RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 LIFRP42702 1097 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 INHBEP58166 350 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 TROAPQ12815 778 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 TOB2Q14106 344 aaPredicted RBP9.58□□□□□ -0.88
CDH13-208ENST00000566333 WTAPQ15007 396 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 SART3Q15020 963 aaKnown RBP9.58□□□□□ -0.88
CDH13-208ENST00000566333 CCDC178Q5BJE1 867 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 FAM83BQ5T0W9 1011 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 RUFY3Q7L099 469 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 REM2Q8IYK8 340 aaPredicted RBP9.58□□□□□ -0.88
CDH13-208ENST00000566333 CFHR5Q9BXR6 569 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 ASCC2Q9H1I8 757 aaPredicted RBP9.58□□□□□ -0.88
CDH13-208ENST00000566333 R3HDMLQ9H3Y0 253 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 KAT14Q9H8E8 782 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 FBXO28Q9NVF7 368 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 WBP1LQ9NX94 342 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 BRPF3Q9ULD4 1205 aa9.58□□□□□ -0.88
CDH13-208ENST00000566333 LRRC37A2A6NM11 1700 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 SPDYE16A6NNV3 312 aaPredicted RBP9.57□□□□□ -0.88
CDH13-208ENST00000566333 CYP2C8P10632 490 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 ZNF543Q08ER8 600 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 CRHR2Q13324 411 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 SLC35G1Q2M3R5 365 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 SLFN13Q68D06 897 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 APOA5Q6Q788 366 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 CATSPERGQ6ZRH7 1159 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 ZNF654Q8IZM8 581 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 DCAF4Q8WV16 495 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 PARK7Q99497 189 aaKnown RBP9.57□□□□□ -0.88
CDH13-208ENST00000566333 MYL10Q9BUA6 226 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 TANGO6Q9C0B7 1094 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 RNF186Q9NXI6 227 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 SAGE1Q9NXZ1 904 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 CYP46A1Q9Y6A2 500 aa9.57□□□□□ -0.88
CDH13-208ENST00000566333 FRMPD2Q68DX3 1309 aaPredicted RBP9.56□□□□□ -0.88
CDH13-208ENST00000566333 ERICH2A1L162 156 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 USP17L15C9J2P7 530 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 USP17L13C9JLJ4 530 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 USP17L11C9JVI0 530 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 USP17L18D6R9N7 530 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 USP17L22D6RA61 530 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 USP17L17D6RBQ6 530 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 USP17L19D6RCP7 530 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 USP17L20D6RJB6 530 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 CA12O43570 354 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 RAD21O60216 631 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 DDAH1O94760 285 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 BMP3P12645 472 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 SLC1A4P43007 532 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 EVCP57679 992 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 HERVK_113P62684 666 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 USP17L24Q0WX57 530 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 GRM4Q14833 912 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 TAF1CQ15572 869 aaPredicted RBP9.56□□□□□ -0.88
CDH13-208ENST00000566333 CCDC96Q2M329 555 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 LBX2Q6XYB7 198 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 Q6ZUG5 572 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 KCTD1Q719H9 257 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 RAB11FIP4Q86YS3 637 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 REPS2Q8NFH8 660 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 BRF1Q92994 677 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 CHMP4CQ96CF2 233 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 MAD2L2Q9UI95 211 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 HPS5Q9UPZ3 1129 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 MTMR7Q9Y216 660 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 MYPNQ86TC9 1320 aa9.56□□□□□ -0.88
CDH13-208ENST00000566333 MCM3APO60318 1980 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 KLF18A0A0U1RQI7 1052 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 TLR2O60603 784 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 PEX10O60683 326 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 CNMDO75829 334 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 FLOT1O75955 427 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 ALDH1A1P00352 501 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 GOLGA8HP0CJ92 632 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 BCRP11274 1271 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 RXRAP19793 462 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 IRX3P78415 501 aaPredicted RBP9.55□□□□□ -0.88
CDH13-208ENST00000566333 MAP2K1Q02750 393 aaPredicted RBP9.55□□□□□ -0.88
CDH13-208ENST00000566333 APOBRQ0VD83 1088 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 PABPC4Q13310 644 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDH13-208ENST00000566333 ASPRV1Q53RT3 343 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 TTBK2Q6IQ55 1244 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 BTNL9Q6UXG8 535 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 MICU3Q86XE3 530 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 STAG2Q8N3U4 1231 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 ATG4CQ96DT6 458 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 P2RX7Q99572 595 aaKnown RBP9.55□□□□□ -0.88
CDH13-208ENST00000566333 SLF1Q9BQI6 1058 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 CPVLQ9H3G5 476 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 UPF2Q9HAU5 1272 aaKnown RBP9.55□□□□□ -0.88
CDH13-208ENST00000566333 TXNRD2Q9NNW7 524 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 PDRG1Q9NUG6 133 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 PNMA3Q9UL41 463 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 PPP1R9AQ9ULJ8 1098 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 ADAMTS5Q9UNA0 930 aa9.55□□□□□ -0.88
CDH13-208ENST00000566333 PALM3A6NDB9 673 aaPredicted RBP9.54□□□□□ -0.88
CDH13-208ENST00000566333 CCDC69A6NI79 296 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 GOLGA8BA8MQT2 603 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 TMEM232C9JQI7 657 aa9.54□□□□□ -0.88
CDH13-208ENST00000566333 PLA2G6O60733 806 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms