RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 FAM160B2Q86V87 743 aa14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 CCAR1Q8IX12 1150 aaKnown RBP14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 ANKRD13CQ8N6S4 541 aa14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 KCNB2Q92953 911 aa14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 KAT14Q9H8E8 782 aa14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 EFCC1Q9HA90 598 aa14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 ADAMTS5Q9UNA0 930 aa14.78□□□□□ -0.04
SHCBP1-204ENST00000565887 HSPA4P34932 840 aa14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 FCGRTP55899 365 aa14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 KIAA1755Q5JYT7 1200 aa14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 FAM83BQ5T0W9 1011 aa14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 IFIT1BQ5T764 474 aaKnown RBP14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 LRRC47Q8N1G4 583 aaKnown RBP14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 TMEM87BQ96K49 555 aa14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 RBPJLQ9UBG7 517 aa14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 PPP1R9AQ9ULJ8 1098 aa14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.05
SHCBP1-204ENST00000565887 CASP8AP2Q9UKL3 1982 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 MYH4Q9Y623 1939 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 TNKSO95271 1327 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 WDR19Q8NEZ3 1342 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 SPDYE16A6NNV3 312 aaPredicted RBP14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 IFIT3O14879 490 aaKnown RBP14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 FMNL1O95466 1100 aaPredicted RBP14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 PSMA5P28066 241 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 MAPK4P31152 587 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 COPB2P35606 906 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 PSMC4P43686 418 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 STAT2P52630 851 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 ERVK-9P63128 1117 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 ERVK-24P63145 666 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 GPATCH4Q5T3I0 446 aaKnown RBP14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 ENAHQ8N8S7 591 aaPredicted RBP14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 COA7Q96BR5 231 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 NEK1Q96PY6 1258 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 SLF1Q9BQI6 1058 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 ZKSCAN3Q9BRR0 538 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 USP26Q9BXU7 913 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 PNMA2Q9UL42 364 aa14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 CTDP1Q9Y5B0 961 aaPredicted RBP14.76□□□□□ -0.05
SHCBP1-204ENST00000565887 ZBED4O75132 1171 aa14.75□□□□□ -0.05
SHCBP1-204ENST00000565887 SLC25A27O95847 323 aa14.75□□□□□ -0.05
SHCBP1-204ENST00000565887 WTAPQ15007 396 aa14.75□□□□□ -0.05
SHCBP1-204ENST00000565887 SEC23AQ15436 765 aa14.75□□□□□ -0.05
SHCBP1-204ENST00000565887 CYB5R4Q7L1T6 521 aa14.75□□□□□ -0.05
SHCBP1-204ENST00000565887 MB21D2Q8IYB1 491 aaPredicted RBP14.75□□□□□ -0.05
SHCBP1-204ENST00000565887 PNMA1Q8ND90 353 aa14.75□□□□□ -0.05
SHCBP1-204ENST00000565887 CD99L2Q8TCZ2 262 aa14.75□□□□□ -0.05
SHCBP1-204ENST00000565887 TMEM232C9JQI7 657 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 VWA5AO00534 786 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 STRNO43815 780 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 SNHG28P0DPA3 235 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 LIFRP42702 1097 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 OAZ1P54368 228 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 IKQ13123 557 aaPredicted RBP14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 TMEM67Q5HYA8 995 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 BTNL9Q6UXG8 535 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 STOX1Q6ZVD7 989 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 DHX32Q7L7V1 743 aaKnown RBP14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 SHCBP1Q8NEM2 672 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 IGDCC4Q8TDY8 1250 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 PAGR1Q9BTK6 254 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 ISY1Q9ULR0 285 aaKnown RBP14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 TRIM17Q9Y577 477 aa14.74□□□□□ -0.05
SHCBP1-204ENST00000565887 TNPO2O14787 897 aaKnown RBP14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 ATP2A1O14983 1001 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 PRC1O43663 620 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 PDHBP11177 359 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 CCDC96Q2M329 555 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 ASPRV1Q53RT3 343 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 FBXO46Q6PJ61 603 aaPredicted RBP14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 OTOP1Q7RTM1 612 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 CATIPQ7Z7H3 387 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 MAP3K14Q99558 947 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 NUP88Q99567 741 aaPredicted RBP14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 MROH8Q9H579 483 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 CWC22Q9HCG8 908 aaKnown RBP14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 TXNRD2Q9NNW7 524 aa14.73□□□□□ -0.05
SHCBP1-204ENST00000565887 PARP1P09874 1014 aaKnown RBP14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 CALM1P0DP23 149 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 CALM2P0DP24 149 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 CALM3P0DP25 149 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 STAT3P40763 770 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 Q3C1V9 767 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 COL13A1Q5TAT6 717 aaPredicted RBP14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 SYNE3Q6ZMZ3 975 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 RASEFQ8IZ41 740 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 KIFC2Q96AC6 838 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 ATG4CQ96DT6 458 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 TRIM47Q96LD4 638 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 SPATC1LQ9H0A9 340 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 SLC38A10Q9HBR0 1119 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 BTBD7Q9P203 1132 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 SRRDQ9UH36 339 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 PTPN22Q9Y2R2 807 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 TAF6LQ9Y6J9 622 aa14.72□□□□□ -0.05
SHCBP1-204ENST00000565887 CCDC69A6NI79 296 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 CNMDO75829 334 aa14.71□□□□□ -0.05
SHCBP1-204ENST00000565887 ANAPC15P60006 121 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms