RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 PDE4BQ07343 736 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 CLEC17AQ6ZS10 378 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 CLEC10AQ8IUN9 316 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
UBFD1-203ENST00000564106 SLC44A5Q8NCS7 719 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 ACER1Q8TDN7 264 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 TCEANC2Q96MN5 208 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 P2RX7Q99572 595 aaKnown RBP11.38□□□□□ -0.59
UBFD1-203ENST00000564106 WDR18Q9BV38 432 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 DCP1AQ9NPI6 582 aaPredicted RBP11.38□□□□□ -0.59
UBFD1-203ENST00000564106 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 ATP6V1DQ9Y5K8 247 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 ROBO3Q96MS0 1386 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 TRIOBPQ9H2D6 2365 aa11.38□□□□□ -0.59
UBFD1-203ENST00000564106 NEDD4P46934 1319 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 CYP2D7A0A087X1C5 515 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 MINDY4BA8MYZ0 360 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 CNMDO75829 334 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 LARGE1O95461 756 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 RCAN1P53805 252 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 FCGRTP55899 365 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 ZYXQ15942 572 aaKnown RBP11.37□□□□□ -0.59
UBFD1-203ENST00000564106 Q3C1V9 767 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 KIAA1755Q5JYT7 1200 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 TATDN1Q6P1N9 297 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 CPLX2Q6PUV4 134 aaKnown RBP11.37□□□□□ -0.59
UBFD1-203ENST00000564106 IQCA1Q86XH1 822 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 RAET1EQ8TD07 263 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 SMCR8Q8TEV9 937 aaPredicted RBP11.37□□□□□ -0.59
UBFD1-203ENST00000564106 TNPO1Q92973 898 aaKnown RBP11.37□□□□□ -0.59
UBFD1-203ENST00000564106 UBAC1Q9BSL1 405 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 DHX36Q9H2U1 1008 aaKnown RBP11.37□□□□□ -0.59
UBFD1-203ENST00000564106 TOMM22Q9NS69 142 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 GJD2Q9UKL4 321 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 TAOK2Q9UL54 1235 aa11.37□□□□□ -0.59
UBFD1-203ENST00000564106 SZT2Q5T011 3432 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 B4E1Z4 1266 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 USP17L21D6R901 530 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 SH2B2O14492 632 aaPredicted RBP11.36□□□□□ -0.59
UBFD1-203ENST00000564106 TNPO2O14787 897 aaKnown RBP11.36□□□□□ -0.59
UBFD1-203ENST00000564106 ORC4O43929 436 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 ADCY3O60266 1144 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 KDM4AO75164 1064 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 CDKL5O76039 1030 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 GNRH1P01148 92 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 INHAP05111 366 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 FGRP09769 529 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 GJB2P29033 226 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 BACE1P56817 501 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 CTDSPL2Q05D32 466 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 GABPAQ06546 454 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 APOBRQ0VD83 1088 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 NBR1Q14596 966 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 PPP2R5BQ15173 497 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 FAM110CQ1W6H9 321 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 CCDC178Q5BJE1 867 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 CTR9Q6PD62 1173 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 SYNE3Q6ZMZ3 975 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 SGMS1Q86VZ5 419 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 TMEM106CQ9BVX2 250 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 MCM9Q9NXL9 1143 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 PARP14Q460N5 1801 aa11.36□□□□□ -0.59
UBFD1-203ENST00000564106 A0A0G2JMZ2 1700 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 KLF18A0A0U1RQI7 1052 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 A0A1W2PRG0 241 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 GOLGA8BA8MQT2 603 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 IFIT3O14879 490 aaKnown RBP11.35□□□□□ -0.59
UBFD1-203ENST00000564106 STX6O43752 255 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 BRD1O95696 1058 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 PDIA3P30101 505 aaKnown RBP11.35□□□□□ -0.59
UBFD1-203ENST00000564106 MCM4P33991 863 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 PRMT2P55345 433 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 ANTXR2P58335 489 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 STK3Q13188 491 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 TMEM67Q5HYA8 995 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 FOXP4Q8IVH2 680 aaPredicted RBP11.35□□□□□ -0.59
UBFD1-203ENST00000564106 CRACR2BQ8N4Y2 399 aaPredicted RBP11.35□□□□□ -0.59
UBFD1-203ENST00000564106 RGS22Q8NE09 1264 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 DIS3LQ8TF46 1054 aaKnown RBP11.35□□□□□ -0.59
UBFD1-203ENST00000564106 DYNLL2Q96FJ2 89 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 LRRC2Q9BYS8 371 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 PORCNQ9H237 461 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 RBPJLQ9UBG7 517 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 NAP1L2Q9ULW6 460 aaPredicted RBP11.35□□□□□ -0.59
UBFD1-203ENST00000564106 NID2Q14112 1375 aa11.35□□□□□ -0.59
UBFD1-203ENST00000564106 CCDC196A0A1B0GTZ2 297 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 CPLX1O14810 134 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 ASNSP08243 561 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 GJA8P48165 433 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 MNX1P50219 401 aaPredicted RBP11.34□□□□□ -0.59
UBFD1-203ENST00000564106 HERVK_113P62684 666 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 SCRN1Q12765 414 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 WTAPQ15007 396 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 ARHGEF6Q15052 776 aa11.34□□□□□ -0.59
UBFD1-203ENST00000564106 RRP12Q5JTH9 1297 aaKnown RBP11.34□□□□□ -0.59
UBFD1-203ENST00000564106 C12orf60Q5U649 245 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms