME3-209ENST00000566600 WDR19Q8NEZ3 1342 aa30.59■■■□□ 2.49
NME3-209ENST00000566600 PEX10O60683 326 aa30.59■■■□□ 2.49
NME3-209ENST00000566600 CTGFP29279 349 aa30.59■■■□□ 2.49
NME3-209ENST00000566600 CAP1Q01518 475 aa30.59■■■□□ 2.49
NME3-209ENST00000566600 ZNF543Q08ER8 600 aa30.59■■■□□ 2.49
NME3-209ENST00000566600 SPATC1LQ9H0A9 340 aa30.59■■■□□ 2.49
NME3-209ENST00000566600 SNX14Q9Y5W7 946 aa30.59■■■□□ 2.49
NME3-209ENST00000566600 ECM2O94769 699 aaPredicted RBP30.58■■■□□ 2.49
NME3-209ENST00000566600 DHX32Q7L7V1 743 aaKnown RBP30.58■■■□□ 2.49
NME3-209ENST00000566600 CWC22Q9HCG8 908 aaKnown RBP30.58■■■□□ 2.49
NME3-209ENST00000566600 PSMA5P28066 241 aa30.57■■■□□ 2.48
NME3-209ENST00000566600 PLS1Q14651 629 aa30.57■■■□□ 2.48
NME3-209ENST00000566600 ADCK5Q3MIX3 580 aa30.57■■■□□ 2.48
NME3-209ENST00000566600 FBXO46Q6PJ61 603 aaPredicted RBP30.57■■■□□ 2.48
NME3-209ENST00000566600 BTNL9Q6UXG8 535 aa30.57■■■□□ 2.48
NME3-209ENST00000566600 RASGRP2Q7LDG7 609 aa30.57■■■□□ 2.48
NME3-209ENST00000566600 SHCBP1Q8NEM2 672 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms