RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 FBXO28Q9NVF7 368 aa25.15■■□□□ 1.62
CHD9-208ENST00000563410 SAMD1Q6SPF0 538 aaPredicted RBP25.14■■□□□ 1.62
CHD9-208ENST00000563410 ABRAQ8N0Z2 381 aa25.14■■□□□ 1.62
CHD9-208ENST00000563410 SENP6Q9GZR1 1112 aaPredicted RBP25.14■■□□□ 1.62
CHD9-208ENST00000563410 RASA1P20936 1047 aa25.13■■□□□ 1.61
CHD9-208ENST00000563410 GIMAP6Q6P9H5 292 aa25.13■■□□□ 1.61
CHD9-208ENST00000563410 APPBP2Q92624 585 aa25.13■■□□□ 1.61
CHD9-208ENST00000563410 ROBO3Q96MS0 1386 aa25.13■■□□□ 1.61
CHD9-208ENST00000563410 EPB41L4AQ9HCS5 686 aaPredicted RBP25.12■■□□□ 1.61
CHD9-208ENST00000563410 GOPCQ9HD26 462 aa25.12■■□□□ 1.61
CHD9-208ENST00000563410 DNM1LO00429 736 aa25.11■■□□□ 1.61
CHD9-208ENST00000563410 RNF113AO15541 343 aaKnown RBP25.11■■□□□ 1.61
CHD9-208ENST00000563410 SLC25A27O95847 323 aa25.11■■□□□ 1.61
CHD9-208ENST00000563410 FAM83BQ5T0W9 1011 aa25.11■■□□□ 1.61
CHD9-208ENST00000563410 GPATCH3Q96I76 525 aa25.11■■□□□ 1.61
CHD9-208ENST00000563410 MAML3Q96JK9 1138 aa25.11■■□□□ 1.61
CHD9-208ENST00000563410 SLC5A4Q9NY91 659 aa25.11■■□□□ 1.61
CHD9-208ENST00000563410 PPP1R9AQ9ULJ8 1098 aa25.11■■□□□ 1.61
CHD9-208ENST00000563410 COL6A3P12111 3177 aa25.11■■□□□ 1.61
CHD9-208ENST00000563410 VWA5AO00534 786 aa25.1■■□□□ 1.61
CHD9-208ENST00000563410 GPAA1O43292 621 aa25.1■■□□□ 1.61
CHD9-208ENST00000563410 FCER1AP12319 257 aa25.1■■□□□ 1.61
CHD9-208ENST00000563410 PRAMEF19Q5SWL8 479 aa25.1■■□□□ 1.61
CHD9-208ENST00000563410 RIOX2Q8IUF8 465 aa25.1■■□□□ 1.61
CHD9-208ENST00000563410 TDHQ8IZJ6 230 aa25.1■■□□□ 1.61
CHD9-208ENST00000563410 STK11IPQ8N1F8 1099 aa25.1■■□□□ 1.61
CHD9-208ENST00000563410 REPS2Q8NFH8 660 aa25.1■■□□□ 1.61
CHD9-208ENST00000563410 MINDY4BA8MYZ0 360 aa25.09■■□□□ 1.61
CHD9-208ENST00000563410 M0R2C6 588 aa25.09■■□□□ 1.61
CHD9-208ENST00000563410 SEPT4O43236 478 aa25.09■■□□□ 1.61
CHD9-208ENST00000563410 LRIT3Q3SXY7 679 aa25.09■■□□□ 1.61
CHD9-208ENST00000563410 GJC2Q5T442 439 aaPredicted RBP25.09■■□□□ 1.61
CHD9-208ENST00000563410 ANO1Q5XXA6 986 aa25.09■■□□□ 1.61
CHD9-208ENST00000563410 UBE2OQ9C0C9 1292 aaKnown RBP25.09■■□□□ 1.61
CHD9-208ENST00000563410 ZNF214Q9UL59 606 aaPredicted RBP25.09■■□□□ 1.61
CHD9-208ENST00000563410 PCDHB15Q9Y5E8 787 aa25.09■■□□□ 1.61
CHD9-208ENST00000563410 LTBP2Q14767 1821 aa25.09■■□□□ 1.61
CHD9-208ENST00000563410 RAD21O60216 631 aa25.08■■□□□ 1.61
CHD9-208ENST00000563410 ZFYP08048 801 aaPredicted RBP25.08■■□□□ 1.61
CHD9-208ENST00000563410 ATN1P54259 1190 aaPredicted RBP25.08■■□□□ 1.61
CHD9-208ENST00000563410 MKNK2Q9HBH9 465 aa25.08■■□□□ 1.61
CHD9-208ENST00000563410 NYAP2Q9P242 653 aa25.08■■□□□ 1.61
CHD9-208ENST00000563410 IGKV6D-41A0A0C4DH26 115 aa25.07■■□□□ 1.6
CHD9-208ENST00000563410 STAT3P40763 770 aa25.07■■□□□ 1.6
CHD9-208ENST00000563410 ARRDC4Q8NCT1 418 aa25.07■■□□□ 1.6
CHD9-208ENST00000563410 MMP19Q99542 508 aa25.07■■□□□ 1.6
CHD9-208ENST00000563410 NUP88Q99567 741 aaPredicted RBP25.07■■□□□ 1.6
CHD9-208ENST00000563410 PGK2P07205 417 aa25.06■■□□□ 1.6
CHD9-208ENST00000563410 GNAT2P19087 354 aa25.06■■□□□ 1.6
CHD9-208ENST00000563410 MDM2Q00987 491 aaPredicted RBP25.06■■□□□ 1.6
CHD9-208ENST00000563410 GPR153Q6NV75 609 aa25.06■■□□□ 1.6
CHD9-208ENST00000563410 PI4K2BQ8TCG2 481 aa25.06■■□□□ 1.6
CHD9-208ENST00000563410 TTC41PQ6P2S7 1318 aa25.06■■□□□ 1.6
CHD9-208ENST00000563410 F5H6K3 240 aa25.05■■□□□ 1.6
CHD9-208ENST00000563410 KLRC3Q07444 240 aa25.05■■□□□ 1.6
CHD9-208ENST00000563410 ZNF792Q3KQV3 632 aa25.05■■□□□ 1.6
CHD9-208ENST00000563410 OTUD7AQ8TE49 926 aaPredicted RBP25.05■■□□□ 1.6
CHD9-208ENST00000563410 PATL2C9JE40 543 aaKnown RBP25.04■■□□□ 1.6
CHD9-208ENST00000563410 NDUFB10O96000 172 aa25.04■■□□□ 1.6
CHD9-208ENST00000563410 TDO2P48775 406 aa25.04■■□□□ 1.6
CHD9-208ENST00000563410 RTP1P59025 263 aa25.04■■□□□ 1.6
CHD9-208ENST00000563410 IFNL3Q8IZI9 196 aa25.04■■□□□ 1.6
CHD9-208ENST00000563410 SEC62Q99442 399 aaKnown RBP25.04■■□□□ 1.6
CHD9-208ENST00000563410 SLF1Q9BQI6 1058 aa25.04■■□□□ 1.6
CHD9-208ENST00000563410 KBTBD13C9JR72 458 aa25.03■■□□□ 1.6
CHD9-208ENST00000563410 PRDM1O75626 825 aa25.03■■□□□ 1.6
CHD9-208ENST00000563410 KCTD2Q14681 263 aa25.03■■□□□ 1.6
CHD9-208ENST00000563410 LRRC41Q15345 812 aa25.03■■□□□ 1.6
CHD9-208ENST00000563410 FAM47AQ5JRC9 791 aa25.03■■□□□ 1.6
CHD9-208ENST00000563410 SLC39A5Q6ZMH5 540 aa25.03■■□□□ 1.6
CHD9-208ENST00000563410 TINF2Q9BSI4 451 aa25.03■■□□□ 1.6
CHD9-208ENST00000563410 CLIP2Q9UDT6 1046 aa25.03■■□□□ 1.6
CHD9-208ENST00000563410 DIS3Q9Y2L1 958 aaKnown RBP25.03■■□□□ 1.6
CHD9-208ENST00000563410 MCM3APO60318 1980 aa25.03■■□□□ 1.6
CHD9-208ENST00000563410 LAMA2P24043 3122 aaKnown RBP25.03■■□□□ 1.6
CHD9-208ENST00000563410 APPP05067 770 aa25.02■■□□□ 1.6
CHD9-208ENST00000563410 COPB2P35606 906 aa25.02■■□□□ 1.6
CHD9-208ENST00000563410 MKL1Q969V6 931 aa25.02■■□□□ 1.6
CHD9-208ENST00000563410 NRBP1Q9UHY1 535 aa25.02■■□□□ 1.6
CHD9-208ENST00000563410 ERC2O15083 957 aa25.01■■□□□ 1.59
CHD9-208ENST00000563410 TAL1P17542 331 aaPredicted RBP25.01■■□□□ 1.59
CHD9-208ENST00000563410 SNX17Q15036 470 aa25.01■■□□□ 1.59
CHD9-208ENST00000563410 LRRFIP1Q32MZ4 808 aaKnown RBP25.01■■□□□ 1.59
CHD9-208ENST00000563410 ZNF444Q8N0Y2 327 aaPredicted RBP25.01■■□□□ 1.59
CHD9-208ENST00000563410 CEP95Q96GE4 821 aa25.01■■□□□ 1.59
CHD9-208ENST00000563410 TEX13BQ9BXU2 312 aa25.01■■□□□ 1.59
CHD9-208ENST00000563410 MTMR4Q9NYA4 1195 aa25.01■■□□□ 1.59
CHD9-208ENST00000563410 ATP11BQ9Y2G3 1177 aa25.01■■□□□ 1.59
CHD9-208ENST00000563410 RIPK3Q9Y572 518 aa25.01■■□□□ 1.59
CHD9-208ENST00000563410 MYCNP04198 464 aaPredicted RBP25■■□□□ 1.59
CHD9-208ENST00000563410 SNRNP48Q6IEG0 339 aaKnown RBP25■■□□□ 1.59
CHD9-208ENST00000563410 Q7L0L9 218 aa25■■□□□ 1.59
CHD9-208ENST00000563410 PRPF38AQ8NAV1 312 aaKnown RBP25■■□□□ 1.59
CHD9-208ENST00000563410 ZNF287Q9HBT7 754 aa25■■□□□ 1.59
CHD9-208ENST00000563410 ZNF865P0CJ78 1059 aaPredicted RBP24.99■■□□□ 1.59
CHD9-208ENST00000563410 ADCYAP1R1P41586 468 aa24.99■■□□□ 1.59
CHD9-208ENST00000563410 ZMYM1Q5SVZ6 1142 aa24.99■■□□□ 1.59
CHD9-208ENST00000563410 DEFB123Q8N688 67 aa24.99■■□□□ 1.59
CHD9-208ENST00000563410 PLIN4Q96Q06 1357 aa24.99■■□□□ 1.59
CHD9-208ENST00000563410 SALL3Q9BXA9 1300 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms