RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 APPBP2Q92624 585 aa22.13■■□□□ 1.13
CLN6-204ENST00000564752 GOPCQ9HD26 462 aa22.13■■□□□ 1.13
CLN6-204ENST00000564752 ERC2O15083 957 aa22.12■■□□□ 1.13
CLN6-204ENST00000564752 SLC25A27O95847 323 aa22.12■■□□□ 1.13
CLN6-204ENST00000564752 ZFYP08048 801 aaPredicted RBP22.12■■□□□ 1.13
CLN6-204ENST00000564752 RASA1P20936 1047 aa22.12■■□□□ 1.13
CLN6-204ENST00000564752 SENP6Q9GZR1 1112 aaPredicted RBP22.12■■□□□ 1.13
CLN6-204ENST00000564752 FBXO28Q9NVF7 368 aa22.12■■□□□ 1.13
CLN6-204ENST00000564752 DNAH12Q6ZR08 3092 aa22.12■■□□□ 1.13
CLN6-204ENST00000564752 FCER1AP12319 257 aa22.11■■□□□ 1.13
CLN6-204ENST00000564752 HDAC1Q13547 482 aaPredicted RBP22.11■■□□□ 1.13
CLN6-204ENST00000564752 AAMPQ13685 434 aa22.11■■□□□ 1.13
CLN6-204ENST00000564752 MKNK2Q9HBH9 465 aa22.11■■□□□ 1.13
CLN6-204ENST00000564752 PPP1R9AQ9ULJ8 1098 aa22.11■■□□□ 1.13
CLN6-204ENST00000564752 MINDY4BA8MYZ0 360 aa22.1■■□□□ 1.13
CLN6-204ENST00000564752 DNM1LO00429 736 aa22.1■■□□□ 1.13
CLN6-204ENST00000564752 VWA5AO00534 786 aa22.1■■□□□ 1.13
CLN6-204ENST00000564752 GPAA1O43292 621 aa22.1■■□□□ 1.13
CLN6-204ENST00000564752 MX1P20591 662 aa22.1■■□□□ 1.13
CLN6-204ENST00000564752 RIOX2Q8IUF8 465 aa22.1■■□□□ 1.13
CLN6-204ENST00000564752 OTUD7AQ8TE49 926 aaPredicted RBP22.1■■□□□ 1.13
CLN6-204ENST00000564752 LRCH3Q96II8 777 aa22.1■■□□□ 1.13
CLN6-204ENST00000564752 MAML3Q96JK9 1138 aa22.1■■□□□ 1.13
CLN6-204ENST00000564752 NYAP2Q9P242 653 aa22.1■■□□□ 1.13
CLN6-204ENST00000564752 A0A0G2JMZ2 1700 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 SEPT4O43236 478 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 RAD21O60216 631 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 GNAT2P19087 354 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 STAT3P40763 770 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 FAM83BQ5T0W9 1011 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 ANKRD45Q5TZF3 282 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 STK11IPQ8N1F8 1099 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 ARRDC4Q8NCT1 418 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 EPB41L4AQ9HCS5 686 aaPredicted RBP22.09■■□□□ 1.13
CLN6-204ENST00000564752 ROBO3Q96MS0 1386 aa22.09■■□□□ 1.13
CLN6-204ENST00000564752 PATL2C9JE40 543 aaKnown RBP22.08■■□□□ 1.13
CLN6-204ENST00000564752 M0R2C6 588 aa22.08■■□□□ 1.13
CLN6-204ENST00000564752 LRRFIP1Q32MZ4 808 aaKnown RBP22.08■■□□□ 1.13
CLN6-204ENST00000564752 PRAMEF19Q5SWL8 479 aa22.08■■□□□ 1.13
CLN6-204ENST00000564752 SLC17A8Q8NDX2 589 aa22.08■■□□□ 1.13
CLN6-204ENST00000564752 REPS2Q8NFH8 660 aa22.08■■□□□ 1.13
CLN6-204ENST00000564752 PI4K2BQ8TCG2 481 aa22.08■■□□□ 1.13
CLN6-204ENST00000564752 ZNF214Q9UL59 606 aaPredicted RBP22.08■■□□□ 1.13
CLN6-204ENST00000564752 ZNF236Q9UL36 1845 aa22.08■■□□□ 1.12
CLN6-204ENST00000564752 LRIT3Q3SXY7 679 aa22.07■■□□□ 1.12
CLN6-204ENST00000564752 GJC2Q5T442 439 aaPredicted RBP22.07■■□□□ 1.12
CLN6-204ENST00000564752 TDHQ8IZJ6 230 aa22.07■■□□□ 1.12
CLN6-204ENST00000564752 MMP19Q99542 508 aa22.07■■□□□ 1.12
CLN6-204ENST00000564752 UBE2OQ9C0C9 1292 aaKnown RBP22.07■■□□□ 1.12
CLN6-204ENST00000564752 IGKV6D-41A0A0C4DH26 115 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 F5H6K3 240 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 APPP05067 770 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 TDO2P48775 406 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 ATN1P54259 1190 aaPredicted RBP22.06■■□□□ 1.12
CLN6-204ENST00000564752 KLRC3Q07444 240 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 ANO1Q5XXA6 986 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 IFNL3Q8IZI9 196 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 ZNF287Q9HBT7 754 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 CLIP2Q9UDT6 1046 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 COL6A3P12111 3177 aa22.06■■□□□ 1.12
CLN6-204ENST00000564752 PGK2P07205 417 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 COPB2P35606 906 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 KCTD2Q14681 263 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 ZNF792Q3KQV3 632 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 GPR153Q6NV75 609 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 ZNF444Q8N0Y2 327 aaPredicted RBP22.05■■□□□ 1.12
CLN6-204ENST00000564752 MKL1Q969V6 931 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 NUP88Q99567 741 aaPredicted RBP22.05■■□□□ 1.12
CLN6-204ENST00000564752 SLF1Q9BQI6 1058 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 FSD1Q9BTV5 496 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 NRBP1Q9UHY1 535 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 DIS3Q9Y2L1 958 aaKnown RBP22.05■■□□□ 1.12
CLN6-204ENST00000564752 SALL3Q9BXA9 1300 aa22.05■■□□□ 1.12
CLN6-204ENST00000564752 PRDM1O75626 825 aa22.04■■□□□ 1.12
CLN6-204ENST00000564752 NDUFB10O96000 172 aa22.04■■□□□ 1.12
CLN6-204ENST00000564752 EXOC6Q8TAG9 804 aa22.04■■□□□ 1.12
CLN6-204ENST00000564752 SEC62Q99442 399 aaKnown RBP22.04■■□□□ 1.12
CLN6-204ENST00000564752 KBTBD13C9JR72 458 aa22.03■■□□□ 1.12
CLN6-204ENST00000564752 MDM2Q00987 491 aaPredicted RBP22.03■■□□□ 1.12
CLN6-204ENST00000564752 PRPF38AQ8NAV1 312 aaKnown RBP22.03■■□□□ 1.12
CLN6-204ENST00000564752 TINF2Q9BSI4 451 aa22.03■■□□□ 1.12
CLN6-204ENST00000564752 NACAP1Q9BZK3 213 aa22.03■■□□□ 1.12
CLN6-204ENST00000564752 RWDD1Q9H446 243 aaPredicted RBP22.03■■□□□ 1.12
CLN6-204ENST00000564752 MTMR4Q9NYA4 1195 aa22.03■■□□□ 1.12
CLN6-204ENST00000564752 DLL1O00548 723 aa22.02■■□□□ 1.12
CLN6-204ENST00000564752 RTP1P59025 263 aa22.02■■□□□ 1.12
CLN6-204ENST00000564752 LRRC41Q15345 812 aa22.02■■□□□ 1.12
CLN6-204ENST00000564752 ZMYM1Q5SVZ6 1142 aa22.02■■□□□ 1.12
CLN6-204ENST00000564752 SLC39A5Q6ZMH5 540 aa22.02■■□□□ 1.12
CLN6-204ENST00000564752 CEP95Q96GE4 821 aa22.02■■□□□ 1.12
CLN6-204ENST00000564752 TEX13BQ9BXU2 312 aa22.02■■□□□ 1.12
CLN6-204ENST00000564752 SYNPO2Q9UMS6 1093 aa22.02■■□□□ 1.12
CLN6-204ENST00000564752 SUPT16HQ9Y5B9 1047 aaKnown RBP22.02■■□□□ 1.12
CLN6-204ENST00000564752 FRMPD3Q5JV73 1810 aa22.01■■□□□ 1.11
CLN6-204ENST00000564752 FAM47AQ5JRC9 791 aa22.01■■□□□ 1.11
CLN6-204ENST00000564752 SNRNP48Q6IEG0 339 aaKnown RBP22.01■■□□□ 1.11
CLN6-204ENST00000564752 RIPK3Q9Y572 518 aa22.01■■□□□ 1.11
CLN6-204ENST00000564752 GREB1LQ9C091 1923 aaPredicted RBP22.01■■□□□ 1.11
CLN6-204ENST00000564752 PARP14Q460N5 1801 aa22.01■■□□□ 1.11
CLN6-204ENST00000564752 ATP2A1O14983 1001 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms