RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GMCL1Q96IK5 515 aa19.68■□□□□ 0.74
CLK3-207ENST00000562389 ZSCAN10Q96SZ4 725 aaPredicted RBP19.68■□□□□ 0.74
CLK3-207ENST00000562389 NUP88Q99567 741 aaPredicted RBP19.68■□□□□ 0.74
CLK3-207ENST00000562389 ZKSCAN3Q9BRR0 538 aa19.68■□□□□ 0.74
CLK3-207ENST00000562389 MCOLN1Q9GZU1 580 aa19.68■□□□□ 0.74
CLK3-207ENST00000562389 REC8O95072 547 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 PSMC4P43686 418 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 FCGRTP55899 365 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 RNF20Q5VTR2 975 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 RALYLQ86SE5 291 aaKnown RBP19.67■□□□□ 0.74
CLK3-207ENST00000562389 TNS4Q8IZW8 715 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 MB21D1Q8N884 522 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 ANKS1AQ92625 1134 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 TRIM47Q96LD4 638 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 PAGR1Q9BTK6 254 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 PPP1R9AQ9ULJ8 1098 aa19.67■□□□□ 0.74
CLK3-207ENST00000562389 BMP3P12645 472 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 SLC1A4P43007 532 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 CYB5R4Q7L1T6 521 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 ATG4CQ96DT6 458 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 SLF1Q9BQI6 1058 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 UBAC1Q9BSL1 405 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 FBXO28Q9NVF7 368 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 BTBD7Q9P203 1132 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 ADAMTS5Q9UNA0 930 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 TNKSO95271 1327 aa19.66■□□□□ 0.74
CLK3-207ENST00000562389 EPB41L2O43491 1005 aaKnown RBP19.65■□□□□ 0.74
CLK3-207ENST00000562389 PEX10O60683 326 aa19.65■□□□□ 0.74
CLK3-207ENST00000562389 FMNL1O95466 1100 aaPredicted RBP19.65■□□□□ 0.74
CLK3-207ENST00000562389 Q3C1V9 767 aa19.65■□□□□ 0.74
CLK3-207ENST00000562389 FBXO46Q6PJ61 603 aaPredicted RBP19.65■□□□□ 0.74
CLK3-207ENST00000562389 MB21D2Q8IYB1 491 aaPredicted RBP19.65■□□□□ 0.74
CLK3-207ENST00000562389 ENAHQ8N8S7 591 aaPredicted RBP19.65■□□□□ 0.74
CLK3-207ENST00000562389 DCAF4Q8WV16 495 aa19.65■□□□□ 0.74
CLK3-207ENST00000562389 FEM1BQ9UK73 627 aa19.65■□□□□ 0.74
CLK3-207ENST00000562389 DOCK3Q8IZD9 2030 aa19.64■□□□□ 0.74
CLK3-207ENST00000562389 PLA2G6O60733 806 aa19.64■□□□□ 0.73
CLK3-207ENST00000562389 MCCP23508 829 aa19.64■□□□□ 0.73
CLK3-207ENST00000562389 HOXD10P28358 340 aa19.64■□□□□ 0.73
CLK3-207ENST00000562389 PRMT2P55345 433 aa19.64■□□□□ 0.73
CLK3-207ENST00000562389 SEC23AQ15436 765 aa19.64■□□□□ 0.73
CLK3-207ENST00000562389 PTPN22Q9Y2R2 807 aa19.64■□□□□ 0.73
CLK3-207ENST00000562389 TNPO2O14787 897 aaKnown RBP19.63■□□□□ 0.73
CLK3-207ENST00000562389 ECM2O94769 699 aaPredicted RBP19.63■□□□□ 0.73
CLK3-207ENST00000562389 MAPK4P31152 587 aa19.63■□□□□ 0.73
CLK3-207ENST00000562389 CCNA1P78396 465 aa19.63■□□□□ 0.73
CLK3-207ENST00000562389 TSGA10IPQ3SY00 556 aa19.63■□□□□ 0.73
CLK3-207ENST00000562389 RASGRP2Q7LDG7 609 aa19.63■□□□□ 0.73
CLK3-207ENST00000562389 FAM160B2Q86V87 743 aa19.63■□□□□ 0.73
CLK3-207ENST00000562389 PRPF38AQ8NAV1 312 aaKnown RBP19.63■□□□□ 0.73
CLK3-207ENST00000562389 KAT14Q9H8E8 782 aa19.63■□□□□ 0.73
CLK3-207ENST00000562389 SRRDQ9UH36 339 aa19.63■□□□□ 0.73
CLK3-207ENST00000562389 PLXNB2O15031 1838 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 TMEM232C9JQI7 657 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 VWA5AO00534 786 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 SNHG28P0DPA3 235 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 PDHBP11177 359 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 STAT2P52630 851 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 ANTXR2P58335 489 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 IFIT1BQ5T764 474 aaKnown RBP19.62■□□□□ 0.73
CLK3-207ENST00000562389 SAMD1Q6SPF0 538 aaPredicted RBP19.62■□□□□ 0.73
CLK3-207ENST00000562389 PNMA1Q8ND90 353 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 REPS2Q8NFH8 660 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 KCNB2Q92953 911 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 COA7Q96BR5 231 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 MTA3Q9BTC8 594 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 SPATC1LQ9H0A9 340 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 PORCNQ9H237 461 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 MTMR7Q9Y216 660 aa19.62■□□□□ 0.73
CLK3-207ENST00000562389 ERICH2A1L162 156 aa19.61■□□□□ 0.73
CLK3-207ENST00000562389 ZKSCAN1P17029 563 aaPredicted RBP19.61■□□□□ 0.73
CLK3-207ENST00000562389 HSPA4P34932 840 aa19.61■□□□□ 0.73
CLK3-207ENST00000562389 TMEM132BQ14DG7 1078 aa19.61■□□□□ 0.73
CLK3-207ENST00000562389 SART3Q15020 963 aaKnown RBP19.61■□□□□ 0.73
CLK3-207ENST00000562389 CCDC96Q2M329 555 aa19.61■□□□□ 0.73
CLK3-207ENST00000562389 KCTD1Q719H9 257 aa19.61■□□□□ 0.73
CLK3-207ENST00000562389 CHURC1Q8WUH1 139 aa19.61■□□□□ 0.73
CLK3-207ENST00000562389 ISY1Q9ULR0 285 aaKnown RBP19.61■□□□□ 0.73
CLK3-207ENST00000562389 IFIT3O14879 490 aaKnown RBP19.6■□□□□ 0.73
CLK3-207ENST00000562389 FDX1P10109 184 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 MCM5P33992 734 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 PRKCZQ05513 592 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 KRT32Q14532 448 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 CHST3Q7LGC8 479 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 RASEFQ8IZ41 740 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 SHCBP1Q8NEM2 672 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 KIFC2Q96AC6 838 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 CHMP4CQ96CF2 233 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 MOV10L1Q9BXT6 1211 aaKnown RBP19.6■□□□□ 0.73
CLK3-207ENST00000562389 PTCH2Q9Y6C5 1203 aa19.6■□□□□ 0.73
CLK3-207ENST00000562389 ZNF543Q08ER8 600 aa19.59■□□□□ 0.73
CLK3-207ENST00000562389 IKQ13123 557 aaPredicted RBP19.59■□□□□ 0.73
CLK3-207ENST00000562389 BTNL9Q6UXG8 535 aa19.59■□□□□ 0.73
CLK3-207ENST00000562389 GPR142Q7Z601 462 aa19.59■□□□□ 0.73
CLK3-207ENST00000562389 CCAR1Q8IX12 1150 aaKnown RBP19.59■□□□□ 0.73
CLK3-207ENST00000562389 IGDCC4Q8TDY8 1250 aa19.59■□□□□ 0.73
CLK3-207ENST00000562389 SLC38A10Q9HBR0 1119 aa19.59■□□□□ 0.73
CLK3-207ENST00000562389 ZNF214Q9UL59 606 aaPredicted RBP19.59■□□□□ 0.73
CLK3-207ENST00000562389 GABRQQ9UN88 632 aa19.59■□□□□ 0.73
CLK3-207ENST00000562389 HPS5Q9UPZ3 1129 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms