RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 UBP1Q9NZI7 540 aa7.55□□□□□ -1.2
CHD9-212ENST00000564641 SSU72P8A0A1W2PR75 194 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 ZBTB7CA1YPR0 619 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 MEIS3P2A8K0S8 358 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 RBAK-RBAKDNI3L0D1 243 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 ENDOUP21128 410 aaKnown RBP7.54□□□□□ -1.2
CHD9-212ENST00000564641 FBLN7Q53RD9 439 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 GK5Q6ZS86 529 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 CILP2Q8IUL8 1156 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 SIAH1Q8IUQ4 282 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 KIAA0825Q8IV33 1275 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 TMEM87AQ8NBN3 555 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 LINC00116Q8NCU8 138 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 NKD1Q969G9 470 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 C19orf44Q9H6X5 657 aa7.54□□□□□ -1.2
CHD9-212ENST00000564641 YBX2Q9Y2T7 364 aaKnown RBP7.54□□□□□ -1.2
CHD9-212ENST00000564641 C1QTNF9P0C862 333 aa7.53□□□□□ -1.2
CHD9-212ENST00000564641 IMPDH2P12268 514 aa7.53□□□□□ -1.2
CHD9-212ENST00000564641 TRHRP34981 398 aaPredicted RBP7.53□□□□□ -1.2
CHD9-212ENST00000564641 KIR2DL1P43626 348 aaPredicted RBP7.53□□□□□ -1.2
CHD9-212ENST00000564641 KIR2DL2P43627 348 aaPredicted RBP7.53□□□□□ -1.2
CHD9-212ENST00000564641 TMCO4Q5TGY1 634 aa7.53□□□□□ -1.2
CHD9-212ENST00000564641 USHBP1Q8N6Y0 703 aa7.53□□□□□ -1.2
CHD9-212ENST00000564641 SPON2Q9BUD6 331 aa7.53□□□□□ -1.2
CHD9-212ENST00000564641 METTL5Q9NRN9 209 aaKnown RBP7.53□□□□□ -1.2
CHD9-212ENST00000564641 TCAF2A6NFQ2 919 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 TNFRSF10CO14798 259 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 PEX10O60683 326 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 KRT1P04264 644 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 NME1P15531 152 aaKnown RBP7.52□□□□□ -1.21
CHD9-212ENST00000564641 ZNF16P17020 682 aaPredicted RBP7.52□□□□□ -1.21
CHD9-212ENST00000564641 RPL10P27635 214 aaKnown RBP7.52□□□□□ -1.21
CHD9-212ENST00000564641 CFPP27918 469 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 ZNF76P36508 570 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 CLCQ05315 142 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 SPOCD1Q6ZMY3 1216 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 LRRC56Q8IYG6 542 aaPredicted RBP7.52□□□□□ -1.21
CHD9-212ENST00000564641 KCNN1Q92952 543 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 TCTN2Q96GX1 697 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 INTS4Q96HW7 963 aaKnown RBP7.52□□□□□ -1.21
CHD9-212ENST00000564641 DHRS1Q96LJ7 313 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 GPR160Q9UJ42 338 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 TCFL5Q9UL49 500 aa7.52□□□□□ -1.21
CHD9-212ENST00000564641 SIGLEC6O43699 453 aa7.51□□□□□ -1.21
CHD9-212ENST00000564641 TIGD5Q53EQ6 642 aa7.51□□□□□ -1.21
CHD9-212ENST00000564641 INTS3Q68E01 1043 aaKnown RBP7.51□□□□□ -1.21
CHD9-212ENST00000564641 G6PC3Q9BUM1 346 aa7.51□□□□□ -1.21
CHD9-212ENST00000564641 CD320Q9NPF0 282 aa7.51□□□□□ -1.21
CHD9-212ENST00000564641 PRR13Q9NZ81 148 aa7.51□□□□□ -1.21
CHD9-212ENST00000564641 ZMYM5Q9UJ78 669 aa7.51□□□□□ -1.21
CHD9-212ENST00000564641 SEMA7AO75326 666 aa7.5□□□□□ -1.21
CHD9-212ENST00000564641 POLR2BP30876 1174 aaKnown RBP7.5□□□□□ -1.21
CHD9-212ENST00000564641 KCNA10Q16322 511 aa7.5□□□□□ -1.21
CHD9-212ENST00000564641 ATG14Q6ZNE5 492 aa7.5□□□□□ -1.21
CHD9-212ENST00000564641 WAPLQ7Z5K2 1190 aa7.5□□□□□ -1.21
CHD9-212ENST00000564641 ETV2O00321 342 aaPredicted RBP7.49□□□□□ -1.21
CHD9-212ENST00000564641 SLC14A2Q15849 920 aa7.49□□□□□ -1.21
CHD9-212ENST00000564641 CIAPIN1Q6FI81 312 aa7.49□□□□□ -1.21
CHD9-212ENST00000564641 TMC3Q7Z5M5 1100 aa7.49□□□□□ -1.21
CHD9-212ENST00000564641 MAP6Q96JE9 813 aa7.49□□□□□ -1.21
CHD9-212ENST00000564641 FOXP3Q9BZS1 431 aa7.49□□□□□ -1.21
CHD9-212ENST00000564641 MKRN2Q9H000 416 aaKnown RBP7.49□□□□□ -1.21
CHD9-212ENST00000564641 ZNF552Q9H707 407 aaPredicted RBP7.49□□□□□ -1.21
CHD9-212ENST00000564641 CRTAC1Q9NQ79 661 aa7.49□□□□□ -1.21
CHD9-212ENST00000564641 PCDHB12Q9Y5F1 795 aa7.49□□□□□ -1.21
CHD9-212ENST00000564641 HRKO00198 91 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 NRDCO43847 1150 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 PRAMEF1O95521 474 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 PDE6BP35913 854 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 USP48Q86UV5 1035 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 AMIGO3Q86WK7 504 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 C1QL4Q86Z23 238 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 EAF1Q96JC9 268 aaPredicted RBP7.48□□□□□ -1.21
CHD9-212ENST00000564641 SLC6A18Q96N87 628 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 PRDM14Q9GZV8 571 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 CHST7Q9NS84 486 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 TNFRSF10DQ9UBN6 386 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 EBF1Q9UH73 591 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 ZNRF3Q9ULT6 936 aa7.48□□□□□ -1.21
CHD9-212ENST00000564641 NPIPB6E9PJ23 425 aa7.47□□□□□ -1.21
CHD9-212ENST00000564641 PSPNO60542 156 aa7.47□□□□□ -1.21
CHD9-212ENST00000564641 SYPP08247 313 aa7.47□□□□□ -1.21
CHD9-212ENST00000564641 LDLRAD1Q5T700 205 aa7.47□□□□□ -1.21
CHD9-212ENST00000564641 LCE1DQ5T752 114 aa7.47□□□□□ -1.21
CHD9-212ENST00000564641 NLRX1Q86UT6 975 aa7.47□□□□□ -1.21
CHD9-212ENST00000564641 TMEM192Q8IY95 271 aa7.47□□□□□ -1.21
CHD9-212ENST00000564641 TAB3Q8N5C8 712 aaPredicted RBP7.47□□□□□ -1.21
CHD9-212ENST00000564641 SHISA4Q96DD7 197 aa7.47□□□□□ -1.21
CHD9-212ENST00000564641 FCRL2Q96LA5 508 aaPredicted RBP7.47□□□□□ -1.21
CHD9-212ENST00000564641 BACH2Q9BYV9 841 aa7.47□□□□□ -1.21
CHD9-212ENST00000564641 SMG5Q9UPR3 1016 aaKnown RBP7.47□□□□□ -1.21
CHD9-212ENST00000564641 TEX51A0A1B0GUA7 166 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 TMEM82A0PJX8 343 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 OR14I1A6ND48 311 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 ZSCAN22P10073 491 aaPredicted RBP7.46□□□□□ -1.22
CHD9-212ENST00000564641 BMP8BP34820 402 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 FANCCQ00597 558 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 SNW1Q13573 536 aaKnown RBP7.46□□□□□ -1.22
CHD9-212ENST00000564641 AUHQ13825 339 aaKnown RBP7.46□□□□□ -1.22
CHD9-212ENST00000564641 BBS9Q3SYG4 887 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms