RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 ZSCAN10Q96SZ4 725 aaPredicted RBP13.3□□□□□ -0.28
ABCA3-203ENST00000563623 PSMB7Q99436 277 aa13.3□□□□□ -0.28
ABCA3-203ENST00000563623 ABCC12Q96J65 1359 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 BMP15O95972 392 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 FOXR1Q6PIV2 292 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 ENAHQ8N8S7 591 aaPredicted RBP13.29□□□□□ -0.28
ABCA3-203ENST00000563623 CCDC51Q96ER9 411 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 PLA2G12BQ9BX93 195 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 MROH5Q6ZUA9 1318 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 NMT2O60551 498 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 IVLP07476 585 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 UBA7P41226 1012 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 MTIF2P46199 727 aaKnown RBP13.29□□□□□ -0.28
ABCA3-203ENST00000563623 DNAJC21Q5F1R6 531 aaKnown RBP13.29□□□□□ -0.28
ABCA3-203ENST00000563623 CCDC70Q6NSX1 233 aa13.29□□□□□ -0.28
ABCA3-203ENST00000563623 RPN1P04843 607 aaKnown RBP13.28□□□□□ -0.28
ABCA3-203ENST00000563623 OR8K1Q8NGG5 319 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 RIN2Q8WYP3 895 aaPredicted RBP13.28□□□□□ -0.28
ABCA3-203ENST00000563623 BCCIPQ9P287 314 aaKnown RBP eCLIP13.28□□□□□ -0.28
ABCA3-203ENST00000563623 L1RE1Q9UN81 338 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 USP17L12C9JPN9 530 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 USP17L21D6R901 530 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 NDUFA10O95299 355 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 TCP11X2Q5H9J9 407 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 GPKOWQ92917 476 aaPredicted RBP eCLIP13.28□□□□□ -0.28
ABCA3-203ENST00000563623 KIF13AQ9H1H9 1805 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 TSPY2A6NKD2 308 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 PARP1P09874 1014 aaKnown RBP13.28□□□□□ -0.28
ABCA3-203ENST00000563623 CYP27A1Q02318 531 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 CCDC178Q5BJE1 867 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 VGLL2Q8N8G2 317 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 SAR1BQ9Y6B6 198 aa13.28□□□□□ -0.28
ABCA3-203ENST00000563623 CCDC194A0A1B0GVG4 234 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 RNF40O75150 1001 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 PRCPP42785 496 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 TUBB2AQ13885 445 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 CDKAL1Q5VV42 579 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 BICDL1Q6ZP65 573 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 JAKMIP2Q96AA8 810 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 TUBB2BQ9BVA1 445 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 DEF6Q9H4E7 631 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 RMND1Q9NWS8 449 aa13.27□□□□□ -0.28
ABCA3-203ENST00000563623 XDHP47989 1333 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 PP2D1A8MPX8 630 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 MAP2K7O14733 419 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 GTPBP6O43824 516 aaPredicted RBP13.27□□□□□ -0.29
ABCA3-203ENST00000563623 AFAP1L1Q8TED9 768 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 SPATA31A3Q5VYP0 1347 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 LRRIQ3A6PVS8 624 aaPredicted RBP13.27□□□□□ -0.29
ABCA3-203ENST00000563623 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.29
ABCA3-203ENST00000563623 IDEP14735 1019 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 TBC1D8BQ0IIM8 1120 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 CCDC96Q2M329 555 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 MUM1L1Q5H9M0 696 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 APTXQ7Z2E3 356 aaKnown RBP13.27□□□□□ -0.29
ABCA3-203ENST00000563623 NWD2Q9ULI1 1742 aa13.27□□□□□ -0.29
ABCA3-203ENST00000563623 KRT86O43790 486 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 CHRM1P11229 460 aaPredicted RBP13.26□□□□□ -0.29
ABCA3-203ENST00000563623 ELOA2Q8IYF1 753 aaPredicted RBP13.26□□□□□ -0.29
ABCA3-203ENST00000563623 FAM71BQ8TC56 605 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 MMS19Q96T76 1030 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 CDHR2Q9BYE9 1310 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 B4DLN1 442 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 TULP2O00295 520 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 CCDC47Q96A33 483 aaKnown RBP13.26□□□□□ -0.29
ABCA3-203ENST00000563623 PHF20Q9BVI0 1012 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 SIPA1L3O60292 1781 aaPredicted RBP13.26□□□□□ -0.29
ABCA3-203ENST00000563623 PSMA7O14818 248 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 CYLC1P35663 651 aaPredicted RBP13.26□□□□□ -0.29
ABCA3-203ENST00000563623 SPA17Q15506 151 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 PKN1Q16512 942 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 CCDC152Q4G0S7 254 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 SUSD4Q5VX71 490 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 MSANTD4Q8NCY6 345 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 ZNF512BQ96KM6 892 aaPredicted RBP13.26□□□□□ -0.29
ABCA3-203ENST00000563623 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 UBXN6Q9BZV1 441 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 RWDD2AQ9UIY3 292 aa13.26□□□□□ -0.29
ABCA3-203ENST00000563623 NIP7Q9Y221 180 aaKnown RBP eCLIP13.26□□□□□ -0.29
ABCA3-203ENST00000563623 PRPF3O43395 683 aaKnown RBP13.25□□□□□ -0.29
ABCA3-203ENST00000563623 PPARDQ03181 441 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 TRIM14Q14142 442 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 ADGRA1Q86SQ6 560 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 SRLQ86TD4 932 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 CSGALNACT2Q8N6G5 542 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 ZNF185O15231 689 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 VEGFAP15692 232 aaPredicted RBP13.25□□□□□ -0.29
ABCA3-203ENST00000563623 CHRNDQ07001 517 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 CCDC181Q5TID7 509 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 DTHD1Q6ZMT9 781 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 RBM28Q9NW13 759 aaKnown RBP13.25□□□□□ -0.29
ABCA3-203ENST00000563623 USP54Q70EL1 1684 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 WTIPA6NIX2 430 aaPredicted RBP13.25□□□□□ -0.29
ABCA3-203ENST00000563623 ARHGAP25P42331 645 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 KRT83P78385 493 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 C2orf54Q08AI8 447 aa13.25□□□□□ -0.29
ABCA3-203ENST00000563623 ENOX2Q16206 610 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms