RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 SPZ1Q9BXG8 430 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 PDCL3Q9H2J4 239 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 PRDM10Q9NQV6 1147 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 SH3GLB2Q9NR46 395 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 PIM2Q9P1W9 311 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 USP25Q9UHP3 1055 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 TRIM75PA6NK02 468 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 TTLL1O95922 423 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 VIL1P09327 827 aaKnown RBP10.79□□□□□ -0.68
LINC00838-201ENST00000562956 PTPREP23469 700 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 TGFB2P61812 414 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 HEATR3Q7Z4Q2 680 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 DNAJC25Q9H1X3 360 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 PI4KBQ9UBF8 816 aa10.79□□□□□ -0.68
LINC00838-201ENST00000562956 ZBTB12Q9Y330 459 aaPredicted RBP10.79□□□□□ -0.68
LINC00838-201ENST00000562956 FRMPD2Q68DX3 1309 aaPredicted RBP10.79□□□□□ -0.68
LINC00838-201ENST00000562956 FAM237AA0A1B0GTK4 181 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 STXBP3O00186 592 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 NPM3O75607 178 aaKnown RBP10.78□□□□□ -0.68
LINC00838-201ENST00000562956 SYKP43405 635 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 PIK3AP1Q6ZUJ8 805 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 LUZP1Q86V48 1076 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 GMLQ99445 158 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 UBA5Q9GZZ9 404 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 CBX8Q9HC52 389 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 BARHL2Q9NY43 387 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 BAZ2BQ9UIF8 2168 aaKnown RBP10.78□□□□□ -0.68
LINC00838-201ENST00000562956 MYH6P13533 1939 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 BLIDQ8IZY5 108 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 MTFR1LQ9H019 292 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 VAT1LQ9HCJ6 419 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 CEP131Q9UPN4 1083 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 AP5Z1O43299 807 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 SNHG28P0DPA3 235 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 CALML3P27482 149 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 POLD1P28340 1107 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 ZNF174Q15697 407 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 HOMER1Q86YM7 354 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 RASGRP4Q8TDF6 673 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 PPP1R1BQ9UD71 204 aaPredicted RBP10.78□□□□□ -0.68
LINC00838-201ENST00000562956 PCDHA4Q9UN74 947 aa10.78□□□□□ -0.68
LINC00838-201ENST00000562956 R3HCC1Q9Y3T6 440 aaKnown RBP10.78□□□□□ -0.68
LINC00838-201ENST00000562956 SRPRBQ9Y5M8 271 aaKnown RBP10.78□□□□□ -0.68
LINC00838-201ENST00000562956 SPDYE2BA6NHP3 402 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 M0R2N6 131 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 TPM2P07951 284 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 SPDYE6P0CI01 402 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 ATP2B2Q01814 1243 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 TTC38Q5R3I4 469 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 C11orf57Q6ZUT1 292 aaPredicted RBP10.77□□□□□ -0.69
LINC00838-201ENST00000562956 CCDC17Q96LX7 622 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 PIGSQ96S52 555 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 KIAA1468Q9P260 1216 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 KCNH3Q9ULD8 1083 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 ZNRF3Q9ULT6 936 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 NOL7Q9UMY1 257 aaKnown RBP10.77□□□□□ -0.69
LINC00838-201ENST00000562956 ZNF165P49910 485 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 R3HDM1Q15032 1099 aaKnown RBP10.77□□□□□ -0.69
LINC00838-201ENST00000562956 STX1AQ16623 288 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 CERKLQ49MI3 558 aaPredicted RBP10.77□□□□□ -0.69
LINC00838-201ENST00000562956 DALRD3Q5D0E6 543 aaKnown RBP10.77□□□□□ -0.69
LINC00838-201ENST00000562956 SOGA3Q5TF21 947 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 TATDN1Q6P1N9 297 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 NIM1KQ8IY84 436 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 RRP36Q96EU6 259 aaKnown RBP10.77□□□□□ -0.69
LINC00838-201ENST00000562956 CSRNP2Q9H175 543 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 VPS33BQ9H267 617 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 KIF13BQ9NQT8 1826 aa10.77□□□□□ -0.69
LINC00838-201ENST00000562956 CLRN2A0PK11 232 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 ENTPD3O75355 529 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 SMARCA1P28370 1054 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 LONRF3Q496Y0 759 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 ASPRV1Q53RT3 343 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
LINC00838-201ENST00000562956 TIGD1Q96MW7 591 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 RIOX1Q9H6W3 641 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 GPCPD1Q9NPB8 672 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 PCDHA6Q9UN73 950 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 PCDHA8Q9Y5H6 950 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 ATRNL1Q5VV63 1379 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 SIPA1L1O43166 1804 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 TCP10L2B9ZVM9 353 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 ADCY5O95622 1261 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 PLCB2Q00722 1185 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 USP49Q70CQ1 688 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 METTL16Q86W50 562 aaKnown RBP10.76□□□□□ -0.69
LINC00838-201ENST00000562956 FOXP4Q8IVH2 680 aaPredicted RBP10.76□□□□□ -0.69
LINC00838-201ENST00000562956 CCDC148Q8NFR7 591 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 TRIM34Q9BYJ4 488 aa10.76□□□□□ -0.69
LINC00838-201ENST00000562956 MORC2Q9Y6X9 1032 aaPredicted RBP10.76□□□□□ -0.69
LINC00838-201ENST00000562956 GDF11O95390 407 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 NAPAP54920 295 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 ZNF543Q08ER8 600 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 PTGDRQ13258 359 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 DLGAP5Q15398 846 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 OGFOD1Q8N543 542 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 DAGLBQ8NCG7 672 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 CSRNP1Q96S65 589 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 SEC63Q9UGP8 760 aaKnown RBP10.75□□□□□ -0.69
LINC00838-201ENST00000562956 ZHX1Q9UKY1 873 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms