RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 TMX2Q9Y320 296 aa16.19■□□□□ 0.18
COMMD4-214ENST00000566230 FCER1AP12319 257 aa16.18■□□□□ 0.18
COMMD4-214ENST00000566230 AKR1B1P15121 316 aa16.18■□□□□ 0.18
COMMD4-214ENST00000566230 TMEM132BQ14DG7 1078 aa16.18■□□□□ 0.18
COMMD4-214ENST00000566230 TTF1Q15361 905 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-214ENST00000566230 ERC1Q8IUD2 1116 aa16.18■□□□□ 0.18
COMMD4-214ENST00000566230 VCPKMTQ9H867 229 aa16.18■□□□□ 0.18
COMMD4-214ENST00000566230 ADAMTS5Q9UNA0 930 aa16.18■□□□□ 0.18
COMMD4-214ENST00000566230 MYO9BQ13459 2157 aa16.17■□□□□ 0.18
COMMD4-214ENST00000566230 PRKAB2O43741 272 aa16.17■□□□□ 0.18
COMMD4-214ENST00000566230 PGK2P07205 417 aa16.17■□□□□ 0.18
COMMD4-214ENST00000566230 TAL1P17542 331 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-214ENST00000566230 SLFNL1Q499Z3 407 aa16.17■□□□□ 0.18
COMMD4-214ENST00000566230 SAMD1Q6SPF0 538 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-214ENST00000566230 PANK1Q8TE04 598 aa16.17■□□□□ 0.18
COMMD4-214ENST00000566230 ARMT1Q9H993 441 aa16.17■□□□□ 0.18
COMMD4-214ENST00000566230 XPNPEP3Q9NQH7 507 aa16.17■□□□□ 0.18
COMMD4-214ENST00000566230 SWAP70Q9UH65 585 aa16.17■□□□□ 0.18
COMMD4-214ENST00000566230 TACC3Q9Y6A5 838 aa16.17■□□□□ 0.18
COMMD4-214ENST00000566230 GOLIM4O00461 696 aa16.16■□□□□ 0.18
COMMD4-214ENST00000566230 PGK1P00558 417 aa16.16■□□□□ 0.18
COMMD4-214ENST00000566230 ICA1Q05084 483 aa16.16■□□□□ 0.18
COMMD4-214ENST00000566230 RHPN1Q8TCX5 695 aa16.16■□□□□ 0.18
COMMD4-214ENST00000566230 TINF2Q9BSI4 451 aa16.16■□□□□ 0.18
COMMD4-214ENST00000566230 ARHGEF10LQ9HCE6 1279 aa16.16■□□□□ 0.18
COMMD4-214ENST00000566230 FBXO28Q9NVF7 368 aa16.16■□□□□ 0.18
COMMD4-214ENST00000566230 NRBP1Q9UHY1 535 aa16.16■□□□□ 0.18
COMMD4-214ENST00000566230 DDX19BQ9UMR2 479 aa16.16■□□□□ 0.18
COMMD4-214ENST00000566230 CYP2D7A0A087X1C5 515 aa16.15■□□□□ 0.18
COMMD4-214ENST00000566230 KIAA0355O15063 1070 aa16.15■□□□□ 0.18
COMMD4-214ENST00000566230 WDR46O15213 610 aaKnown RBP16.15■□□□□ 0.18
COMMD4-214ENST00000566230 SLC25A27O95847 323 aa16.15■□□□□ 0.18
COMMD4-214ENST00000566230 CLTBP09497 229 aa16.15■□□□□ 0.18
COMMD4-214ENST00000566230 ZNF865P0CJ78 1059 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-214ENST00000566230 RARBP10826 455 aa16.15■□□□□ 0.18
COMMD4-214ENST00000566230 ZNF792Q3KQV3 632 aa16.15■□□□□ 0.18
COMMD4-214ENST00000566230 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.15■□□□□ 0.18
COMMD4-214ENST00000566230 MMP19Q99542 508 aa16.15■□□□□ 0.18
COMMD4-214ENST00000566230 DNAJC2Q99543 621 aaKnown RBP16.15■□□□□ 0.18
COMMD4-214ENST00000566230 A0A1W2PQ45 241 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-214ENST00000566230 A0A1W2PQY0 241 aa16.14■□□□□ 0.17
COMMD4-214ENST00000566230 EEF2P13639 858 aaKnown RBP16.14■□□□□ 0.17
COMMD4-214ENST00000566230 CDK8P49336 464 aa16.14■□□□□ 0.17
COMMD4-214ENST00000566230 C12orf60Q5U649 245 aa16.14■□□□□ 0.17
COMMD4-214ENST00000566230 RIOX2Q8IUF8 465 aa16.14■□□□□ 0.17
COMMD4-214ENST00000566230 LENG1Q96BZ8 264 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-214ENST00000566230 RNPC3Q96LT9 517 aaKnown RBP16.14■□□□□ 0.17
COMMD4-214ENST00000566230 CCDC17Q96LX7 622 aa16.14■□□□□ 0.17
COMMD4-214ENST00000566230 SH2D4AQ9H788 454 aa16.14■□□□□ 0.17
COMMD4-214ENST00000566230 DIS3Q9Y2L1 958 aaKnown RBP16.14■□□□□ 0.17
COMMD4-214ENST00000566230 MYH7P12883 1935 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 MBD4O95243 580 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 FOSL2P15408 326 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 STAT3P40763 770 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 RNF180Q86T96 592 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 REPS2Q8NFH8 660 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 ATP8A2Q9NTI2 1148 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 ZNF214Q9UL59 606 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-214ENST00000566230 COG6Q9Y2V7 657 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 MCM3APO60318 1980 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 ROBO3Q96MS0 1386 aa16.13■□□□□ 0.17
COMMD4-214ENST00000566230 TMEM265A0A087WTH1 108 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 USP17L12C9JPN9 530 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 USP17L21D6R901 530 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 VWA5AO00534 786 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 PQBP1O60828 265 aaKnown RBP16.12■□□□□ 0.17
COMMD4-214ENST00000566230 ADAMTS4O75173 837 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 CHGBP05060 677 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 RAG1P15918 1043 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 ADD2P35612 726 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 FAAP100Q0VG06 881 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 HSP90AB4PQ58FF6 505 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 C16orf86Q6ZW13 317 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 PPP1R9AQ9ULJ8 1098 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 CHD9Q3L8U1 2897 aa16.12■□□□□ 0.17
COMMD4-214ENST00000566230 GREB1LQ9C091 1923 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-214ENST00000566230 APBB1O00213 710 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 AKR1A1P14550 325 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 FPGSQ05932 587 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 KCTD2Q14681 263 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 GRIN2CQ14957 1233 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 ANKRD33Q7Z3H0 272 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 CLASRPQ8N2M8 674 aaKnown RBP16.11■□□□□ 0.17
COMMD4-214ENST00000566230 TSEN34Q9BSV6 310 aaKnown RBP16.11■□□□□ 0.17
COMMD4-214ENST00000566230 PRDM6Q9NQX0 595 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 TMEM39AQ9NV64 488 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 PAG1Q9NWQ8 432 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 NCOR1O75376 2440 aa16.11■□□□□ 0.17
COMMD4-214ENST00000566230 SNAI1O95863 264 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-214ENST00000566230 ACLYP53396 1101 aa16.1■□□□□ 0.17
COMMD4-214ENST00000566230 FAM83BQ5T0W9 1011 aa16.1■□□□□ 0.17
COMMD4-214ENST00000566230 CCSAPQ6IQ19 270 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-214ENST00000566230 RPAP2Q8IXW5 612 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-214ENST00000566230 USP38Q8NB14 1042 aa16.1■□□□□ 0.17
COMMD4-214ENST00000566230 KLHDC9Q8NEP7 349 aa16.1■□□□□ 0.17
COMMD4-214ENST00000566230 KIF1BPQ96EK5 621 aa16.1■□□□□ 0.17
COMMD4-214ENST00000566230 TOX2Q96NM4 488 aa16.1■□□□□ 0.17
COMMD4-214ENST00000566230 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.1■□□□□ 0.17
COMMD4-214ENST00000566230 KANSL2Q9H9L4 492 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms