RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TMEM201Q5SNT2 666 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.05□□□□□ -1.44
LINC00561-201ENST00000565815 CDH24Q86UP0 819 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 DZIP1LQ8IYY4 767 aaKnown RBP6.05□□□□□ -1.44
LINC00561-201ENST00000565815 SPATA32Q96LK8 384 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 MIPEPQ99797 713 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 CNNM2Q9H8M5 875 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 C1GALT1Q9NS00 363 aa6.05□□□□□ -1.44
LINC00561-201ENST00000565815 KIDINS220Q9ULH0 1771 aa6.04□□□□□ -1.44
LINC00561-201ENST00000565815 TBX1O43435 398 aa6.04□□□□□ -1.44
LINC00561-201ENST00000565815 GAS2O43903 313 aaKnown RBP6.04□□□□□ -1.44
LINC00561-201ENST00000565815 DIAPH1O60610 1272 aaKnown RBP6.04□□□□□ -1.44
LINC00561-201ENST00000565815 COL9A2Q14055 689 aaPredicted RBP6.04□□□□□ -1.44
LINC00561-201ENST00000565815 AFAP1Q8N556 730 aa6.04□□□□□ -1.44
LINC00561-201ENST00000565815 MYRFLQ96LU7 910 aa6.04□□□□□ -1.44
LINC00561-201ENST00000565815 PSMG3-AS1Q96PY0 264 aa6.04□□□□□ -1.44
LINC00561-201ENST00000565815 SART1O43290 800 aaKnown RBP6.04□□□□□ -1.44
LINC00561-201ENST00000565815 INSM1Q01101 510 aaPredicted RBP6.04□□□□□ -1.44
LINC00561-201ENST00000565815 PDE4BQ07343 736 aa6.04□□□□□ -1.44
LINC00561-201ENST00000565815 ANKRD34AQ69YU3 496 aa6.04□□□□□ -1.44
LINC00561-201ENST00000565815 SLFN12Q8IYM2 578 aa6.04□□□□□ -1.44
LINC00561-201ENST00000565815 RBBP8NLQ8NC74 664 aaPredicted RBP6.04□□□□□ -1.44
LINC00561-201ENST00000565815 ATXN3LQ9H3M9 355 aa6.04□□□□□ -1.44
LINC00561-201ENST00000565815 DNMT1P26358 1616 aaKnown RBP6.03□□□□□ -1.44
LINC00561-201ENST00000565815 USP11P51784 963 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 HID1Q8IV36 788 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 MRPL41Q8IXM3 137 aaKnown RBP6.03□□□□□ -1.44
LINC00561-201ENST00000565815 FAM177A1Q8N128 213 aaPredicted RBP6.03□□□□□ -1.44
LINC00561-201ENST00000565815 FBXL6Q8N531 539 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 DEPDC7Q96QD5 511 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 DNAJC7Q99615 494 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 HIRIP3Q9BW71 556 aaPredicted RBP6.03□□□□□ -1.44
LINC00561-201ENST00000565815 A2MP01023 1474 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 ADGBQ8N7X0 1667 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 SPAG9O60271 1321 aaKnown RBP6.03□□□□□ -1.44
LINC00561-201ENST00000565815 SPDYE3A6NKU9 549 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 CBFA2T2O43439 604 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 CDCP2Q5VXM1 449 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 VHLLQ6RSH7 139 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 LILRB2Q8N423 598 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 SCARF2Q96GP6 870 aaPredicted RBP6.03□□□□□ -1.44
LINC00561-201ENST00000565815 APEX2Q9UBZ4 518 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 STRIP2Q9ULQ0 834 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 PLXNC1O60486 1568 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 SAMD9LQ8IVG5 1584 aa6.03□□□□□ -1.44
LINC00561-201ENST00000565815 CDK13Q14004 1512 aaKnown RBP6.02□□□□□ -1.45
LINC00561-201ENST00000565815 RTEL1-TNFRSF6BF6WH68 1400 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 VWDEQ8N2E2 1590 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 LRRC9Q6ZRR7 1453 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 TNRQ92752 1358 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 WASH4PA8MWX3 477 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 SHOXO15266 292 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 MAP4P27816 1152 aaKnown RBP6.02□□□□□ -1.45
LINC00561-201ENST00000565815 AXDND1Q5T1B0 1012 aaPredicted RBP6.02□□□□□ -1.45
LINC00561-201ENST00000565815 KIAA1211LQ6NV74 962 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 SEZ6L2Q6UXD5 910 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 TXNRD3Q86VQ6 643 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 CDC42BPBQ9Y5S2 1711 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 NPHP4O75161 1426 aaPredicted RBP6.02□□□□□ -1.45
LINC00561-201ENST00000565815 CLTCQ00610 1675 aaKnown RBP6.02□□□□□ -1.45
LINC00561-201ENST00000565815 NFKBIBQ15653 356 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 YOD1Q5VVQ6 348 aaPredicted RBP6.02□□□□□ -1.45
LINC00561-201ENST00000565815 CDC37L1Q7L3B6 337 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 TOP6BLQ8N6T0 577 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 SSBP4Q9BWG4 385 aaPredicted RBP6.02□□□□□ -1.45
LINC00561-201ENST00000565815 KDM5DQ9BY66 1539 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 FAM135BQ49AJ0 1406 aa6.02□□□□□ -1.45
LINC00561-201ENST00000565815 SCARA3Q6AZY7 606 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 BEND4Q6ZU67 534 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 ADCY4Q8NFM4 1077 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 FGD4Q96M96 766 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 TM9SF2Q99805 663 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 MSRB2Q9Y3D2 182 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 ATP7AQ04656 1500 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 FAM170BA6NMN3 283 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 TNFRSF10CO14798 259 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 EPHX1P07099 455 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 ZNF765Q7L2R6 523 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 FAM178BQ8IXR5 827 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 PZPP20742 1482 aa6.01□□□□□ -1.45
LINC00561-201ENST00000565815 NEURL4Q96JN8 1562 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 APBA3O96018 575 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 GRIA2P42262 883 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 CASP7P55210 303 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 LETMD1Q6P1Q0 360 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 FAM20CQ8IXL6 584 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 FAM181AQ8N9Y4 354 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 DNAJB8Q8NHS0 232 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 ZNF507Q8TCN5 953 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 TP53INP1Q96A56 240 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 ARMC5Q96C12 935 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 MFSD14AQ96MC6 490 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 DUSP23Q9BVJ7 150 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 TPSG1Q9NRR2 321 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 ADAM30Q9UKF2 790 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 R3HCC1Q9Y3T6 440 aaKnown RBP6□□□□□ -1.45
LINC00561-201ENST00000565815 INO80Q9ULG1 1556 aaPredicted RBP6□□□□□ -1.45
LINC00561-201ENST00000565815 PLA2G4EQ3MJ16 856 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 GNPTABQ3T906 1256 aa6□□□□□ -1.45
LINC00561-201ENST00000565815 CYB5D2Q8WUJ1 264 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms