RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 IL17RBQ9NRM6 502 aa17.31■□□□□ 0.36
HERC2-207ENST00000564734 TADA3O75528 432 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 APBA3O96018 575 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 KLHL10Q6JEL2 608 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 IQUBQ8NA54 791 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 KIFC2Q96AC6 838 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 WDR24Q96S15 920 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 TSPY2A6NKD2 308 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 NPHP1O15259 732 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 USP17L8P0C7I0 530 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 C12orf60Q5U649 245 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 NBPF5PQ86XG9 351 aaPredicted RBP17.3■□□□□ 0.36
HERC2-207ENST00000564734 SH3GLB2Q9NR46 395 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 M0R2N6 131 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 URI1O94763 535 aaPredicted RBP17.3■□□□□ 0.36
HERC2-207ENST00000564734 NT5C2P49902 561 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 MAP3K9P80192 1104 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 RBL2Q08999 1139 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 ARL6IP4Q66PJ3 421 aaKnown RBP17.3■□□□□ 0.36
HERC2-207ENST00000564734 DGKHQ86XP1 1220 aa17.3■□□□□ 0.36
HERC2-207ENST00000564734 PYM1Q9BRP8 204 aaKnown RBP17.3■□□□□ 0.36
HERC2-207ENST00000564734 KIF5BP33176 963 aa17.29■□□□□ 0.36
HERC2-207ENST00000564734 STAMQ92783 540 aa17.29■□□□□ 0.36
HERC2-207ENST00000564734 CTAGE1Q96RT6 745 aa17.29■□□□□ 0.36
HERC2-207ENST00000564734 LRRC10BA6NIK2 292 aa17.29■□□□□ 0.36
HERC2-207ENST00000564734 GTPBP6O43824 516 aaPredicted RBP17.29■□□□□ 0.36
HERC2-207ENST00000564734 MCM7P33993 719 aa17.29■□□□□ 0.36
HERC2-207ENST00000564734 MTF1Q14872 753 aa17.29■□□□□ 0.36
HERC2-207ENST00000564734 MCM9Q9NXL9 1143 aa17.29■□□□□ 0.36
HERC2-207ENST00000564734 CCNL1Q9UK58 526 aaPredicted RBP17.29■□□□□ 0.36
HERC2-207ENST00000564734 FAM205AQ6ZU69 1335 aa17.29■□□□□ 0.36
HERC2-207ENST00000564734 FECHP22830 423 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 ARHGAP29Q52LW3 1261 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
HERC2-207ENST00000564734 BLIDQ8IZY5 108 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 IGSF22Q8N9C0 903 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 NAA15Q9BXJ9 866 aaKnown RBP17.28■□□□□ 0.36
HERC2-207ENST00000564734 BLZF1Q9H2G9 400 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
HERC2-207ENST00000564734 ROBO3Q96MS0 1386 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 IGSF3O75054 1194 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 CALML3P27482 149 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 CASQ1P31415 396 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 CLCN6P51797 869 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 TFAP4Q01664 338 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 SLC35G1Q2M3R5 365 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 KRT222Q8N1A0 295 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 CCDC24Q8N4L8 307 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 CARD6Q9BX69 1037 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 MRPL44Q9H9J2 332 aaKnown RBP17.28■□□□□ 0.36
HERC2-207ENST00000564734 CTNND2Q9UQB3 1225 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 ITIH6Q6UXX5 1313 aa17.28■□□□□ 0.36
HERC2-207ENST00000564734 SOWAHDA6NJG2 315 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 EFCAB8A8MWE9 144 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 LONP1P36776 959 aaKnown RBP17.27■□□□□ 0.36
HERC2-207ENST00000564734 GNG11P61952 73 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 GRM4Q14833 912 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 RAD9BQ6WBX8 426 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 DESI2Q9BSY9 194 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 RWDD2AQ9UIY3 292 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 PCDHA4Q9UN74 947 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 CCDC88AQ3V6T2 1871 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 STAG2Q8N3U4 1231 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 KAT14Q9H8E8 782 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 JAG2Q9Y219 1238 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 MRFAP1Q9Y605 127 aa17.27■□□□□ 0.36
HERC2-207ENST00000564734 GABPB1Q06547 395 aaPredicted RBP17.27■□□□□ 0.35
HERC2-207ENST00000564734 TYW1BQ6NUM6 668 aa17.27■□□□□ 0.35
HERC2-207ENST00000564734 AMIGO3Q86WK7 504 aa17.27■□□□□ 0.35
HERC2-207ENST00000564734 TCP11L1Q9NUJ3 509 aa17.27■□□□□ 0.35
HERC2-207ENST00000564734 MAD2L2Q9UI95 211 aa17.27■□□□□ 0.35
HERC2-207ENST00000564734 ADGRG1Q9Y653 693 aa17.27■□□□□ 0.35
HERC2-207ENST00000564734 MFAP3LO75121 409 aa17.26■□□□□ 0.35
HERC2-207ENST00000564734 DZIP1Q86YF9 867 aaKnown RBP17.26■□□□□ 0.35
HERC2-207ENST00000564734 FAM177A1Q8N128 213 aaPredicted RBP17.26■□□□□ 0.35
HERC2-207ENST00000564734 PNMA1Q8ND90 353 aa17.26■□□□□ 0.35
HERC2-207ENST00000564734 UBXN4Q92575 508 aa17.26■□□□□ 0.35
HERC2-207ENST00000564734 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
HERC2-207ENST00000564734 ZNF658Q5TYW1 1059 aaPredicted RBP17.26■□□□□ 0.35
HERC2-207ENST00000564734 PPFIBP1Q86W92 1011 aa17.26■□□□□ 0.35
HERC2-207ENST00000564734 SH3RF3Q8TEJ3 882 aaPredicted RBP17.26■□□□□ 0.35
HERC2-207ENST00000564734 DYNLL2Q96FJ2 89 aa17.26■□□□□ 0.35
HERC2-207ENST00000564734 FHOD1Q9Y613 1164 aa17.26■□□□□ 0.35
HERC2-207ENST00000564734 TNRC6CQ9HCJ0 1690 aaKnown RBP17.26■□□□□ 0.35
HERC2-207ENST00000564734 KRT31Q15323 416 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 RRAGBQ5VZM2 374 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 DAGLBQ8NCG7 672 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 MNS1Q8NEH6 495 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 GPKOWQ92917 476 aaPredicted RBP eCLIP17.25■□□□□ 0.35
HERC2-207ENST00000564734 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 ZPR1O75312 459 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 ZRANB2O95218 330 aaKnown RBP eCLIP17.25■□□□□ 0.354e-8■■■□□ 15.1
HERC2-207ENST00000564734 GYPCP04921 128 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 CCDC175P0C221 793 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 PPP4CP60510 307 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 SF3B2Q13435 895 aaKnown RBP17.25■□□□□ 0.35
HERC2-207ENST00000564734 FILIP1LQ4L180 1135 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 SLC51AQ86UW1 340 aa17.25■□□□□ 0.35
HERC2-207ENST00000564734 SBF2Q86WG5 1849 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms