RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 TDO2P48775 406 aa17.59■□□□□ 0.41
USB1-210ENST00000565151 CCNA1P78396 465 aa17.59■□□□□ 0.41
USB1-210ENST00000565151 FAM83BQ5T0W9 1011 aa17.59■□□□□ 0.41
USB1-210ENST00000565151 SMC5Q8IY18 1101 aa17.59■□□□□ 0.41
USB1-210ENST00000565151 DPF3Q92784 378 aa17.59■□□□□ 0.41
USB1-210ENST00000565151 NDUFB10O96000 172 aa17.58■□□□□ 0.4
USB1-210ENST00000565151 APPP05067 770 aa17.58■□□□□ 0.4
USB1-210ENST00000565151 GNAT2P19087 354 aa17.58■□□□□ 0.4
USB1-210ENST00000565151 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.4
USB1-210ENST00000565151 CCAR1Q8IX12 1150 aaKnown RBP17.58■□□□□ 0.4
USB1-210ENST00000565151 CEP95Q96GE4 821 aa17.58■□□□□ 0.4
USB1-210ENST00000565151 FAM227BQ96M60 508 aa17.58■□□□□ 0.4
USB1-210ENST00000565151 MKNK2Q9HBH9 465 aa17.58■□□□□ 0.4
USB1-210ENST00000565151 NYAP2Q9P242 653 aa17.58■□□□□ 0.4
USB1-210ENST00000565151 PFASO15067 1338 aa17.57■□□□□ 0.4
USB1-210ENST00000565151 ADORA2AP29274 412 aa17.57■□□□□ 0.4
USB1-210ENST00000565151 CYP2C19P33261 490 aa17.57■□□□□ 0.4
USB1-210ENST00000565151 FAM47AQ5JRC9 791 aa17.57■□□□□ 0.4
USB1-210ENST00000565151 SHCBP1Q8NEM2 672 aa17.57■□□□□ 0.4
USB1-210ENST00000565151 PRO3102Q9H379 93 aa17.57■□□□□ 0.4
USB1-210ENST00000565151 SH2D4AQ9H788 454 aa17.57■□□□□ 0.4
USB1-210ENST00000565151 ZNF214Q9UL59 606 aaPredicted RBP17.57■□□□□ 0.4
USB1-210ENST00000565151 PLIN4Q96Q06 1357 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 A0A0D9SFI3 127 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 F5H6K3 240 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 VWA5AO00534 786 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 KLRC3Q07444 240 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 PPARAQ07869 468 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 B4GALNT3Q6L9W6 998 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 TRMT44Q8IYL2 757 aaKnown RBP17.56■□□□□ 0.4
USB1-210ENST00000565151 ANKLE1Q8NAG6 615 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 MKL1Q969V6 931 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 CLIP2Q9UDT6 1046 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 PPP1R9AQ9ULJ8 1098 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.56■□□□□ 0.4
USB1-210ENST00000565151 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
USB1-210ENST00000565151 LCTP09848 1927 aa17.55■□□□□ 0.4
USB1-210ENST00000565151 CTDSPL2Q05D32 466 aa17.55■□□□□ 0.4
USB1-210ENST00000565151 PLS1Q14651 629 aa17.55■□□□□ 0.4
USB1-210ENST00000565151 MB21D1Q8N884 522 aa17.55■□□□□ 0.4
USB1-210ENST00000565151 NEDD1Q8NHV4 660 aa17.55■□□□□ 0.4
USB1-210ENST00000565151 EVI5LQ96CN4 794 aa17.55■□□□□ 0.4
USB1-210ENST00000565151 HTATIP2Q9BUP3 242 aa17.55■□□□□ 0.4
USB1-210ENST00000565151 MTMR4Q9NYA4 1195 aa17.55■□□□□ 0.4
USB1-210ENST00000565151 COL6A1P12109 1028 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 CHRDL2Q6WN34 429 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 RASGRP2Q7LDG7 609 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 NECAB2Q7Z6G3 386 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 ZNF589Q86UQ0 364 aaPredicted RBP17.54■□□□□ 0.4
USB1-210ENST00000565151 NCAPG2Q86XI2 1143 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 PLEKHM2Q8IWE5 1019 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 LRRC47Q8N1G4 583 aaKnown RBP17.54■□□□□ 0.4
USB1-210ENST00000565151 NAPBQ9H115 298 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 CWC22Q9HCG8 908 aaKnown RBP17.54■□□□□ 0.4
USB1-210ENST00000565151 GOPCQ9HD26 462 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 IL17RBQ9NRM6 502 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 RBM27Q9P2N5 1060 aaKnown RBP17.54■□□□□ 0.4
USB1-210ENST00000565151 RIPK3Q9Y572 518 aa17.54■□□□□ 0.4
USB1-210ENST00000565151 LAMA2P24043 3122 aaKnown RBP17.53■□□□□ 0.4
USB1-210ENST00000565151 STRNO43815 780 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 RAD21O60216 631 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 NMT2O60551 498 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 CAPN2P17655 700 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 FXR1P51114 621 aaKnown RBP eCLIP17.53■□□□□ 0.4
USB1-210ENST00000565151 TFAP4Q01664 338 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 NUCB1Q02818 461 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 LRRFIP1Q32MZ4 808 aaKnown RBP17.53■□□□□ 0.4
USB1-210ENST00000565151 PRAMEF19Q5SWL8 479 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 RIOX2Q8IUF8 465 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 ZNF444Q8N0Y2 327 aaPredicted RBP17.53■□□□□ 0.4
USB1-210ENST00000565151 MROH8Q9H579 483 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 SUPT16HQ9Y5B9 1047 aaKnown RBP17.53■□□□□ 0.4
USB1-210ENST00000565151 IVNS1ABPQ9Y6Y0 642 aa17.53■□□□□ 0.4
USB1-210ENST00000565151 CYBAP13498 195 aa17.52■□□□□ 0.4
USB1-210ENST00000565151 NMIQ13287 307 aaPredicted RBP17.52■□□□□ 0.4
USB1-210ENST00000565151 DPP9Q86TI2 863 aa17.52■□□□□ 0.4
USB1-210ENST00000565151 CHD1LQ86WJ1 897 aa17.52■□□□□ 0.4
USB1-210ENST00000565151 CHMP4CQ96CF2 233 aa17.52■□□□□ 0.4
USB1-210ENST00000565151 NACAP1Q9BZK3 213 aa17.52■□□□□ 0.4
USB1-210ENST00000565151 NBPF3Q9H094 633 aa17.52■□□□□ 0.4
USB1-210ENST00000565151 PGK2P07205 417 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 STAT3P40763 770 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 AAMPQ13685 434 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 ALX1Q15699 326 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 MFSD14CQ5VZR4 134 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 OLFML2BQ68BL8 750 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 ABRAQ8N0Z2 381 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 MAML3Q96JK9 1138 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 SLF1Q9BQI6 1058 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 RWDD1Q9H446 243 aaPredicted RBP17.51■□□□□ 0.39
USB1-210ENST00000565151 C11orf49Q9H6J7 331 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 HELLSQ9NRZ9 838 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 DDX20Q9UHI6 824 aaKnown RBP17.51■□□□□ 0.39
USB1-210ENST00000565151 ANAPC4Q9UJX5 808 aa17.51■□□□□ 0.39
USB1-210ENST00000565151 EVI5O60447 810 aa17.5■□□□□ 0.39
USB1-210ENST00000565151 TTLL1O95922 423 aa17.5■□□□□ 0.39
USB1-210ENST00000565151 FGAP02671 866 aa17.5■□□□□ 0.39
USB1-210ENST00000565151 FGRP09769 529 aa17.5■□□□□ 0.39
USB1-210ENST00000565151 NOVP48745 357 aa17.5■□□□□ 0.39
USB1-210ENST00000565151 ANO1Q5XXA6 986 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms