RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ADORA2AP29274 412 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 TMEM132BQ14DG7 1078 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 HABP4Q5JVS0 413 aaKnown RBP19.04■□□□□ 0.64
LMX1B-204ENST00000561065 SHCBP1Q8NEM2 672 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 REPS2Q8NFH8 660 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 DPF3Q92784 378 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 CEP95Q96GE4 821 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 HTATIP2Q9BUP3 242 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 GOPCQ9HD26 462 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 NYAP2Q9P242 653 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 ADAMTS5Q9UNA0 930 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 TACC3Q9Y6A5 838 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 IVNS1ABPQ9Y6Y0 642 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 TRIOBPQ9H2D6 2365 aa19.04■□□□□ 0.64
LMX1B-204ENST00000561065 A0A0D9SFI3 127 aa19.03■□□□□ 0.64
LMX1B-204ENST00000561065 NDUFB10O96000 172 aa19.03■□□□□ 0.64
LMX1B-204ENST00000561065 PPARAQ07869 468 aa19.03■□□□□ 0.64
LMX1B-204ENST00000561065 PLS1Q14651 629 aa19.03■□□□□ 0.64
LMX1B-204ENST00000561065 EVI5LQ96CN4 794 aa19.03■□□□□ 0.64
LMX1B-204ENST00000561065 NAPBQ9H115 298 aa19.03■□□□□ 0.64
LMX1B-204ENST00000561065 PPP1R9AQ9ULJ8 1098 aa19.03■□□□□ 0.64
LMX1B-204ENST00000561065 COLQQ9Y215 455 aaPredicted RBP19.03■□□□□ 0.64
LMX1B-204ENST00000561065 DNAH12Q6ZR08 3092 aa19.03■□□□□ 0.64
LMX1B-204ENST00000561065 LAMA4Q16363 1823 aa19.03■□□□□ 0.64
LMX1B-204ENST00000561065 RAD21O60216 631 aa19.02■□□□□ 0.64
LMX1B-204ENST00000561065 COBLO75128 1261 aa19.02■□□□□ 0.64
LMX1B-204ENST00000561065 LHX8Q68G74 356 aa19.02■□□□□ 0.64
LMX1B-204ENST00000561065 ANKLE1Q8NAG6 615 aa19.02■□□□□ 0.64
LMX1B-204ENST00000561065 TRPV1Q8NER1 839 aa19.02■□□□□ 0.64
LMX1B-204ENST00000561065 FAM227BQ96M60 508 aa19.02■□□□□ 0.64
LMX1B-204ENST00000561065 ZNF214Q9UL59 606 aaPredicted RBP19.02■□□□□ 0.64
LMX1B-204ENST00000561065 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.02■□□□□ 0.64
LMX1B-204ENST00000561065 PFASO15067 1338 aa19.02■□□□□ 0.64
LMX1B-204ENST00000561065 VWA5AO00534 786 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 CAPN2P17655 700 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 CYP2C19P33261 490 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 FAM47AQ5JRC9 791 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 B4GALNT3Q6L9W6 998 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 NECAB2Q7Z6G3 386 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 NCAPG2Q86XI2 1143 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 TICAM2Q86XR7 235 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 LRRC47Q8N1G4 583 aaKnown RBP19.01■□□□□ 0.63
LMX1B-204ENST00000561065 NACAP1Q9BZK3 213 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 MTMR4Q9NYA4 1195 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 SZT2Q5T011 3432 aa19.01■□□□□ 0.63
LMX1B-204ENST00000561065 F5H6K3 240 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 KLRC3Q07444 240 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 ZNF589Q86UQ0 364 aaPredicted RBP19■□□□□ 0.63
LMX1B-204ENST00000561065 INCENPQ9NQS7 918 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 CLIP2Q9UDT6 1046 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 LAMA3Q16787 3333 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 CYBAP13498 195 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 CTDSPL2Q05D32 466 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 MFSD14CQ5VZR4 134 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 CHRDL2Q6WN34 429 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 RIOX2Q8IUF8 465 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 ZNF444Q8N0Y2 327 aaPredicted RBP19■□□□□ 0.63
LMX1B-204ENST00000561065 NEDD1Q8NHV4 660 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 MROH8Q9H579 483 aa19■□□□□ 0.63
LMX1B-204ENST00000561065 STRNO43815 780 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 NUCB1Q02818 461 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 NMIQ13287 307 aaPredicted RBP18.99■□□□□ 0.63
LMX1B-204ENST00000561065 OLFML2BQ68BL8 750 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 RASGRP2Q7LDG7 609 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 CHD1LQ86WJ1 897 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 PLEKHM2Q8IWE5 1019 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 ABRAQ8N0Z2 381 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 MKL1Q969V6 931 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 SLF1Q9BQI6 1058 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 NBPF3Q9H094 633 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 PRO3102Q9H379 93 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 ZNF287Q9HBT7 754 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 HELLSQ9NRZ9 838 aa18.99■□□□□ 0.63
LMX1B-204ENST00000561065 TTLL1O95922 423 aa18.98■□□□□ 0.63
LMX1B-204ENST00000561065 TSPY3P0CV98 308 aa18.98■□□□□ 0.63
LMX1B-204ENST00000561065 TSPY8P0CW00 308 aa18.98■□□□□ 0.63
LMX1B-204ENST00000561065 COL6A1P12109 1028 aa18.98■□□□□ 0.63
LMX1B-204ENST00000561065 TFAP4Q01664 338 aa18.98■□□□□ 0.63
LMX1B-204ENST00000561065 PDE4BQ07343 736 aa18.98■□□□□ 0.63
LMX1B-204ENST00000561065 DPP9Q86TI2 863 aa18.98■□□□□ 0.63
LMX1B-204ENST00000561065 C11orf49Q9H6J7 331 aa18.98■□□□□ 0.63
LMX1B-204ENST00000561065 PCDH10Q9P2E7 1040 aa18.98■□□□□ 0.63
LMX1B-204ENST00000561065 EVI5O60447 810 aa18.97■□□□□ 0.63
LMX1B-204ENST00000561065 NMT2O60551 498 aa18.97■□□□□ 0.63
LMX1B-204ENST00000561065 SLC25A27O95847 323 aa18.97■□□□□ 0.63
LMX1B-204ENST00000561065 FXR1P51114 621 aaKnown RBP eCLIP18.97■□□□□ 0.63
LMX1B-204ENST00000561065 GMCL1P1Q8NEA9 526 aa18.97■□□□□ 0.63
LMX1B-204ENST00000561065 MAML3Q96JK9 1138 aa18.97■□□□□ 0.63
LMX1B-204ENST00000561065 DDX20Q9UHI6 824 aaKnown RBP18.97■□□□□ 0.63
LMX1B-204ENST00000561065 ANAPC4Q9UJX5 808 aa18.97■□□□□ 0.63
LMX1B-204ENST00000561065 SYNPO2Q9UMS6 1093 aa18.97■□□□□ 0.63
LMX1B-204ENST00000561065 MCM3APO60318 1980 aa18.96■□□□□ 0.63
LMX1B-204ENST00000561065 PGK2P07205 417 aa18.96■□□□□ 0.63
LMX1B-204ENST00000561065 FCER1AP12319 257 aa18.96■□□□□ 0.63
LMX1B-204ENST00000561065 STAT3P40763 770 aa18.96■□□□□ 0.63
LMX1B-204ENST00000561065 MMP19Q99542 508 aa18.96■□□□□ 0.63
LMX1B-204ENST00000561065 OSBPL3Q9H4L5 887 aa18.96■□□□□ 0.63
LMX1B-204ENST00000561065 IL17RBQ9NRM6 502 aa18.96■□□□□ 0.63
LMX1B-204ENST00000561065 RBM27Q9P2N5 1060 aaKnown RBP18.96■□□□□ 0.63
LMX1B-204ENST00000561065 RIPK3Q9Y572 518 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms