RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 GINM1Q9NU53 330 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 CLIP2Q9UDT6 1046 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 SYNPO2Q9UMS6 1093 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 MTMR6Q9Y217 621 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 SCN4AP35499 1836 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 MYH6P13533 1939 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 FDPSP14324 419 aaKnown RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 HIRAP54198 1017 aaPredicted RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 AKAP17AQ02040 695 aaKnown RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 TMTC3Q6ZXV5 915 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 USP50Q70EL3 339 aaPredicted RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 RNF26Q9BY78 433 aaPredicted RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 GGA3Q9NZ52 723 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 ASTN2O75129 1339 aaPredicted RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 VPS37CA5D8V6 355 aaPredicted RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 IQCA1LA6NCM1 817 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 PRPF3O43395 683 aaKnown RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 DEXIO95424 95 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 ICA1Q05084 483 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 SEPT2Q15019 361 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 NBPF11Q86T75 865 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 ZC3H15Q8WU90 426 aaKnown RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 PHKBQ93100 1093 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 DCPSQ96C86 337 aaKnown RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 C8orf76Q96K31 380 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 ZNF830Q96NB3 372 aaPredicted RBP10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 SLC26A6Q9BXS9 759 aa10.84□□□□□ -0.67
CNEP1R1-206ENST00000565556 ELP1O95163 1332 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 PALM3A6NDB9 673 aaPredicted RBP10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 DTNBO60941 627 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 GDF11O95390 407 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 GH2P01242 217 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 PARP1P09874 1014 aaKnown RBP10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 SLURP2P0DP57 97 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 SMARCA1P28370 1054 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 CAP2P40123 477 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 KRT85P78386 507 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 DNM1Q05193 864 aaKnown RBP10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 FUT2Q10981 343 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 SUPT20HL1Q3ZLR7 823 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 MIGA2Q7L4E1 593 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 ALG1Q9BT22 464 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 ARHGEF10LQ9HCE6 1279 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 MAD2L2Q9UI95 211 aa10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 POLR2AP24928 1970 aaKnown RBP10.83□□□□□ -0.68
CNEP1R1-206ENST00000565556 ASNSP08243 561 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 EEF2P13639 858 aaKnown RBP10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 GUCY1A2P33402 732 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 EPHX2P34913 555 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 PLCB2Q00722 1185 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 ATP2B2Q01814 1243 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 TRIM29Q14134 588 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 ASPRV1Q53RT3 343 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 CDAN1Q8IWY9 1227 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 SRBD1Q8N5C6 995 aaKnown RBP10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 FBXO18Q8NFZ0 1043 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 KIAA1524Q8TCG1 905 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 FAM200AQ8TCP9 573 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 ZNF341Q9BYN7 854 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 ZSCAN16Q9H4T2 348 aaPredicted RBP10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 ZBTB21Q9ULJ3 1066 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 WDR90Q96KV7 1748 aa10.82□□□□□ -0.68
CNEP1R1-206ENST00000565556 PHF20L1A8MW92 1017 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 KLRF2D3W0D1 207 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 CTNND1O60716 968 aaKnown RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 PLEKHA8P1O95397 391 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 SNHG28P0DPA3 235 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 PDHBP11177 359 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 XBP1P17861 261 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 RRP1BQ14684 758 aaKnown RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 MAP3K11Q16584 847 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 GPATCH4Q5T3I0 446 aaKnown RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 NBPF12Q5TAG4 269 aaPredicted RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 CDC37L1Q7L3B6 337 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 PNMA8AQ86V59 439 aaPredicted RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 SULF1Q8IWU6 871 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 LRRC47Q8N1G4 583 aaKnown RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 C17orf53Q8N3J3 647 aaPredicted RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 CCDC82Q8N4S0 544 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 GMCL1P1Q8NEA9 526 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 SPZ1Q9BXG8 430 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 NUP62CLQ9H1M0 184 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 SH2D4AQ9H788 454 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 SCAF8Q9UPN6 1271 aaKnown RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 V9GY48 417 aaPredicted RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 ATAD5Q96QE3 1844 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 CNTNAP5Q8WYK1 1306 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 PPFIA3O75145 1194 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 CLEC10AQ8IUN9 316 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 SIAH1Q8IUQ4 282 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 CMTR1Q8N1G2 835 aaKnown RBP10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 STAG2Q8N3U4 1231 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 DCAF4Q8WV16 495 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 PRDM4Q9UKN5 801 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 MTMR7Q9Y216 660 aa10.81□□□□□ -0.68
CNEP1R1-206ENST00000565556 USP17L5A8MUK1 530 aa10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 JAG1P78504 1218 aa10.8□□□□□ -0.68
CNEP1R1-206ENST00000565556 TYRO3Q06418 890 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms