RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SIAH1Q8IUQ4 282 aa19.86■□□□□ 0.77
USB1-211ENST00000565662 SPICE1Q8N0Z3 855 aa19.86■□□□□ 0.77
USB1-211ENST00000565662 DEFB118Q96PH6 123 aa19.86■□□□□ 0.77
USB1-211ENST00000565662 MTMR4Q9NYA4 1195 aa19.86■□□□□ 0.77
USB1-211ENST00000565662 ADAMTS5Q9UNA0 930 aa19.86■□□□□ 0.77
USB1-211ENST00000565662 CTDP1Q9Y5B0 961 aaPredicted RBP19.86■□□□□ 0.77
USB1-211ENST00000565662 PRKAR2AP13861 404 aaKnown RBP19.85■□□□□ 0.77
USB1-211ENST00000565662 PRPF38AQ8NAV1 312 aaKnown RBP19.85■□□□□ 0.77
USB1-211ENST00000565662 SEC62Q99442 399 aaKnown RBP19.85■□□□□ 0.77
USB1-211ENST00000565662 SLF1Q9BQI6 1058 aa19.85■□□□□ 0.77
USB1-211ENST00000565662 MOV10L1Q9BXT6 1211 aaKnown RBP19.85■□□□□ 0.77
USB1-211ENST00000565662 SUPT16HQ9Y5B9 1047 aaKnown RBP19.85■□□□□ 0.77
USB1-211ENST00000565662 NR2E3Q9Y5X4 410 aa19.85■□□□□ 0.77
USB1-211ENST00000565662 CCDC171Q6TFL3 1326 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 TSPY2A6NKD2 308 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 F5H6K3 240 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 RAD21O60216 631 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 KLRC3Q07444 240 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 OLFML2BQ68BL8 750 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 B4GALNT3Q6L9W6 998 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 UBE2Q1Q7Z7E8 422 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 DPP9Q86TI2 863 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 RILPL2Q969X0 211 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 CEP95Q96GE4 821 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.84■□□□□ 0.77
USB1-211ENST00000565662 RNF41Q9H4P4 317 aaPredicted RBP19.84■□□□□ 0.77
USB1-211ENST00000565662 FEM1BQ9UK73 627 aa19.84■□□□□ 0.77
USB1-211ENST00000565662 ORC4O43929 436 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 FCER1AP12319 257 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 ERCC3P19447 782 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 OAZ1P54368 228 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 PLS1Q14651 629 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 NECAB2Q7Z6G3 386 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 RIOX2Q8IUF8 465 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 CLEC10AQ8IUN9 316 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 PLEKHM2Q8IWE5 1019 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 ATG4CQ96DT6 458 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 TEX13BQ9BXU2 312 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 DIAPH3Q9NSV4 1193 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 CLIP2Q9UDT6 1046 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 NRBP1Q9UHY1 535 aa19.83■□□□□ 0.77
USB1-211ENST00000565662 COL11A1P12107 1806 aaPredicted RBP19.83■□□□□ 0.76
USB1-211ENST00000565662 VWA5AO00534 786 aa19.82■□□□□ 0.76
USB1-211ENST00000565662 ATP2A1O14983 1001 aa19.82■□□□□ 0.76
USB1-211ENST00000565662 FAM83BQ5T0W9 1011 aa19.82■□□□□ 0.76
USB1-211ENST00000565662 FAM160B2Q86V87 743 aa19.82■□□□□ 0.76
USB1-211ENST00000565662 NCAPG2Q86XI2 1143 aa19.82■□□□□ 0.76
USB1-211ENST00000565662 FBXO40Q9UH90 709 aa19.82■□□□□ 0.76
USB1-211ENST00000565662 DIS3Q9Y2L1 958 aaKnown RBP19.82■□□□□ 0.76
USB1-211ENST00000565662 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.82■□□□□ 0.76
USB1-211ENST00000565662 ZBED4O75132 1171 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 NDUFB10O96000 172 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 ADORA2AP29274 412 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 STAT3P40763 770 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 TFAP4Q01664 338 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 KCTD2Q14681 263 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 POTEEQ6S8J3 1075 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 CHURC1Q8WUH1 139 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 GMCL1Q96IK5 515 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 OGDHLQ9ULD0 1010 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 LAMA4Q16363 1823 aa19.81■□□□□ 0.76
USB1-211ENST00000565662 A0A0D9SFI3 127 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 PLA2G6O60733 806 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 PRDM1O75626 825 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 IGHDP01880 384 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 FGRP09769 529 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 HSPD1P10809 573 aaKnown RBP19.8■□□□□ 0.76
USB1-211ENST00000565662 SDSP20132 328 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 STAT2P52630 851 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 CACNB2Q08289 660 aaPredicted RBP19.8■□□□□ 0.76
USB1-211ENST00000565662 CCDC178Q5BJE1 867 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 KIAA1755Q5JYT7 1200 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 RCSD1Q6JBY9 416 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 MSL3Q8N5Y2 521 aaKnown RBP19.8■□□□□ 0.76
USB1-211ENST00000565662 NBPF3Q9H094 633 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 PNMA2Q9UL42 364 aa19.8■□□□□ 0.76
USB1-211ENST00000565662 RAD50Q92878 1312 aa19.79■□□□□ 0.76
USB1-211ENST00000565662 SMIM22K7EJ46 135 aa19.79■□□□□ 0.76
USB1-211ENST00000565662 BMP3P12645 472 aa19.79■□□□□ 0.76
USB1-211ENST00000565662 NMIQ13287 307 aaPredicted RBP19.79■□□□□ 0.76
USB1-211ENST00000565662 TMEM132BQ14DG7 1078 aa19.79■□□□□ 0.76
USB1-211ENST00000565662 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.79■□□□□ 0.76
USB1-211ENST00000565662 STK11IPQ8N1F8 1099 aa19.79■□□□□ 0.76
USB1-211ENST00000565662 DPF3Q92784 378 aa19.79■□□□□ 0.76
USB1-211ENST00000565662 MMP19Q99542 508 aa19.79■□□□□ 0.76
USB1-211ENST00000565662 TCP11L1Q9NUJ3 509 aa19.79■□□□□ 0.76
USB1-211ENST00000565662 ZNF214Q9UL59 606 aaPredicted RBP19.79■□□□□ 0.76
USB1-211ENST00000565662 STX8Q9UNK0 236 aa19.79■□□□□ 0.76
USB1-211ENST00000565662 RANBP6O60518 1105 aaKnown RBP19.78■□□□□ 0.76
USB1-211ENST00000565662 FGAP02671 866 aa19.78■□□□□ 0.76
USB1-211ENST00000565662 SLC1A4P43007 532 aa19.78■□□□□ 0.76
USB1-211ENST00000565662 SLFN13Q68D06 897 aa19.78■□□□□ 0.76
USB1-211ENST00000565662 CCDC129Q6ZRS4 1044 aa19.78■□□□□ 0.76
USB1-211ENST00000565662 FAM227BQ96M60 508 aa19.78■□□□□ 0.76
USB1-211ENST00000565662 CTNNA3Q9UI47 895 aa19.78■□□□□ 0.76
USB1-211ENST00000565662 FRMPD3Q5JV73 1810 aa19.78■□□□□ 0.76
USB1-211ENST00000565662 MKI67P46013 3256 aaKnown RBP19.78■□□□□ 0.76
USB1-211ENST00000565662 PEX10O60683 326 aa19.77■□□□□ 0.76
USB1-211ENST00000565662 CHST13Q8NET6 341 aa19.77■□□□□ 0.76
USB1-211ENST00000565662 STAG1Q8WVM7 1258 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms