RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 USP17L22D6RA61 530 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 USP17L17D6RBQ6 530 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 USP17L19D6RCP7 530 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 USP17L20D6RJB6 530 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 PRDM1O75626 825 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 VCAM1P19320 739 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 CCND3P30281 292 aaPredicted RBP19.65■□□□□ 0.74
CDT1-202ENST00000562747 MAGEA10P43363 369 aaPredicted RBP19.65■□□□□ 0.74
CDT1-202ENST00000562747 CACNB2Q08289 660 aaPredicted RBP19.65■□□□□ 0.74
CDT1-202ENST00000562747 USP17L24Q0WX57 530 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 MORN1Q5T089 497 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 GPR142Q7Z601 462 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 CLEC10AQ8IUN9 316 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 RUFY2Q8WXA3 655 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 SOCS4Q8WXH5 440 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 PAGR1Q9BTK6 254 aa19.65■□□□□ 0.74
CDT1-202ENST00000562747 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.65■□□□□ 0.74
CDT1-202ENST00000562747 CNMDO75829 334 aa19.64■□□□□ 0.73
CDT1-202ENST00000562747 XRCC5P13010 732 aaKnown RBP19.64■□□□□ 0.73
CDT1-202ENST00000562747 EEF2P13639 858 aaKnown RBP19.64■□□□□ 0.73
CDT1-202ENST00000562747 ZKSCAN1P17029 563 aaPredicted RBP19.64■□□□□ 0.73
CDT1-202ENST00000562747 CHMLP26374 656 aa19.64■□□□□ 0.73
CDT1-202ENST00000562747 MAPK4P31152 587 aa19.64■□□□□ 0.73
CDT1-202ENST00000562747 CTDSPL2Q05D32 466 aa19.64■□□□□ 0.73
CDT1-202ENST00000562747 GTF3C2Q8WUA4 911 aaPredicted RBP19.64■□□□□ 0.73
CDT1-202ENST00000562747 LPAR1Q92633 364 aa19.64■□□□□ 0.73
CDT1-202ENST00000562747 DSCC1Q9BVC3 393 aa19.64■□□□□ 0.73
CDT1-202ENST00000562747 PLIN4Q96Q06 1357 aa19.64■□□□□ 0.73
CDT1-202ENST00000562747 IGKV6D-41A0A0C4DH26 115 aa19.63■□□□□ 0.73
CDT1-202ENST00000562747 FGRP09769 529 aa19.63■□□□□ 0.73
CDT1-202ENST00000562747 TSPY3P0CV98 308 aa19.63■□□□□ 0.73
CDT1-202ENST00000562747 TSPY8P0CW00 308 aa19.63■□□□□ 0.73
CDT1-202ENST00000562747 COL6A1P12109 1028 aa19.63■□□□□ 0.73
CDT1-202ENST00000562747 CATSPERGQ6ZRH7 1159 aa19.63■□□□□ 0.73
CDT1-202ENST00000562747 NEDD1Q8NHV4 660 aa19.63■□□□□ 0.73
CDT1-202ENST00000562747 VCPKMTQ9H867 229 aa19.63■□□□□ 0.73
CDT1-202ENST00000562747 NYAP2Q9P242 653 aa19.63■□□□□ 0.73
CDT1-202ENST00000562747 ORC4O43929 436 aa19.62■□□□□ 0.73
CDT1-202ENST00000562747 PCP11498 1178 aaKnown RBP19.62■□□□□ 0.73
CDT1-202ENST00000562747 ATP2B2Q01814 1243 aa19.62■□□□□ 0.73
CDT1-202ENST00000562747 LHX8Q68G74 356 aa19.62■□□□□ 0.73
CDT1-202ENST00000562747 Q7L0L9 218 aa19.62■□□□□ 0.73
CDT1-202ENST00000562747 PLEKHH3Q7Z736 793 aa19.62■□□□□ 0.73
CDT1-202ENST00000562747 SLC17A8Q8NDX2 589 aa19.62■□□□□ 0.73
CDT1-202ENST00000562747 APBA2Q99767 749 aa19.62■□□□□ 0.73
CDT1-202ENST00000562747 RPAP3Q9H6T3 665 aaPredicted RBP19.62■□□□□ 0.73
CDT1-202ENST00000562747 RGS2P41220 211 aa19.61■□□□□ 0.73
CDT1-202ENST00000562747 TFAP4Q01664 338 aa19.61■□□□□ 0.73
CDT1-202ENST00000562747 BMP2KLQ5H9B9 411 aa19.61■□□□□ 0.73
CDT1-202ENST00000562747 PPP4R3BQ5MIZ7 849 aa19.61■□□□□ 0.73
CDT1-202ENST00000562747 IL25Q9H293 177 aa19.61■□□□□ 0.73
CDT1-202ENST00000562747 GOPCQ9HD26 462 aa19.61■□□□□ 0.73
CDT1-202ENST00000562747 FLRT1Q9NZU1 646 aa19.61■□□□□ 0.73
CDT1-202ENST00000562747 SYNPO2Q9UMS6 1093 aa19.61■□□□□ 0.73
CDT1-202ENST00000562747 TSPY2A6NKD2 308 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 ZNF213O14771 459 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 WDR46O15213 610 aaKnown RBP19.6■□□□□ 0.73
CDT1-202ENST00000562747 LRRC26Q2I0M4 334 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 FAM47AQ5JRC9 791 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 KIAA1755Q5JYT7 1200 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 LBX2Q6XYB7 198 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 TRMT44Q8IYL2 757 aaKnown RBP19.6■□□□□ 0.73
CDT1-202ENST00000562747 CEP95Q96GE4 821 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 MTMR4Q9NYA4 1195 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 CTNNA3Q9UI47 895 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 TACC3Q9Y6A5 838 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 LAMA4Q16363 1823 aa19.6■□□□□ 0.73
CDT1-202ENST00000562747 TTLL1O95922 423 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 HAND2P61296 217 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 LRIT3Q3SXY7 679 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 AKNAD1Q5T1N1 836 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 SKAP1Q86WV1 359 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 TDHQ8IZJ6 230 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 STAG1Q8WVM7 1258 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 MKL1Q969V6 931 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 RNF41Q9H4P4 317 aaPredicted RBP19.59■□□□□ 0.73
CDT1-202ENST00000562747 INCENPQ9NQS7 918 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 PPP4R2Q9NY27 417 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 A0A0G2JMZ2 1700 aa19.59■□□□□ 0.73
CDT1-202ENST00000562747 DLL1O00548 723 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 SGSM2O43147 1006 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 RANBP6O60518 1105 aaKnown RBP19.58■□□□□ 0.72
CDT1-202ENST00000562747 NT5C2P49902 561 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 MAP2K5Q13163 448 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 MFSD6Q6ZSS7 791 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 CCAR1Q8IX12 1150 aaKnown RBP19.58■□□□□ 0.72
CDT1-202ENST00000562747 SPICE1Q8N0Z3 855 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 DEFB123Q8N688 67 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 TANGO6Q9C0B7 1094 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 HOXC10Q9NYD6 342 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 BTBD7Q9P203 1132 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 CLIP2Q9UDT6 1046 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 RABGAP1Q9Y3P9 1069 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 MYH4Q9Y623 1939 aa19.58■□□□□ 0.72
CDT1-202ENST00000562747 RLFQ13129 1914 aa19.57■□□□□ 0.72
CDT1-202ENST00000562747 COG2Q14746 738 aa19.57■□□□□ 0.72
CDT1-202ENST00000562747 IMMTQ16891 758 aaKnown RBP19.57■□□□□ 0.72
CDT1-202ENST00000562747 GPR153Q6NV75 609 aa19.57■□□□□ 0.72
CDT1-202ENST00000562747 TBC1D10CQ8IV04 446 aa19.57■□□□□ 0.72
CDT1-202ENST00000562747 UBE2OQ9C0C9 1292 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms