RNA–Protein interactions for RNA: ENST00000561554.5

RPL4-202, Transcript of ribosomal protein L4, humanhuman

TSL 4

Gene RPL4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-202ENST00000561554 TIMP1P01033 207 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 COPB2P35606 906 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 PLCD1P51178 756 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 MAP3K12Q12852 859 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 POLA2Q14181 598 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 MFSD5Q6N075 450 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 TMEM179Q6ZVK1 233 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 MSL3Q8N5Y2 521 aaKnown RBP13.19□□□□□ -0.3
RPL4-202ENST00000561554 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 CDCA7LQ96GN5 454 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 SH2D4AQ9H788 454 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 TBX21Q9UL17 535 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 ADAMTS5Q9UNA0 930 aa13.19□□□□□ -0.3
RPL4-202ENST00000561554 ARIH1Q9Y4X5 557 aaPredicted RBP13.19□□□□□ -0.3
RPL4-202ENST00000561554 PARP14Q460N5 1801 aa13.18□□□□□ -0.3
RPL4-202ENST00000561554 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
RPL4-202ENST00000561554 ADAMTS4O75173 837 aa13.18□□□□□ -0.3
RPL4-202ENST00000561554 IDH1O75874 414 aaKnown RBP13.18□□□□□ -0.3
RPL4-202ENST00000561554 RARSP54136 660 aaKnown RBP13.18□□□□□ -0.3
RPL4-202ENST00000561554 MRPS5P82675 430 aaKnown RBP13.18□□□□□ -0.3
RPL4-202ENST00000561554 PPIGQ13427 754 aaKnown RBP eCLIP13.18□□□□□ -0.3
RPL4-202ENST00000561554 MAGEB6Q8N7X4 407 aa13.18□□□□□ -0.3
RPL4-202ENST00000561554 SPRYD3Q8NCJ5 442 aa13.18□□□□□ -0.3
RPL4-202ENST00000561554 ADAMTS19Q8TE59 1207 aa13.18□□□□□ -0.3
RPL4-202ENST00000561554 SSH3Q8TE77 659 aa13.18□□□□□ -0.3
RPL4-202ENST00000561554 STARD7Q9NQZ5 370 aa13.18□□□□□ -0.3
RPL4-202ENST00000561554 PLXNA1Q9UIW2 1896 aa13.18□□□□□ -0.3
RPL4-202ENST00000561554 ELP1O95163 1332 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 WDR46O15213 610 aaKnown RBP13.17□□□□□ -0.3
RPL4-202ENST00000561554 FLOT1O75955 427 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 PGK1P00558 417 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
RPL4-202ENST00000561554 ZNF865P0CJ78 1059 aaPredicted RBP13.17□□□□□ -0.3
RPL4-202ENST00000561554 PLS1Q14651 629 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 ZNF792Q3KQV3 632 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 RIOX2Q8IUF8 465 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 FAM122AQ96E09 287 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.17□□□□□ -0.39e-21■□□□□ 10.8
RPL4-202ENST00000561554 RIOK1Q9BRS2 568 aaKnown RBP13.17□□□□□ -0.3
RPL4-202ENST00000561554 PBX4Q9BYU1 374 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 SWAP70Q9UH65 585 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 DBNLQ9UJU6 430 aaKnown RBP13.17□□□□□ -0.3
RPL4-202ENST00000561554 NOP58Q9Y2X3 529 aaKnown RBP13.17□□□□□ -0.3
RPL4-202ENST00000561554 TMX2Q9Y320 296 aa13.17□□□□□ -0.3
RPL4-202ENST00000561554 NAV1Q8NEY1 1877 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 CHD7Q9P2D1 2997 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 CST5P28325 142 aaPredicted RBP13.16□□□□□ -0.3
RPL4-202ENST00000561554 ACLYP53396 1101 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 OS9Q13438 667 aaPredicted RBP13.16□□□□□ -0.3
RPL4-202ENST00000561554 KCTD2Q14681 263 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 TMEM132BQ14DG7 1078 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 RAB30Q15771 203 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 CCSAPQ6IQ19 270 aaPredicted RBP13.16□□□□□ -0.3
RPL4-202ENST00000561554 PSRC1Q6PGN9 363 aaPredicted RBP13.16□□□□□ -0.3
RPL4-202ENST00000561554 ATG4CQ96DT6 458 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 UHRF1Q96T88 793 aaPredicted RBP13.16□□□□□ -0.3
RPL4-202ENST00000561554 MMP19Q99542 508 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 VCPKMTQ9H867 229 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 CNPY2Q9Y2B0 182 aa13.16□□□□□ -0.3
RPL4-202ENST00000561554 SYNGAP1Q96PV0 1343 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 MPHOSPH10O00566 681 aaKnown RBP13.15□□□□□ -0.3
RPL4-202ENST00000561554 DUSP11O75319 330 aaKnown RBP13.15□□□□□ -0.3
RPL4-202ENST00000561554 TRIM27P14373 513 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 CDK7P50613 346 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 KIAA1755Q5JYT7 1200 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 TMEM240Q5SV17 173 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 TMEM199Q8N511 208 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 IL27Q8NEV9 243 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 GLT1D1Q96MS3 346 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 C1QTNF1Q9BXJ1 281 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 CRNKL1Q9BZJ0 848 aaKnown RBP13.15□□□□□ -0.3
RPL4-202ENST00000561554 MYH8P13535 1937 aa13.15□□□□□ -0.3
RPL4-202ENST00000561554 SYNRGQ9UMZ2 1314 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 COL11A1P12107 1806 aaPredicted RBP13.14□□□□□ -0.31
RPL4-202ENST00000561554 MAGEB6P1A0A0J9YX57 407 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 SURF6O75683 361 aaKnown RBP13.14□□□□□ -0.31
RPL4-202ENST00000561554 STAT3P40763 770 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 MAMDC4Q6UXC1 1216 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 CCDC129Q6ZRS4 1044 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 C16orf59Q7L2K0 433 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 SIAH1Q8IUQ4 282 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 PCSK9Q8NBP7 692 aaKnown RBP13.14□□□□□ -0.31
RPL4-202ENST00000561554 CCDC17Q96LX7 622 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
RPL4-202ENST00000561554 MTIF3Q9H2K0 278 aaKnown RBP13.14□□□□□ -0.31
RPL4-202ENST00000561554 PRDM12Q9H4Q4 367 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 MSRAQ9UJ68 235 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
RPL4-202ENST00000561554 TAL1P17542 331 aaPredicted RBP13.13□□□□□ -0.31
RPL4-202ENST00000561554 PBX2P40425 430 aa13.13□□□□□ -0.31
RPL4-202ENST00000561554 ICA1Q05084 483 aa13.13□□□□□ -0.31
RPL4-202ENST00000561554 ADGRE1Q14246 886 aa13.13□□□□□ -0.31
RPL4-202ENST00000561554 TTF1Q15361 905 aaPredicted RBP13.13□□□□□ -0.31
RPL4-202ENST00000561554 KCNA10Q16322 511 aa13.13□□□□□ -0.31
RPL4-202ENST00000561554 ZNF467Q7Z7K2 595 aaPredicted RBP13.13□□□□□ -0.31
RPL4-202ENST00000561554 HERVK_113Q902F9 699 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms