RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 CALB2P22676 271 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 MAGEA10P43363 369 aaPredicted RBP6.98□□□□□ -1.29
PTPN9-204ENST00000564970 CLCN2P51788 898 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 KLC1Q07866 573 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 NSUN2Q08J23 767 aaKnown RBP eCLIP6.98□□□□□ -1.29
PTPN9-204ENST00000564970 MAP3K12Q12852 859 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 TUBA3CQ13748 450 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 EIF4A2Q14240 407 aaKnown RBP6.98□□□□□ -1.29
PTPN9-204ENST00000564970 SPCS2Q15005 226 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 TMEM259Q4ZIN3 620 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 SLC44A4Q53GD3 710 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 ANKRD20A8PQ5CZ79 823 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 PPP1R15BQ5SWA1 713 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 ADALQ6DHV7 355 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 IRGCQ6NXR0 463 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 MAMSTRQ6ZN01 415 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 C3orf62Q6ZUJ4 267 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 NLRP9Q7RTR0 991 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 UBE2Q1Q7Z7E8 422 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 PHLDB2Q86SQ0 1253 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 ARHGEF25Q86VW2 580 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 PDCD7Q8N8D1 485 aaKnown RBP6.98□□□□□ -1.29
PTPN9-204ENST00000564970 LRRN4CLQ8ND94 238 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 NEK9Q8TD19 979 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 KIFAP3Q92845 792 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 HVCN1Q96D96 273 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 IFT74Q96LB3 600 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 FGD4Q96M96 766 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 NDNQ99608 321 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 NUP58Q9BVL2 599 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 OSBPL3Q9H4L5 887 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 TMEM165Q9HC07 324 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 TBC1D7Q9P0N9 293 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 SEPT10Q9P0V9 454 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 DSEQ9UL01 958 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
PTPN9-204ENST00000564970 TTC7AQ9ULT0 858 aaPredicted RBP6.98□□□□□ -1.29
PTPN9-204ENST00000564970 ATP1B4Q9UN42 357 aaPredicted RBP6.98□□□□□ -1.29
PTPN9-204ENST00000564970 IQSEC3Q9UPP2 1182 aaPredicted RBP6.98□□□□□ -1.29
PTPN9-204ENST00000564970 PPP2R2CQ9Y2T4 447 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 C2CD2Q9Y426 696 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 LRRC42Q9Y546 428 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 MYPNQ86TC9 1320 aa6.98□□□□□ -1.29
PTPN9-204ENST00000564970 CUL7Q14999 1698 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 FRMD3A2A2Y4 597 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 CTAGE9A4FU28 777 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 VWA3AA6NCI4 1184 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 IQCA1LA6NCM1 817 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 N4BP3O15049 544 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 FIBPO43427 364 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 SH3BP5O60239 455 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 MARCH6O60337 910 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 PFKFB2O60825 505 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 N4BP1O75113 896 aaKnown RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 SKAP2O75563 359 aaPredicted RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 TRIM27P14373 513 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ACADSP16219 412 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 TNFRSF8P28908 595 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ATICP31939 592 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 GBP1P32455 592 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 MLH1P40692 756 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ZNF131P52739 623 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 PMS2P54278 862 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ELF3P78545 371 aaPredicted RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ATP2B2Q01814 1243 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ARHGEF6Q15052 776 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 BCL2A1Q16548 175 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ZMYM1Q5SVZ6 1142 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ARMC3Q5W041 872 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 EMBQ6PCB8 327 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ERICH1Q86X53 443 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 CD302Q8IX05 232 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 PIP4P2Q8N4L2 257 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 RNF10Q8N5U6 811 aaKnown RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ANKS4BQ8N8V4 417 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 SCAIQ8N9R8 606 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 RETREG2Q8NC44 543 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 CCDC110Q8TBZ0 833 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ZNF473Q8WTR7 871 aaKnown RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 RRP36Q96EU6 259 aaKnown RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 MPP4Q96JB8 637 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 OLFM3Q96PB7 478 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 CTAGE1Q96RT6 745 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 OSBPL10Q9BXB5 764 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 PUS3Q9BZE2 481 aaKnown RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 RSPH9Q9H1X1 276 aaPredicted RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 RPAP3Q9H6T3 665 aaPredicted RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 RTEL1Q9NZ71 1219 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 SUCLA2Q9P2R7 463 aaPredicted RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ZMAT5Q9UDW3 170 aaKnown RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 PCSK1NQ9UHG2 260 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 HERC5Q9UII4 1024 aaKnown RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 SCOCQ9UIL1 159 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 CFAP45Q9UL16 551 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 FAM184BQ9ULE4 1060 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 LIMCH1Q9UPQ0 1083 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 R3HDM2Q9Y2K5 976 aaKnown RBP6.97□□□□□ -1.29
PTPN9-204ENST00000564970 ADGRL2O95490 1459 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 NCKAP5LQ9HCH0 1330 aa6.97□□□□□ -1.29
PTPN9-204ENST00000564970 PRAG1Q86YV5 1406 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms