RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PDCL3Q9H2J4 239 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 FBRSQ9HAH7 460 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 PRDM11Q9NQV5 511 aa5.48□□□□□ -1.53
SMG1-207ENST00000563235 NFKBIL1Q9UBC1 381 aaPredicted RBP5.48□□□□□ -1.53
SMG1-207ENST00000563235 EIF2B4Q9UI10 523 aaKnown RBP5.48□□□□□ -1.53
SMG1-207ENST00000563235 V9GYY5 206 aaPredicted RBP5.48□□□□□ -1.53
SMG1-207ENST00000563235 GARTP22102 1010 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 HOXA10P31260 410 aaPredicted RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 CHKAP35790 457 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 ITGAEP38570 1179 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 PDE6CP51160 858 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 RASGRF1Q13972 1273 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 TTLL5Q6EMB2 1281 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 PI16Q6UXB8 463 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 NRSN1Q8IZ57 195 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 TRIM11Q96F44 468 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 HINFPQ9BQA5 517 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 TARS2Q9BW92 718 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 ELAC1Q9H777 363 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 TBC1D22BQ9NU19 505 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 ADAMTS12P58397 1594 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 A0A1B0GVC2 190 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 C2orf81A6NN90 581 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 OPLAHO14841 1288 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 B3GALNT1O75752 331 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 GZMAP12544 262 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 WEE1P30291 646 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 SOX5P35711 763 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 ATP6V1E1P36543 226 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 NSUN2Q08J23 767 aaKnown RBP eCLIP5.47□□□□□ -1.53
SMG1-207ENST00000563235 STRN3Q13033 797 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 ALG1LQ6GMV1 187 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 ENOSF1Q7L5Y1 443 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 EPM2AIP1Q7L775 607 aaPredicted RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 FASTKD5Q7L8L6 764 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 GALNT13Q8IUC8 556 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 FAM43AQ8N2R8 423 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 C17orf50Q8WW18 174 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 EAF1Q96JC9 268 aaPredicted RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 TBATAQ96M53 351 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 NUDT16L1Q9BRJ7 211 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 SLC5A4Q9NY91 659 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 R3HCC1Q9Y3T6 440 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 PHLDB1Q86UU1 1377 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 CCDC196A0A1B0GTZ2 297 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 DDX11L8A8MPP1 907 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 KIAA0754O94854 1291 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 CNOT4O95628 575 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 DNTTP04053 509 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 CAPN2P17655 700 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 HSPA4P34932 840 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 KRT72Q14CN4 511 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 MUM1Q2TAK8 710 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 RRP12Q5JTH9 1297 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 FKBP15Q5T1M5 1219 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 NLRP14Q86W24 1093 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 SLC44A2Q8IWA5 706 aaPredicted RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 TSEN2Q8NCE0 465 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 ALKBH8Q96BT7 664 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 RSRC1Q96IZ7 334 aaKnown RBP5.47□□□□□ -1.53
SMG1-207ENST00000563235 LRGUKQ96M69 825 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 PCDHB9Q9Y5E1 797 aa5.47□□□□□ -1.53
SMG1-207ENST00000563235 TDRD9Q8NDG6 1382 aaKnown RBP5.46□□□□□ -1.53
SMG1-207ENST00000563235 KLHL41O60662 606 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 CPP00450 1065 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 NRLP54845 237 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 PDE4BQ07343 736 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 ORC1Q13415 861 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 WTAPQ15007 396 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 KCNV1Q6PIU1 500 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 BNC2Q6ZN30 1099 aaPredicted RBP5.46□□□□□ -1.54
SMG1-207ENST00000563235 ATCAYQ86WG3 371 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 ANKRD18AQ8IVF6 992 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 FAM186BQ8IYM0 893 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 RTKN2Q8IZC4 609 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 DCLK2Q8N568 766 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 BICD2Q8TD16 824 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 CCT6BQ92526 530 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 ERCC4Q92889 916 aaPredicted RBP5.46□□□□□ -1.54
SMG1-207ENST00000563235 RSAD1Q9HA92 442 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 ATP6V0A4Q9HBG4 840 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 PCSK1NQ9UHG2 260 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 LUC7L2Q9Y383 392 aaKnown RBP5.46□□□□□ -1.54
SMG1-207ENST00000563235 LRRFIP2Q9Y608 721 aaKnown RBP5.46□□□□□ -1.54
SMG1-207ENST00000563235 SOX9P48436 509 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 ALDH5A1P51649 535 aaPredicted RBP5.46□□□□□ -1.54
SMG1-207ENST00000563235 EMP3P54852 163 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 PPP2R5EQ16537 467 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 C8orf34Q49A92 452 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 SPATA1Q5VX52 437 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 HEATR6Q6AI08 1181 aaKnown RBP5.46□□□□□ -1.54
SMG1-207ENST00000563235 TRIM68Q6AZZ1 485 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 TRAF7Q6Q0C0 670 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 TMCO3Q6UWJ1 677 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 MFSD6Q6ZSS7 791 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 SAPCD2Q86UD0 394 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 CEP57L1Q8IYX8 460 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 PHTF2Q8N3S3 785 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 GMCL1Q96IK5 515 aa5.46□□□□□ -1.54
SMG1-207ENST00000563235 SLC39A3Q9BRY0 314 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms