RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 RBBP8NLQ8NC74 664 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 OR13H1Q8NG92 308 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 SHKBP1Q8TBC3 707 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 SLC7A3Q8WY07 619 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 EXOC2Q96KP1 924 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 MYRFLQ96LU7 910 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 CLUHP3Q96NS8 147 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 NSUN5Q96P11 429 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 FAM83CQ9BQN1 747 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 RUSC1Q9BVN2 902 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 RTFDC1Q9BY42 306 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 KCNF1Q9H3M0 494 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 PRDM10Q9NQV6 1147 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 TMEM39AQ9NV64 488 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 FAM86C1Q9NVL1 165 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 POLR3KQ9Y2Y1 108 aaPredicted RBP4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 SAMM50Q9Y512 469 aa4.25□□□□□ -1.73
HERPUD1-211ENST00000566550 A0A096LPE4 126 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 A0A1W2PPZ6 126 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 HMX2A2RU54 273 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 IQCA1LA6NCM1 817 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 GOLGA6CA6NDK9 693 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 GOLGA6BA6NDN3 693 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 VSTM5A8MXK1 200 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 WDR64B1ANS9 1081 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 J3QW42 95 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 AGRPO00253 132 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 MAFGO15525 162 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 KPNA6O60684 536 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 EGFRP00533 1210 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 NBPF7P0C2Y1 421 aaPredicted RBP4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 GOLGA6DP0CG33 693 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 ITPKAP23677 461 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 NEK4P51957 841 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 PPP2R3AQ06190 1150 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 TCIRG1Q13488 830 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 NCAPHQ15003 741 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 VPS72Q15906 364 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 ZYXQ15942 572 aaKnown RBP4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 DUOXA2Q1HG44 320 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 GRAMD1BQ3KR37 738 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 SV2CQ496J9 727 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 YOD1Q5VVQ6 348 aaPredicted RBP4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 IL31Q6EBC2 164 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 LLGL2Q6P1M3 1020 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 CLEC4GQ6UXB4 293 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 PASD1Q8IV76 773 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 SULF2Q8IWU5 870 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 TP53INP2Q8IXH6 220 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 ABI1Q8IZP0 508 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 VPS37AQ8NEZ2 397 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 GRIN3AQ8TCU5 1115 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 COG1Q8WTW3 980 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 PPM1EQ8WY54 764 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 PPP1R14AQ96A00 147 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 E2F7Q96AV8 911 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 ZNF669Q96BR6 464 aaPredicted RBP4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 SLC39A13Q96H72 371 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 SCYL1Q96KG9 808 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 ZNF512BQ96KM6 892 aaPredicted RBP4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 KIF2CQ99661 725 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 CDH19Q9H159 772 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 ZNF576Q9H609 170 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 GOLGA6AQ9NYA3 693 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 PIM2Q9P1W9 311 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 TRHDEQ9UKU6 1024 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 MRPS23Q9Y3D9 190 aaKnown RBP4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 DAAM1Q9Y4D1 1078 aa4.24□□□□□ -1.73
HERPUD1-211ENST00000566550 PLD2O14939 933 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 RFPL3O75679 317 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 CD53P19397 219 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 NEK3P51956 506 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 HYAL2Q12891 473 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 STAT4Q14765 748 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 GFOD2Q3B7J2 385 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 PKN3Q6P5Z2 889 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 BEND4Q6ZU67 534 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 FAM20CQ8IXL6 584 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 TMEM40Q8WWA1 233 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 GAL3ST3Q96A11 431 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 CHMP4CQ96CF2 233 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 TIFAQ96CG3 184 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 FAM46AQ96IP4 442 aaKnown RBP4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 TM9SF2Q99805 663 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 PTPRHQ9HD43 1115 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 LRP2BPQ9P2M1 347 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 IP6K2Q9UHH9 426 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 TAGLN3Q9UI15 199 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 HIF3AQ9Y2N7 669 aa4.23□□□□□ -1.73
HERPUD1-211ENST00000566550 DNAJC25-GNG10A0A024R161 153 aa4.22□□□□□ -1.73
HERPUD1-211ENST00000566550 TRBV23-1A0A0A0MS06 115 aa4.22□□□□□ -1.73
HERPUD1-211ENST00000566550 TRAV20A0A0B4J274 112 aa4.22□□□□□ -1.73
HERPUD1-211ENST00000566550 BMP3P12645 472 aa4.22□□□□□ -1.73
HERPUD1-211ENST00000566550 ZSCAN20P17040 1043 aaPredicted RBP4.22□□□□□ -1.73
HERPUD1-211ENST00000566550 NME2P22392 152 aa4.22□□□□□ -1.73
HERPUD1-211ENST00000566550 SOX18P35713 384 aa4.22□□□□□ -1.73
HERPUD1-211ENST00000566550 CDK8P49336 464 aa4.22□□□□□ -1.73
HERPUD1-211ENST00000566550 SETQ01105 290 aaPredicted RBP4.22□□□□□ -1.73
HERPUD1-211ENST00000566550 RPL6Q02878 288 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms