RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TMTC1Q8IUR5 882 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 LRRC45Q96CN5 670 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 CCT8L2Q96SF2 557 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 IL1RAPL2Q9NP60 686 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 MAP3K13O43283 966 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SLC4A2P04920 1241 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SSBP05455 408 aaKnown RBP eCLIP3.24□□□□□ -1.89
CHD9-218ENST00000566029 MDH1P40925 334 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 ADAM9Q13443 819 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 TDRD12Q587J7 1177 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 ADGRB3O60242 1522 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 GOLGA6L7A0A1B0GV03 622 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 PPIP5K2O43314 1243 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SLC3A2P08195 630 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 PIP4K2BP78356 416 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 LMNB2Q03252 620 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SLC39A14Q15043 492 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SPRED3Q2MJR0 410 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 RASGRP2Q7LDG7 609 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 C11orf96Q7Z7L8 435 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SPZ1Q9BXG8 430 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 RIPOR2Q9Y4F9 1068 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SH2B2O14492 632 aaPredicted RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 SMIM24O75264 130 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 FMNL1O95466 1100 aaPredicted RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 FMR1Q06787 632 aaKnown RBP eCLIP3.24□□□□□ -1.898e-16■■■■■ 55.6
CHD9-218ENST00000566029 GLE1Q53GS7 698 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 ZNF569Q5MCW4 686 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 LINC00301Q8NCQ3 95 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 RUBCNQ92622 972 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 RBM33Q96EV2 1170 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 TCEANC2Q96MN5 208 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 C19orf44Q9H6X5 657 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 MAP3K15Q6ZN16 1313 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ENO4A6NNW6 628 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 DNM1LO00429 736 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SPTLC2O15270 562 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 GLRX3O76003 335 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 TCF3P15923 654 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ROR2Q01974 943 aaKnown RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 PRKG1Q13976 671 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SEPT6Q14141 434 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 MORC3Q14149 939 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 ADALQ6DHV7 355 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SLC4A10Q6U841 1118 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 SH2D3CQ8N5H7 860 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 EZH1Q92800 747 aaPredicted RBP3.24□□□□□ -1.89
CHD9-218ENST00000566029 C17orf75Q9HAS0 396 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 NEO1Q92859 1461 aa3.24□□□□□ -1.89
CHD9-218ENST00000566029 CTDNEP1O95476 244 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 PLCD1P51178 756 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 NCALDP61601 193 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 KIF23Q02241 960 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 DYNC1I2Q13409 638 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 SYNE3Q6ZMZ3 975 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ZNF572Q7Z3I7 529 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 MTRQ99707 1265 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CRACR2AQ9BSW2 395 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 LZTFL1Q9NQ48 299 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ANO9A1A5B4 782 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ABL1P00519 1130 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ZKSCAN1P17029 563 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 GNAQP50148 359 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 MYO1EQ12965 1108 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 SPTY2D1Q68D10 685 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 CCDC121Q6ZUS5 278 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 STOX1Q6ZVD7 989 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 GALNT15Q8N3T1 639 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 LLPHQ9BRT6 129 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 SLC12A6Q9UHW9 1150 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 SOWAHDA6NJG2 315 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 B4DLN1 442 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 COBLO75128 1261 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 BMP6P22004 513 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 ZNF268Q14587 947 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 SGSM1Q2NKQ1 1148 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 GABPB2Q8TAK5 448 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 FAM81AQ8TBF8 368 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 OSBPL7Q9BZF2 842 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.23□□□□□ -1.89
CHD9-218ENST00000566029 PRC1O43663 620 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CDC37Q16543 378 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 EMBQ6PCB8 327 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 MTHFD1LQ6UB35 978 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CRELD2Q6UXH1 353 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 GIGYF2Q6Y7W6 1299 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 NECTIN2Q92692 538 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 CYFIP2Q96F07 1278 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 SPAG5Q96R06 1193 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 DMGDHQ9UI17 866 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 TRPC6Q9Y210 931 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 STK24Q9Y6E0 443 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 TEX33O43247 280 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 PECAM1P16284 738 aaPredicted RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 PCSK2P16519 638 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 KRT32Q14532 448 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 RRS1Q15050 365 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 XPO6Q96QU8 1125 aaKnown RBP3.23□□□□□ -1.89
CHD9-218ENST00000566029 EPAS1Q99814 870 aa3.23□□□□□ -1.89
CHD9-218ENST00000566029 SIL1Q9H173 461 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 324.7 ms