RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
SMG1-205ENST00000561947 KLRF2D3W0D1 207 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 NEMFO60524 1076 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 BMP6P22004 513 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 PICALMQ13492 652 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 DNTTIP2Q5QJE6 756 aaKnown RBP11.19□□□□□ -0.62
SMG1-205ENST00000561947 MSL1Q68DK7 614 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 GALNT17Q6IS24 598 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 CCDC34Q96HJ3 373 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 EPSTI1Q96J88 318 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 HSD3B7Q9H2F3 369 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 IFNKQ9P0W0 207 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 A0A087X0B3 334 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 M0R2N6 131 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 STXBP3O00186 592 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 PARP1P09874 1014 aaKnown RBP11.19□□□□□ -0.62
SMG1-205ENST00000561947 GOLGA8HP0CJ92 632 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 GABPAQ06546 454 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 LRRC8AQ8IWT6 810 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 GRAMD1CQ8IYS0 662 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 TRIML1Q8N9V2 468 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 DHX58Q96C10 678 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 MXD3Q9BW11 206 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 XPO4Q9C0E2 1151 aaKnown RBP11.19□□□□□ -0.62
SMG1-205ENST00000561947 BARHL2Q9NY43 387 aa11.19□□□□□ -0.62
SMG1-205ENST00000561947 VWA3AA6NCI4 1184 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 G3V3G9 751 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 SMC2O95347 1197 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 SLFN14P0C7P3 912 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 MORC3Q14149 939 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 DCAF8Q5TAQ9 597 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 HHIPL2Q6UWX4 724 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 HEATR3Q7Z4Q2 680 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 C2CD5Q86YS7 1000 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 SPATA20Q8TB22 786 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 ZNF622Q969S3 477 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMG1-205ENST00000561947 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
SMG1-205ENST00000561947 IMPACTQ9P2X3 320 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 ZNF646O15015 1829 aaPredicted RBP11.18□□□□□ -0.62
SMG1-205ENST00000561947 MYO1BO43795 1136 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 SMARCA1P28370 1054 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 LMOD1P29536 600 aaPredicted RBP11.18□□□□□ -0.62
SMG1-205ENST00000561947 MCM7P33993 719 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 FANCCQ00597 558 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 RASGRP2Q7LDG7 609 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 SH3RF1Q7Z6J0 888 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 MLKLQ8NB16 471 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 OSBPL5Q9H0X9 879 aaPredicted RBP11.18□□□□□ -0.62
SMG1-205ENST00000561947 USP40Q9NVE5 1235 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 DACH1Q9UI36 760 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 PCDHA6Q9UN73 950 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 PCDHA8Q9Y5H6 950 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 SLX4Q8IY92 1834 aa11.18□□□□□ -0.62
SMG1-205ENST00000561947 CCDC194A0A1B0GVG4 234 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 SCNN1DP51172 638 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 ARL6IP4Q66PJ3 421 aaKnown RBP11.17□□□□□ -0.62
SMG1-205ENST00000561947 STYK1Q6J9G0 422 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 FILIP1Q7Z7B0 1213 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 RASGRP4Q8TDF6 673 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 TEKT1Q969V4 418 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 C10orf71Q711Q0 1435 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 GSDMDP57764 484 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 ARID5BQ14865 1188 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 CDC42EP5Q6NZY7 148 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 USP17L2Q6R6M4 530 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 PODNQ7Z5L7 613 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 C4orf32Q8N8J7 132 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
SMG1-205ENST00000561947 GREB1LQ9C091 1923 aaPredicted RBP11.17□□□□□ -0.62
SMG1-205ENST00000561947 MYO3BQ8WXR4 1341 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 IGKV6D-41A0A0C4DH26 115 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 ATP1A3P13637 1013 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 RXRBP28702 533 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 IL17AQ16552 155 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 CCDC12Q8WUD4 166 aaPredicted RBP11.16□□□□□ -0.62
SMG1-205ENST00000561947 RRP36Q96EU6 259 aaKnown RBP11.16□□□□□ -0.62
SMG1-205ENST00000561947 PAGE5Q96GU1 130 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 PYM1Q9BRP8 204 aaKnown RBP11.16□□□□□ -0.62
SMG1-205ENST00000561947 CPVLQ9H3G5 476 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 MTMR4Q9NYA4 1195 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 SCN9AQ15858 1988 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 H0YIN7 160 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 CBFA2T2O43439 604 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 AKR1B1P15121 316 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 APOBEC3HQ6NTF7 200 aaKnown RBP11.16□□□□□ -0.62
SMG1-205ENST00000561947 TMC6Q7Z403 805 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 ZMYND12Q9H0C1 365 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 DBNDD1Q9H9R9 158 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 SERPINB13Q9UIV8 391 aa11.16□□□□□ -0.62
SMG1-205ENST00000561947 MYH4Q9Y623 1939 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 LONP1P36776 959 aaKnown RBP11.15□□□□□ -0.62
SMG1-205ENST00000561947 AFMP43652 599 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 CRKP46108 304 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 NAPAP54920 295 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 E2F4Q16254 413 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 FANCLQ9NW38 375 aa11.15□□□□□ -0.62
SMG1-205ENST00000561947 SEC63Q9UGP8 760 aaKnown RBP11.15□□□□□ -0.62
SMG1-205ENST00000561947 SIPA1L1O43166 1804 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms