RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 ACLYP53396 1101 aa22.36■■□□□ 1.17
KATNB1-202ENST00000562542 MAP3K12Q12852 859 aa22.36■■□□□ 1.17
KATNB1-202ENST00000562542 PPIGQ13427 754 aaKnown RBP eCLIP22.36■■□□□ 1.175e-8■■■■□ 24.8
KATNB1-202ENST00000562542 CNPY2Q9Y2B0 182 aa22.36■■□□□ 1.17
KATNB1-202ENST00000562542 APBB1O00213 710 aa22.35■■□□□ 1.17
KATNB1-202ENST00000562542 KCTD2Q14681 263 aa22.35■■□□□ 1.17
KATNB1-202ENST00000562542 KIAA1755Q5JYT7 1200 aa22.35■■□□□ 1.17
KATNB1-202ENST00000562542 MFSD5Q6N075 450 aa22.35■■□□□ 1.17
KATNB1-202ENST00000562542 TSEN34Q9BSV6 310 aaKnown RBP22.35■■□□□ 1.17
KATNB1-202ENST00000562542 DBNLQ9UJU6 430 aaKnown RBP22.35■■□□□ 1.17
KATNB1-202ENST00000562542 SURF6O75683 361 aaKnown RBP22.34■■□□□ 1.17
KATNB1-202ENST00000562542 RARSP54136 660 aaKnown RBP22.34■■□□□ 1.17
KATNB1-202ENST00000562542 TMEM132BQ14DG7 1078 aa22.34■■□□□ 1.17
KATNB1-202ENST00000562542 TMEM179Q6ZVK1 233 aa22.34■■□□□ 1.17
KATNB1-202ENST00000562542 CCDC8Q9H0W5 538 aaPredicted RBP22.34■■□□□ 1.17
KATNB1-202ENST00000562542 ARHGEF10LQ9HCE6 1279 aa22.34■■□□□ 1.17
KATNB1-202ENST00000562542 MCM9Q9NXL9 1143 aa22.34■■□□□ 1.17
KATNB1-202ENST00000562542 TLR7Q9NYK1 1049 aaKnown RBP22.34■■□□□ 1.17
KATNB1-202ENST00000562542 ROBO3Q96MS0 1386 aa22.34■■□□□ 1.17
KATNB1-202ENST00000562542 SMCHD1A6NHR9 2005 aa22.33■■□□□ 1.17
KATNB1-202ENST00000562542 ADAMTS4O75173 837 aa22.33■■□□□ 1.17
KATNB1-202ENST00000562542 ZNF865P0CJ78 1059 aaPredicted RBP22.33■■□□□ 1.17
KATNB1-202ENST00000562542 GABPAQ06546 454 aa22.33■■□□□ 1.17
KATNB1-202ENST00000562542 TMEM240Q5SV17 173 aa22.33■■□□□ 1.17
KATNB1-202ENST00000562542 TRMT2AQ8IZ69 625 aaKnown RBP22.33■■□□□ 1.17
KATNB1-202ENST00000562542 SH2D4AQ9H788 454 aa22.33■■□□□ 1.17
KATNB1-202ENST00000562542 MSRAQ9UJ68 235 aa22.33■■□□□ 1.17
KATNB1-202ENST00000562542 TBX21Q9UL17 535 aa22.33■■□□□ 1.17
KATNB1-202ENST00000562542 MROH7Q68CQ1 1323 aa22.32■■□□□ 1.16
KATNB1-202ENST00000562542 SYNRGQ9UMZ2 1314 aa22.32■■□□□ 1.16
KATNB1-202ENST00000562542 MAGEB6P1A0A0J9YX57 407 aa22.32■■□□□ 1.16
KATNB1-202ENST00000562542 MOXD2PA6NHM9 499 aa22.32■■□□□ 1.16
KATNB1-202ENST00000562542 KCNA10Q16322 511 aa22.32■■□□□ 1.16
KATNB1-202ENST00000562542 TMEM199Q8N511 208 aa22.32■■□□□ 1.16
KATNB1-202ENST00000562542 VTI1AQ96AJ9 217 aa22.32■■□□□ 1.16
KATNB1-202ENST00000562542 GLT1D1Q96MS3 346 aa22.32■■□□□ 1.16
KATNB1-202ENST00000562542 CRNKL1Q9BZJ0 848 aaKnown RBP22.32■■□□□ 1.16
KATNB1-202ENST00000562542 TSPYL2Q9H2G4 693 aaPredicted RBP22.32■■□□□ 1.16
KATNB1-202ENST00000562542 DIS3Q9Y2L1 958 aaKnown RBP22.32■■□□□ 1.16
KATNB1-202ENST00000562542 IPO8O15397 1037 aaKnown RBP22.31■■□□□ 1.16
KATNB1-202ENST00000562542 ACRP10323 421 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 CSF2RAP15509 400 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 EVX2Q03828 476 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 ICA1Q05084 483 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 ADGRE1Q14246 886 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 RAB30Q15771 203 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 ZNF792Q3KQV3 632 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 PSRC1Q6PGN9 363 aaPredicted RBP22.31■■□□□ 1.16
KATNB1-202ENST00000562542 C16orf59Q7L2K0 433 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 CLEC10AQ8IUN9 316 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 RIOK1Q9BRS2 568 aaKnown RBP22.31■■□□□ 1.16
KATNB1-202ENST00000562542 ANTXR1Q9H6X2 564 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 VCPKMTQ9H867 229 aa22.31■■□□□ 1.16
KATNB1-202ENST00000562542 WDR46O15213 610 aaKnown RBP22.3■■□□□ 1.16
KATNB1-202ENST00000562542 TRIM27P14373 513 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 POLA2Q14181 598 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 TMED8Q6PL24 325 aaPredicted RBP22.3■■□□□ 1.16
KATNB1-202ENST00000562542 ZNF365Q70YC5 407 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 RIOX2Q8IUF8 465 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 FRAT1Q92837 279 aaPredicted RBP22.3■■□□□ 1.16
KATNB1-202ENST00000562542 CLUAP1Q96AJ1 413 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 PPP1R12CQ9BZL4 782 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 ZHX1Q9UKY1 873 aaPredicted RBP22.3■■□□□ 1.16
KATNB1-202ENST00000562542 FAM184BQ9ULE4 1060 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 TMX2Q9Y320 296 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 NAV1Q8NEY1 1877 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 PLXNA1Q9UIW2 1896 aa22.3■■□□□ 1.16
KATNB1-202ENST00000562542 BCAR3O75815 825 aa22.29■■□□□ 1.16
KATNB1-202ENST00000562542 STAT3P40763 770 aa22.29■■□□□ 1.16
KATNB1-202ENST00000562542 MICALL1Q8N3F8 863 aa22.29■■□□□ 1.16
KATNB1-202ENST00000562542 NECAB3Q96P71 396 aaPredicted RBP22.29■■□□□ 1.16
KATNB1-202ENST00000562542 C1QTNF1Q9BXJ1 281 aa22.29■■□□□ 1.16
KATNB1-202ENST00000562542 SLC28A3Q9HAS3 691 aa22.29■■□□□ 1.16
KATNB1-202ENST00000562542 BDP1A6H8Y1 2624 aa22.29■■□□□ 1.16
KATNB1-202ENST00000562542 ZNFX1Q9P2E3 1918 aaKnown RBP22.28■■□□□ 1.16
KATNB1-202ENST00000562542 RAD21O60216 631 aa22.28■■□□□ 1.16
KATNB1-202ENST00000562542 RASIP1Q5U651 963 aa22.28■■□□□ 1.16
KATNB1-202ENST00000562542 KLHDC9Q8NEP7 349 aa22.28■■□□□ 1.16
KATNB1-202ENST00000562542 MTIF3Q9H2K0 278 aaKnown RBP22.28■■□□□ 1.16
KATNB1-202ENST00000562542 NKX2-4Q9H2Z4 354 aa22.28■■□□□ 1.16
KATNB1-202ENST00000562542 FBXO28Q9NVF7 368 aa22.28■■□□□ 1.16
KATNB1-202ENST00000562542 SWAP70Q9UH65 585 aa22.28■■□□□ 1.16
KATNB1-202ENST00000562542 TNNQ9UQP3 1299 aa22.28■■□□□ 1.16
KATNB1-202ENST00000562542 ELP1O95163 1332 aa22.28■■□□□ 1.16
KATNB1-202ENST00000562542 CHD9Q3L8U1 2897 aa22.27■■□□□ 1.16
KATNB1-202ENST00000562542 C6orf222P0C671 652 aaPredicted RBP22.27■■□□□ 1.16
KATNB1-202ENST00000562542 CYP2D6P10635 497 aa22.27■■□□□ 1.16
KATNB1-202ENST00000562542 COPB2P35606 906 aa22.27■■□□□ 1.16
KATNB1-202ENST00000562542 SSH3Q8TE77 659 aa22.27■■□□□ 1.16
KATNB1-202ENST00000562542 EAF2Q96CJ1 260 aaPredicted RBP22.27■■□□□ 1.16
KATNB1-202ENST00000562542 SPC25Q9HBM1 224 aa22.27■■□□□ 1.16
KATNB1-202ENST00000562542 MYADML2A6NDP7 307 aa22.26■■□□□ 1.15
KATNB1-202ENST00000562542 TLR3O15455 904 aaKnown RBP22.26■■□□□ 1.15
KATNB1-202ENST00000562542 AKR1B1P15121 316 aa22.26■■□□□ 1.15
KATNB1-202ENST00000562542 SIAH1Q8IUQ4 282 aa22.26■■□□□ 1.15
KATNB1-202ENST00000562542 PCSK9Q8NBP7 692 aaKnown RBP22.26■■□□□ 1.15
KATNB1-202ENST00000562542 SDR42E1Q8WUS8 393 aa22.26■■□□□ 1.15
KATNB1-202ENST00000562542 DYNLL2Q96FJ2 89 aa22.26■■□□□ 1.15
KATNB1-202ENST00000562542 A0A0U1RQG5 324 aaPredicted RBP22.25■■□□□ 1.15
KATNB1-202ENST00000562542 VWA5AO00534 786 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms