RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 ZNF526Q8TF50 670 aaPredicted RBP11.36□□□□□ -0.59
SF3B3-207ENST00000566095 C8orf76Q96K31 380 aa11.36□□□□□ -0.59
SF3B3-207ENST00000566095 SLC26A6Q9BXS9 759 aa11.36□□□□□ -0.59
SF3B3-207ENST00000566095 GLT8D2Q9H1C3 349 aa11.36□□□□□ -0.59
SF3B3-207ENST00000566095 NCOA5Q9HCD5 579 aaKnown RBP11.36□□□□□ -0.59
SF3B3-207ENST00000566095 FOXD4L1Q9NU39 408 aa11.36□□□□□ -0.59
SF3B3-207ENST00000566095 FEM1BQ9UK73 627 aa11.36□□□□□ -0.59
SF3B3-207ENST00000566095 MTMR7Q9Y216 660 aa11.36□□□□□ -0.59
SF3B3-207ENST00000566095 ZDHHC9Q9Y397 364 aa11.36□□□□□ -0.59
SF3B3-207ENST00000566095 CTDP1Q9Y5B0 961 aaPredicted RBP11.36□□□□□ -0.59
SF3B3-207ENST00000566095 MYH4Q9Y623 1939 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 F5H6K3 240 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 PLA2G6O60733 806 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 USP2O75604 605 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-207ENST00000566095 RXRAP19793 462 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 CALML3P27482 149 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 CDC27P30260 824 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 INPP5BP32019 993 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 ADD1P35611 737 aaKnown RBP11.35□□□□□ -0.59
SF3B3-207ENST00000566095 STAT2P52630 851 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 KLRC3Q07444 240 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 PABPC4Q13310 644 aaKnown RBP eCLIP11.35□□□□□ -0.59
SF3B3-207ENST00000566095 GNL2Q13823 731 aaKnown RBP11.35□□□□□ -0.59
SF3B3-207ENST00000566095 COL9A3Q14050 684 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-207ENST00000566095 GALNT17Q6IS24 598 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 SMC1BQ8NDV3 1235 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 NMRK2Q9NPI5 230 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 MAD2L2Q9UI95 211 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 PAPPA2Q9BXP8 1791 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 ATAD5Q96QE3 1844 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 ELP1O95163 1332 aa11.35□□□□□ -0.59
SF3B3-207ENST00000566095 MBD3O95983 291 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 NDUFB10O96000 172 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 F13A1P00488 732 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 BACE1P56817 501 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 VGLL4Q14135 290 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 PRAMEF18Q5VWM3 479 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 MAP1SQ66K74 1059 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-207ENST00000566095 RAB11FIP4Q86YS3 637 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 CDAN1Q8IWY9 1227 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 SLC10A4Q96EP9 437 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 DDX11Q96FC9 970 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 ALG1Q9BT22 464 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 SCAND2PQ9GZW5 306 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-207ENST00000566095 ZNF408Q9H9D4 720 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 GBA2Q9HCG7 927 aaPredicted RBP11.34□□□□□ -0.59
SF3B3-207ENST00000566095 SH3GLB2Q9NR46 395 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 SCAF8Q9UPN6 1271 aaKnown RBP11.34□□□□□ -0.59
SF3B3-207ENST00000566095 MTMR6Q9Y217 621 aa11.34□□□□□ -0.59
SF3B3-207ENST00000566095 POLR2AP24928 1970 aaKnown RBP11.34□□□□□ -0.59
SF3B3-207ENST00000566095 SSC5DA1L4H1 1573 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 VPS37CA5D8V6 355 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-207ENST00000566095 SPDYE5A6NIY4 337 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 CXCL11O14625 94 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 CELF2O95319 508 aaKnown RBP11.33□□□□□ -0.6
SF3B3-207ENST00000566095 SCG2P13521 617 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 PPIL2Q13356 520 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 PRKG1Q13976 671 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 NTRK3Q16288 839 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 KLHL40Q2TBA0 621 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 MCTP2Q6DN12 878 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 PPP1R18Q6NYC8 613 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 FASTKD5Q7L8L6 764 aaKnown RBP11.33□□□□□ -0.6
SF3B3-207ENST00000566095 NKX2-3Q8TAU0 364 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 BICD2Q8TD16 824 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 ZKSCAN4Q969J2 545 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-207ENST00000566095 C12orf42Q96LP6 360 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 ZHX2Q9Y6X8 837 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 MORC2Q9Y6X9 1032 aaPredicted RBP11.33□□□□□ -0.6
SF3B3-207ENST00000566095 CNTNAP5Q8WYK1 1306 aa11.33□□□□□ -0.6
SF3B3-207ENST00000566095 JAK2O60674 1132 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 PLEKHA8P1O95397 391 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 CTDNEP1O95476 244 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 GNA11P29992 359 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 SPP2Q13103 211 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 MTMR2Q13614 643 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 RRP1BQ14684 758 aaKnown RBP11.32□□□□□ -0.6
SF3B3-207ENST00000566095 PFKFB3Q16875 520 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-207ENST00000566095 SYDE2Q5VT97 1194 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 BTNL9Q6UXG8 535 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-207ENST00000566095 BRAPQ7Z569 592 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 CLEC10AQ8IUN9 316 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 PROCA1Q8NCQ7 364 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-207ENST00000566095 FBXO18Q8NFZ0 1043 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 GTF3C2Q8WUA4 911 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-207ENST00000566095 PHKBQ93100 1093 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 FAM217BQ9NTX9 383 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-207ENST00000566095 CFAP45Q9UL16 551 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 SNCAIPQ9Y6H5 919 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-207ENST00000566095 FRMPD2Q68DX3 1309 aaPredicted RBP11.32□□□□□ -0.6
SF3B3-207ENST00000566095 MYPNQ86TC9 1320 aa11.32□□□□□ -0.6
SF3B3-207ENST00000566095 PNMA6FA0A0J9YX94 578 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 TRIM75PA6NK02 468 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 TMEM232C9JQI7 657 aa11.31□□□□□ -0.6
SF3B3-207ENST00000566095 ZBTB5O15062 677 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms