RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 ZNF512BQ96KM6 892 aaPredicted RBP6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 SPATA32Q96LK8 384 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 DBNDD1Q9H9R9 158 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 CD209Q9NNX6 404 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 ZDHHC3Q9NYG2 299 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 STAP2Q9UGK3 403 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 ZNF232Q9UNY5 417 aa6.34□□□□□ -1.39
HERPUD1-207ENST00000563781 H3BM21 787 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 IFIT2P09913 472 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 ATP5JP18859 108 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 MX1P20591 662 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 MCAMP43121 646 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 VEGFBP49765 207 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 PDE1AP54750 535 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 RASGRF1Q13972 1273 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 CAVIN4Q5BKX8 364 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 C9orf131Q5VYM1 1079 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 PI16Q6UXB8 463 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 PI4K2BQ8TCG2 481 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 UBXN4Q92575 508 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 ZNF775Q96BV0 537 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 GAS2L1Q99501 681 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 COA1Q9GZY4 146 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 BCL11AQ9H165 835 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 KCNQ5Q9NR82 932 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 ECHDC1Q9NTX5 307 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 CUEDC1Q9NWM3 386 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 RNF181Q9P0P0 153 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 CXXC1Q9P0U4 656 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 HMG20BQ9P0W2 317 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 HCN4Q9Y3Q4 1203 aa6.33□□□□□ -1.4
HERPUD1-207ENST00000563781 AOX1Q06278 1338 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 PDS5AQ29RF7 1337 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 TTC41PQ6P2S7 1318 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 FAM205AQ6ZU69 1335 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 ZNF541Q9H0D2 1346 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 ANKRD33BA6NCL7 494 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 FZD9O00144 591 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 UQCRFS1P1P0C7P4 283 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 ATP4AP20648 1035 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 ZAP70P43403 619 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 COL19A1Q14993 1142 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 DBN1Q16643 649 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 TTC39AQ5SRH9 613 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 DACT2Q5SW24 774 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 GORABQ5T7V8 394 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 C1orf53Q5VUE5 145 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 PODNQ7Z5L7 613 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 NIM1KQ8IY84 436 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 NANOS1Q8WY41 292 aaKnown RBP6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 EGFL7Q9UHF1 273 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 ZNRF3Q9ULT6 936 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 JAG2Q9Y219 1238 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 CEP350Q5VT06 3117 aa6.32□□□□□ -1.4
HERPUD1-207ENST00000563781 PSMD14O00487 310 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 RAD17O75943 681 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 GLRX3O76003 335 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 CYP2E1P05181 493 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 THBS1P07996 1170 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 GSPT1P15170 499 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 CXCL9Q07325 125 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 NFX1Q12986 1120 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 CHAF1AQ13111 956 aaPredicted RBP6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 SF3A1Q15459 793 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 GRIK5Q16478 980 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 CCDC158Q5M9N0 1113 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 RIPOR1Q6ZS17 1223 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 VPS37DQ86XT2 251 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 TRIM22Q8IYM9 498 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 CERS5Q8N5B7 392 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 SPATA5Q8NB90 893 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 EDC3Q96F86 508 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 GPATCH3Q96I76 525 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 GMLQ99445 158 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 HAUS7Q99871 368 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 MXD3Q9BW11 206 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 PHACTR1Q9C0D0 580 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 CRISPLD1Q9H336 500 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 BOLA2Q9H3K6 86 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 GPAMQ9HCL2 828 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 PIH1D3Q9NQM4 214 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 GNL3LQ9NVN8 582 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 DENND2AQ9ULE3 1009 aa6.31□□□□□ -1.4
HERPUD1-207ENST00000563781 SALL1Q9NSC2 1324 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 ERC2O15083 957 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 VIL1P09327 827 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 C1QTNF8P60827 252 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 FKBP1AP62942 108 aaKnown RBP6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 TTC22Q5TAA0 569 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 STRIP1Q5VSL9 837 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 TTLL5Q6EMB2 1281 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 CIAPIN1Q6FI81 312 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 ALDH16A1Q8IZ83 802 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 VWA5B2Q8N398 1253 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 ZNF384Q8TF68 577 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 JDP2Q8WYK2 163 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 GMCL1Q96IK5 515 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 ZIC5Q96T25 663 aa6.3□□□□□ -1.4
HERPUD1-207ENST00000563781 DNAJC2Q99543 621 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms