RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PSEN2P49810 448 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 LSM11P83369 360 aaKnown RBP eCLIP7.35□□□□□ -1.23
CNOT1-204ENST00000563130 PDE4BQ07343 736 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 TAF1CQ15572 869 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-204ENST00000563130 TREML2Q5T2D2 321 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 KANSL2Q9H9L4 492 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 MKNK2Q9HBH9 465 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 MPHOSPH10O00566 681 aaKnown RBP7.35□□□□□ -1.23
CNOT1-204ENST00000563130 ORC4O43929 436 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 SLC3A2P08195 630 aaKnown RBP7.35□□□□□ -1.23
CNOT1-204ENST00000563130 HOXA7P31268 230 aaPredicted RBP7.35□□□□□ -1.23
CNOT1-204ENST00000563130 CTDSPL2Q05D32 466 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 CLEC10AQ8IUN9 316 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 STK11IPQ8N1F8 1099 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 NEDD1Q8NHV4 660 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 ZFYVE28Q9HCC9 887 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 INCENPQ9NQS7 918 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 TMX2Q9Y320 296 aa7.35□□□□□ -1.23
CNOT1-204ENST00000563130 MYH8P13535 1937 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 PPP1R3GB7ZBB8 358 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 PCP11498 1178 aaKnown RBP7.34□□□□□ -1.23
CNOT1-204ENST00000563130 NOVP48745 357 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 USP14P54578 494 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 ICA1Q05084 483 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 USP17L2Q6R6M4 530 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 C17orf99Q6UX52 265 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 GADL1Q6ZQY3 521 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 ZNF444Q8N0Y2 327 aaPredicted RBP7.34□□□□□ -1.23
CNOT1-204ENST00000563130 ZNF296Q8WUU4 475 aaPredicted RBP7.34□□□□□ -1.23
CNOT1-204ENST00000563130 STAG1Q8WVM7 1258 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 MAP4K1Q92918 833 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 NYAP2Q9P242 653 aa7.34□□□□□ -1.23
CNOT1-204ENST00000563130 CYP2C8P10632 490 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 BCRP11274 1271 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 EEF2P13639 858 aaKnown RBP7.34□□□□□ -1.24
CNOT1-204ENST00000563130 HAND2P61296 217 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 PTH1RQ03431 593 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 AKNAD1Q5T1N1 836 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 COL13A1Q5TAT6 717 aaPredicted RBP7.34□□□□□ -1.24
CNOT1-204ENST00000563130 TBC1D10CQ8IV04 446 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 MKL1Q969V6 931 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 PARK7Q99497 189 aaKnown RBP7.34□□□□□ -1.24
CNOT1-204ENST00000563130 ESYT1Q9BSJ8 1104 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 MTMR4Q9NYA4 1195 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 TMOD4Q9NZQ9 345 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 CTNNA3Q9UI47 895 aa7.34□□□□□ -1.24
CNOT1-204ENST00000563130 ZNF213O14771 459 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 VCAM1P19320 739 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 NT5C2P49902 561 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 TFAP4Q01664 338 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 PABPC4Q13310 644 aaKnown RBP eCLIP7.33□□□□□ -1.24
CNOT1-204ENST00000563130 FAM47AQ5JRC9 791 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 KIAA1755Q5JYT7 1200 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 NKX2-3Q8TAU0 364 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 LPAR1Q92633 364 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 CEP95Q96GE4 821 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 FEZ1Q99689 392 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 VCPKMTQ9H867 229 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 ARHGEF10LQ9HCE6 1279 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 IL17RBQ9NRM6 502 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 SYNPO2Q9UMS6 1093 aa7.33□□□□□ -1.24
CNOT1-204ENST00000563130 FKTNO75072 461 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 CDC45O75419 566 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 CYP21A2P08686 494 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 TSPY3P0CV98 308 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 TSPY8P0CW00 308 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 CAP1Q01518 475 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 SP3Q02447 781 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 ZYXQ15942 572 aaKnown RBP7.32□□□□□ -1.24
CNOT1-204ENST00000563130 IMMTQ16891 758 aaKnown RBP7.32□□□□□ -1.24
CNOT1-204ENST00000563130 DMRTA1Q5VZB9 504 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 MFSD6Q6ZSS7 791 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 LSG1Q9H089 658 aaKnown RBP7.32□□□□□ -1.24
CNOT1-204ENST00000563130 ASCC2Q9H1I8 757 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-204ENST00000563130 RNF41Q9H4P4 317 aaPredicted RBP7.32□□□□□ -1.24
CNOT1-204ENST00000563130 SH2D4AQ9H788 454 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 TCP11L1Q9NUJ3 509 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 PNMA3Q9UL41 463 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 CASP8AP2Q9UKL3 1982 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 LAMA4Q16363 1823 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 TSPY2A6NKD2 308 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 TK2O00142 265 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 TTLL1O95922 423 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 TSR1Q2NL82 804 aaKnown RBP7.32□□□□□ -1.24
CNOT1-204ENST00000563130 CATSPERGQ6ZRH7 1159 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 P2RX7Q99572 595 aaKnown RBP7.32□□□□□ -1.24
CNOT1-204ENST00000563130 SLC4A5Q9BY07 1137 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 CPA4Q9UI42 421 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 NEDD4P46934 1319 aa7.32□□□□□ -1.24
CNOT1-204ENST00000563130 USP17L15C9J2P7 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 USP17L13C9JLJ4 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 USP17L11C9JVI0 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 USP17L18D6R9N7 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 USP17L22D6RA61 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 USP17L17D6RBQ6 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 USP17L19D6RCP7 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 USP17L20D6RJB6 530 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 RANBP6O60518 1105 aaKnown RBP7.31□□□□□ -1.24
CNOT1-204ENST00000563130 NMT2O60551 498 aa7.31□□□□□ -1.24
CNOT1-204ENST00000563130 GCLCP48506 637 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms