RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 INCENPQ9NQS7 918 aa24.55■■□□□ 1.52
TPM1-232ENST00000561425 A0A0G2JMZ2 1700 aa24.55■■□□□ 1.52
TPM1-232ENST00000561425 HIP1O00291 1037 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 SGPL1O95470 568 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 NDUFB10O96000 172 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 IGHA2P01877 340 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 TSPY3P0CV98 308 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 TSPY8P0CW00 308 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 MAP2K5Q13163 448 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 GRB14Q14449 540 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 FAM47AQ5JRC9 791 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 UBE2Q1Q7Z7E8 422 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 CCAR1Q8IX12 1150 aaKnown RBP24.54■■□□□ 1.52
TPM1-232ENST00000561425 GMCL1P1Q8NEA9 526 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 FBXO28Q9NVF7 368 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 PPP1R9AQ9ULJ8 1098 aa24.54■■□□□ 1.52
TPM1-232ENST00000561425 TNRC18O15417 2968 aaPredicted RBP24.54■■□□□ 1.52
TPM1-232ENST00000561425 RGS2P41220 211 aa24.53■■□□□ 1.52
TPM1-232ENST00000561425 MFAP1P55081 439 aaKnown RBP24.53■■□□□ 1.52
TPM1-232ENST00000561425 FAM83BQ5T0W9 1011 aa24.53■■□□□ 1.52
TPM1-232ENST00000561425 REPS2Q8NFH8 660 aa24.53■■□□□ 1.52
TPM1-232ENST00000561425 IL17RBQ9NRM6 502 aa24.53■■□□□ 1.52
TPM1-232ENST00000561425 VWA5AO00534 786 aa24.52■■□□□ 1.52
TPM1-232ENST00000561425 STRNO43815 780 aa24.52■■□□□ 1.52
TPM1-232ENST00000561425 GSPT1P15170 499 aaKnown RBP24.52■■□□□ 1.52
TPM1-232ENST00000561425 TRIM32Q13049 653 aa24.52■■□□□ 1.52
TPM1-232ENST00000561425 TMEM132BQ14DG7 1078 aa24.52■■□□□ 1.52
TPM1-232ENST00000561425 TTC22Q5TAA0 569 aa24.52■■□□□ 1.52
TPM1-232ENST00000561425 U2AF1L4Q8WU68 220 aaKnown RBP24.52■■□□□ 1.52
TPM1-232ENST00000561425 APBA2Q99767 749 aa24.52■■□□□ 1.52
TPM1-232ENST00000561425 CRISPLD2Q9H0B8 497 aa24.52■■□□□ 1.52
TPM1-232ENST00000561425 RPTORQ8N122 1335 aa24.52■■□□□ 1.52
TPM1-232ENST00000561425 PPP4R3BQ5MIZ7 849 aa24.51■■□□□ 1.51
TPM1-232ENST00000561425 MROH8Q9H579 483 aa24.51■■□□□ 1.51
TPM1-232ENST00000561425 PARP14Q460N5 1801 aa24.5■■□□□ 1.51
TPM1-232ENST00000561425 CENPBP07199 599 aaPredicted RBP24.5■■□□□ 1.51
TPM1-232ENST00000561425 ERCC3P19447 782 aa24.5■■□□□ 1.51
TPM1-232ENST00000561425 CWC27Q6UX04 472 aaKnown RBP24.5■■□□□ 1.51
TPM1-232ENST00000561425 ABRAQ8N0Z2 381 aa24.5■■□□□ 1.51
TPM1-232ENST00000561425 NUP88Q99567 741 aaPredicted RBP24.5■■□□□ 1.51
TPM1-232ENST00000561425 NBPF3Q9H094 633 aa24.5■■□□□ 1.51
TPM1-232ENST00000561425 ZNF214Q9UL59 606 aaPredicted RBP24.5■■□□□ 1.51
TPM1-232ENST00000561425 PCP11498 1178 aaKnown RBP24.49■■□□□ 1.51
TPM1-232ENST00000561425 CCL14Q16627 93 aa24.49■■□□□ 1.51
TPM1-232ENST00000561425 RIOX2Q8IUF8 465 aa24.49■■□□□ 1.51
TPM1-232ENST00000561425 PRPF38AQ8NAV1 312 aaKnown RBP24.49■■□□□ 1.51
TPM1-232ENST00000561425 SLF1Q9BQI6 1058 aa24.49■■□□□ 1.51
TPM1-232ENST00000561425 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.49■■□□□ 1.51
TPM1-232ENST00000561425 DIAPH3Q9NSV4 1193 aa24.49■■□□□ 1.51
TPM1-232ENST00000561425 TCP11L1Q9NUJ3 509 aa24.49■■□□□ 1.51
TPM1-232ENST00000561425 TSPY2A6NKD2 308 aa24.48■■□□□ 1.51
TPM1-232ENST00000561425 SLC25A27O95847 323 aa24.48■■□□□ 1.51
TPM1-232ENST00000561425 DEFB118Q96PH6 123 aa24.48■■□□□ 1.51
TPM1-232ENST00000561425 HMX1Q9NP08 348 aaPredicted RBP24.48■■□□□ 1.51
TPM1-232ENST00000561425 IVNS1ABPQ9Y6Y0 642 aa24.48■■□□□ 1.51
TPM1-232ENST00000561425 MKI67P46013 3256 aaKnown RBP24.48■■□□□ 1.51
TPM1-232ENST00000561425 ATP2A1O14983 1001 aa24.47■■□□□ 1.51
TPM1-232ENST00000561425 ZKSCAN1P17029 563 aaPredicted RBP24.47■■□□□ 1.51
TPM1-232ENST00000561425 CACNB2Q08289 660 aaPredicted RBP24.47■■□□□ 1.51
TPM1-232ENST00000561425 SLFN13Q68D06 897 aa24.47■■□□□ 1.51
TPM1-232ENST00000561425 LRRC47Q8N1G4 583 aaKnown RBP24.47■■□□□ 1.51
TPM1-232ENST00000561425 NPLOC4Q8TAT6 608 aa24.47■■□□□ 1.51
TPM1-232ENST00000561425 STAG1Q8WVM7 1258 aa24.47■■□□□ 1.51
TPM1-232ENST00000561425 GMCL1Q96IK5 515 aa24.47■■□□□ 1.51
TPM1-232ENST00000561425 DSCC1Q9BVC3 393 aa24.47■■□□□ 1.51
TPM1-232ENST00000561425 FLRT1Q9NZU1 646 aa24.47■■□□□ 1.51
TPM1-232ENST00000561425 FEM1BQ9UK73 627 aa24.47■■□□□ 1.51
TPM1-232ENST00000561425 RANBP6O60518 1105 aaKnown RBP24.46■■□□□ 1.51
TPM1-232ENST00000561425 NMT2O60551 498 aa24.46■■□□□ 1.51
TPM1-232ENST00000561425 PRKAR2AP13861 404 aaKnown RBP24.46■■□□□ 1.51
TPM1-232ENST00000561425 STAT3P40763 770 aa24.46■■□□□ 1.51
TPM1-232ENST00000561425 AKNAD1Q5T1N1 836 aa24.46■■□□□ 1.51
TPM1-232ENST00000561425 WDR78Q5VTH9 848 aa24.46■■□□□ 1.51
TPM1-232ENST00000561425 IL25Q9H293 177 aa24.46■■□□□ 1.51
TPM1-232ENST00000561425 CWC22Q9HCG8 908 aaKnown RBP24.46■■□□□ 1.51
TPM1-232ENST00000561425 RAD21O60216 631 aa24.45■■□□□ 1.5
TPM1-232ENST00000561425 PLA2G6O60733 806 aa24.45■■□□□ 1.5
TPM1-232ENST00000561425 COBLO75128 1261 aa24.45■■□□□ 1.5
TPM1-232ENST00000561425 ADORA2AP29274 412 aa24.45■■□□□ 1.5
TPM1-232ENST00000561425 NT5C2P49902 561 aa24.45■■□□□ 1.5
TPM1-232ENST00000561425 PLS1Q14651 629 aa24.45■■□□□ 1.5
TPM1-232ENST00000561425 PRPF38BQ5VTL8 546 aaKnown RBP24.45■■□□□ 1.5
TPM1-232ENST00000561425 TBC1D10CQ8IV04 446 aa24.45■■□□□ 1.5
TPM1-232ENST00000561425 ZNF236Q9UL36 1845 aa24.45■■□□□ 1.5
TPM1-232ENST00000561425 BMP3P12645 472 aa24.44■■□□□ 1.5
TPM1-232ENST00000561425 COPB2P35606 906 aa24.44■■□□□ 1.5
TPM1-232ENST00000561425 HAND2P61296 217 aa24.44■■□□□ 1.5
TPM1-232ENST00000561425 OLFML2BQ68BL8 750 aa24.44■■□□□ 1.5
TPM1-232ENST00000561425 NCAPG2Q86XI2 1143 aa24.44■■□□□ 1.5
TPM1-232ENST00000561425 SLC38A10Q9HBR0 1119 aa24.44■■□□□ 1.5
TPM1-232ENST00000561425 MFSD6Q6ZSS7 791 aa24.43■■□□□ 1.5
TPM1-232ENST00000561425 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.43■■□□□ 1.5
TPM1-232ENST00000561425 STX8Q9UNK0 236 aa24.43■■□□□ 1.5
TPM1-232ENST00000561425 PDE4DIPQ5VU43 2346 aa24.43■■□□□ 1.5
TPM1-232ENST00000561425 MYH4Q9Y623 1939 aa24.42■■□□□ 1.5
TPM1-232ENST00000561425 ZNF213O14771 459 aa24.42■■□□□ 1.5
TPM1-232ENST00000561425 TFRCP02786 760 aaKnown RBP24.42■■□□□ 1.5
TPM1-232ENST00000561425 FDX1P10109 184 aa24.42■■□□□ 1.5
TPM1-232ENST00000561425 FCER1AP12319 257 aa24.42■■□□□ 1.5
TPM1-232ENST00000561425 CHMLP26374 656 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms