RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TSPY2A6NKD2 308 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 SEMA3EO15041 775 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 HIBADHP31937 336 aaKnown RBP12.42□□□□□ -0.42
NEIL1-202ENST00000561643 DPYDQ12882 1025 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 NPY5RQ15761 445 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 CT47A1Q5JQC4 288 aaPredicted RBP12.42□□□□□ -0.42
NEIL1-202ENST00000561643 LINC00116Q8NCU8 138 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 TNFRSF25Q93038 417 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 JAG2Q9Y219 1238 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
NEIL1-202ENST00000561643 PARP3Q9Y6F1 533 aa12.42□□□□□ -0.42
NEIL1-202ENST00000561643 LAMB2P55268 1798 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 WNK3Q9BYP7 1800 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 ORC4O43929 436 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 CYP2D6P10635 497 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 SCG2P13521 617 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 OAS2P29728 719 aaKnown RBP12.41□□□□□ -0.42
NEIL1-202ENST00000561643 PRDX5P30044 214 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 MCM7P33993 719 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 RPS8P62241 208 aaKnown RBP12.41□□□□□ -0.42
NEIL1-202ENST00000561643 ATP2C1P98194 919 aaPredicted RBP12.41□□□□□ -0.42
NEIL1-202ENST00000561643 FILIP1LQ4L180 1135 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 SMIM5Q71RC9 77 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 IGSF22Q8N9C0 903 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 CPLX3Q8WVH0 158 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 CUL4BQ13620 913 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 TBC1D9BQ66K14 1250 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 IQUBQ8NA54 791 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 WDR24Q96S15 920 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 BLZF1Q9H2G9 400 aa12.41□□□□□ -0.42
NEIL1-202ENST00000561643 BAZ2BQ9UIF8 2168 aaKnown RBP12.4□□□□□ -0.42
NEIL1-202ENST00000561643 KARSQ15046 597 aaKnown RBP12.4□□□□□ -0.42
NEIL1-202ENST00000561643 NLRP3Q96P20 1036 aa12.4□□□□□ -0.42
NEIL1-202ENST00000561643 CTAGE1Q96RT6 745 aa12.4□□□□□ -0.42
NEIL1-202ENST00000561643 EPC1Q9H2F5 836 aa12.4□□□□□ -0.42
NEIL1-202ENST00000561643 ATP8A2Q9NTI2 1148 aa12.4□□□□□ -0.42
NEIL1-202ENST00000561643 ARGLU1Q9NWB6 273 aaPredicted RBP12.4□□□□□ -0.42
NEIL1-202ENST00000561643 CTNND2Q9UQB3 1225 aa12.4□□□□□ -0.42
NEIL1-202ENST00000561643 TAF1P21675 1872 aa12.4□□□□□ -0.42
NEIL1-202ENST00000561643 ZRANB2O95218 330 aaKnown RBP eCLIP12.4□□□□□ -0.42
NEIL1-202ENST00000561643 CCDC24Q8N4L8 307 aa12.4□□□□□ -0.42
NEIL1-202ENST00000561643 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.42
NEIL1-202ENST00000561643 PPP1R3GB7ZBB8 358 aa12.4□□□□□ -0.43
NEIL1-202ENST00000561643 CCDC175P0C221 793 aa12.4□□□□□ -0.43
NEIL1-202ENST00000561643 MTF1Q14872 753 aa12.4□□□□□ -0.43
NEIL1-202ENST00000561643 MCM9Q9NXL9 1143 aa12.4□□□□□ -0.43
NEIL1-202ENST00000561643 RREB1Q92766 1687 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 ROBO1Q9Y6N7 1651 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 SOWAHDA6NJG2 315 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 COBLO75128 1261 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 TADA3O75528 432 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 KIF5BP33176 963 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 TRAPPC10P48553 1259 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 RBL2Q08999 1139 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 PFKFB3Q16875 520 aaPredicted RBP12.39□□□□□ -0.43
NEIL1-202ENST00000561643 RRAGBQ5VZM2 374 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 ICE2Q659A1 982 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 APTXQ7Z2E3 356 aaKnown RBP12.39□□□□□ -0.43
NEIL1-202ENST00000561643 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
NEIL1-202ENST00000561643 DZIP1Q86YF9 867 aaKnown RBP12.39□□□□□ -0.43
NEIL1-202ENST00000561643 PANX2Q96RD6 677 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 YY1AP1Q9H869 796 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 ADD3Q9UEY8 706 aaKnown RBP12.39□□□□□ -0.43
NEIL1-202ENST00000561643 XDHP47989 1333 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 EFCAB8A8MWE9 144 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 VEGFAP15692 232 aaPredicted RBP12.39□□□□□ -0.43
NEIL1-202ENST00000561643 GPS2Q13227 327 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 CDKAL1Q5VV42 579 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
NEIL1-202ENST00000561643 GEMIN8Q9NWZ8 242 aaKnown RBP12.39□□□□□ -0.43
NEIL1-202ENST00000561643 SASH3O75995 380 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 LMAN1P49257 510 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 MMP14P50281 582 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 SLC10A5Q5PT55 438 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 PYM1Q9BRP8 204 aaKnown RBP12.38□□□□□ -0.43
NEIL1-202ENST00000561643 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 BCCIPQ9P287 314 aaKnown RBP eCLIP12.38□□□□□ -0.43
NEIL1-202ENST00000561643 RRP15Q9Y3B9 282 aaKnown RBP12.38□□□□□ -0.43
NEIL1-202ENST00000561643 LTBP4Q8N2S1 1624 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 CCT6AP40227 531 aaKnown RBP12.38□□□□□ -0.43
NEIL1-202ENST00000561643 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
NEIL1-202ENST00000561643 CCDC12Q8WUD4 166 aaPredicted RBP12.38□□□□□ -0.43
NEIL1-202ENST00000561643 TPM1P09493 284 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 USP17L8P0C7I0 530 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 CALML3P27482 149 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 TXLNAP40222 546 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 E2F4Q16254 413 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 SRLQ86TD4 932 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 DRC1Q96MC2 740 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 MRPL44Q9H9J2 332 aaKnown RBP12.38□□□□□ -0.43
NEIL1-202ENST00000561643 LZTFL1Q9NQ48 299 aa12.38□□□□□ -0.43
NEIL1-202ENST00000561643 SRP68Q9UHB9 627 aaKnown RBP12.38□□□□□ -0.43
NEIL1-202ENST00000561643 COL22A1Q8NFW1 1626 aaPredicted RBP12.37□□□□□ -0.43
NEIL1-202ENST00000561643 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
NEIL1-202ENST00000561643 TFAP4Q01664 338 aa12.37□□□□□ -0.43
NEIL1-202ENST00000561643 PPP2R3AQ06190 1150 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms