RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 SHCBP1Q8NEM2 672 aa15.02■□□□□ -0
LPCAT4-206ENST00000566581 SHISA4Q96DD7 197 aa15.02■□□□□ -0
LPCAT4-206ENST00000566581 CEP95Q96GE4 821 aa15.02■□□□□ -0
LPCAT4-206ENST00000566581 MOV10L1Q9BXT6 1211 aaKnown RBP15.02■□□□□ -0
LPCAT4-206ENST00000566581 SPATC1LQ9H0A9 340 aa15.02■□□□□ -0
LPCAT4-206ENST00000566581 PAK6Q9NQU5 681 aaPredicted RBP15.02■□□□□ -0
LPCAT4-206ENST00000566581 CLIP2Q9UDT6 1046 aa15.02■□□□□ -0
LPCAT4-206ENST00000566581 IVNS1ABPQ9Y6Y0 642 aa15.02■□□□□ -0
LPCAT4-206ENST00000566581 PLXNA1Q9UIW2 1896 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 CCDC171Q6TFL3 1326 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 RPTORQ8N122 1335 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 ORC4O43929 436 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 SGPL1O95470 568 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 TFAP4Q01664 338 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 MAP2K5Q13163 448 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 MAP3K21Q5TCX8 1036 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 ZNF589Q86UQ0 364 aaPredicted RBP15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 U2AF1L4Q8WU68 220 aaKnown RBP15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 TRIB2Q92519 343 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 ATG4CQ96DT6 458 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 APBA2Q99767 749 aa15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 CWC22Q9HCG8 908 aaKnown RBP15.01□□□□□ -0.01
LPCAT4-206ENST00000566581 HOXC6P09630 235 aa15□□□□□ -0.01
LPCAT4-206ENST00000566581 CTDSPL2Q05D32 466 aa15□□□□□ -0.01
LPCAT4-206ENST00000566581 GRB14Q14449 540 aa15□□□□□ -0.01
LPCAT4-206ENST00000566581 FAM83BQ5T0W9 1011 aa15□□□□□ -0.01
LPCAT4-206ENST00000566581 GMCL1P1Q8NEA9 526 aa15□□□□□ -0.01
LPCAT4-206ENST00000566581 MROH8Q9H579 483 aa15□□□□□ -0.01
LPCAT4-206ENST00000566581 HMX1Q9NP08 348 aaPredicted RBP15□□□□□ -0.01
LPCAT4-206ENST00000566581 FBXO28Q9NVF7 368 aa15□□□□□ -0.01
LPCAT4-206ENST00000566581 PPP1R9AQ9ULJ8 1098 aa15□□□□□ -0.01
LPCAT4-206ENST00000566581 LAMA4Q16363 1823 aa15□□□□□ -0.01
LPCAT4-206ENST00000566581 VWA5AO00534 786 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 NDUFB10O96000 172 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 ERCC3P19447 782 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 PDE4AP27815 886 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 FAM47AQ5JRC9 791 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 WDR78Q5VTH9 848 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 PRPF38BQ5VTL8 546 aaKnown RBP14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 UBE2Q1Q7Z7E8 422 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 ABRAQ8N0Z2 381 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 PRPF38AQ8NAV1 312 aaKnown RBP14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 CRISPLD2Q9H0B8 497 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 TACC3Q9Y6A5 838 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 DNAH12Q6ZR08 3092 aa14.99□□□□□ -0.01
LPCAT4-206ENST00000566581 TSPY2A6NKD2 308 aa14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 RAD21O60216 631 aa14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 SLC25A27O95847 323 aa14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 PCP11498 1178 aaKnown RBP14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 NOVP48745 357 aa14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 TMEM132BQ14DG7 1078 aa14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 CWC27Q6UX04 472 aaKnown RBP14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 DEFB118Q96PH6 123 aa14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 SLF1Q9BQI6 1058 aa14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 INCENPQ9NQS7 918 aa14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 IL17RBQ9NRM6 502 aa14.98□□□□□ -0.01
LPCAT4-206ENST00000566581 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 IGHA2P01877 340 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 TFRCP02786 760 aaKnown RBP14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 STAT3P40763 770 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 CACNB2Q08289 660 aaPredicted RBP14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 TRIM32Q13049 653 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 PLS1Q14651 629 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 CCL14Q16627 93 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 TTC22Q5TAA0 569 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 RIOX2Q8IUF8 465 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 REPS2Q8NFH8 660 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 NUP88Q99567 741 aaPredicted RBP14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 FEM1BQ9UK73 627 aa14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 ZNF214Q9UL59 606 aaPredicted RBP14.97□□□□□ -0.01
LPCAT4-206ENST00000566581 ATP2A1O14983 1001 aa14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 RANBP6O60518 1105 aaKnown RBP14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 PRKAR2AP13861 404 aaKnown RBP14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 ADORA2AP29274 412 aa14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 COPB2P35606 906 aa14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 NT5C2P49902 561 aa14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 NCAPG2Q86XI2 1143 aa14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 LRRC47Q8N1G4 583 aaKnown RBP14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 GMCL1Q96IK5 515 aa14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 DSCC1Q9BVC3 393 aa14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 TCP11L1Q9NUJ3 509 aa14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 SLC5A4Q9NY91 659 aa14.96□□□□□ -0.01
LPCAT4-206ENST00000566581 MCM3APO60318 1980 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 PLA2G6O60733 806 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 FDX1P10109 184 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 FCER1AP12319 257 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 BMP3P12645 472 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 GSPT1P15170 499 aaKnown RBP14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 AKNAD1Q5T1N1 836 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 MFSD14CQ5VZR4 134 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 OLFML2BQ68BL8 750 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 SLFN13Q68D06 897 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 MFSD6Q6ZSS7 791 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 DPP9Q86TI2 863 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 ANKLE1Q8NAG6 615 aa14.95□□□□□ -0.02
LPCAT4-206ENST00000566581 NPLOC4Q8TAT6 608 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms