RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 USP37Q86T82 979 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 NSUN4Q96CB9 384 aaKnown RBP10.96□□□□□ -0.65
TRPM1-212ENST00000560801 ZDHHC15Q96MV8 337 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 TEX13BQ9BXU2 312 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 F5H6K3 240 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 SMC2O95347 1197 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 CYP2D6P10635 497 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 CCND2P30279 289 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 KLRC3Q07444 240 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 HSP90AA2PQ14568 343 aaPredicted RBP10.96□□□□□ -0.65
TRPM1-212ENST00000560801 NONOQ15233 471 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRPM1-212ENST00000560801 SLC44A5Q8NCS7 719 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 TSG101Q99816 390 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 DCP1AQ9NPI6 582 aaPredicted RBP10.96□□□□□ -0.65
TRPM1-212ENST00000560801 GINM1Q9NU53 330 aa10.96□□□□□ -0.65
TRPM1-212ENST00000560801 KIF4AO95239 1232 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 DEXIO95424 95 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 EIF2AK2P19525 551 aaKnown RBP10.96□□□□□ -0.66
TRPM1-212ENST00000560801 CETN1Q12798 172 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 TTLL4Q14679 1199 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 DACT2Q5SW24 774 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 MIER3Q7Z3K6 550 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 FAM83AQ86UY5 434 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 TRERF1Q96PN7 1200 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 XRN1Q8IZH2 1706 aaKnown RBP10.96□□□□□ -0.66
TRPM1-212ENST00000560801 ARHGEF35A5YM69 484 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 CCDC169A6NNP5 214 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 SLC25A27O95847 323 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 MAPK4P31152 587 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 ZMYM1Q5SVZ6 1142 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 OTUD6AQ7L8S5 288 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 KRT25Q7Z3Z0 450 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 PLEKHH3Q7Z736 793 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 NECAB1Q8N987 351 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 UIMC1Q96RL1 719 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 RTEL1Q9NZ71 1219 aa10.96□□□□□ -0.66
TRPM1-212ENST00000560801 hCG_1642624A0A1W2PR95 340 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 MTX1Q13505 466 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 STXBP2Q15833 593 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 TXNRD3Q86VQ6 643 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 C7orf31Q8N865 590 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 PUS7LQ9H0K6 701 aaKnown RBP10.95□□□□□ -0.66
TRPM1-212ENST00000560801 K7ELQ4 463 aaPredicted RBP10.95□□□□□ -0.66
TRPM1-212ENST00000560801 WDR46O15213 610 aaKnown RBP10.95□□□□□ -0.66
TRPM1-212ENST00000560801 ZSCAN20P17040 1043 aaPredicted RBP10.95□□□□□ -0.66
TRPM1-212ENST00000560801 MCM7P33993 719 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 SMTNP53814 917 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 GIMAP6Q6P9H5 292 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 PPP2R3CQ969Q6 453 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 DCDC2CA8MYV0 355 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 POTEJP0CG39 1038 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 HSPA6P17066 643 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 SPDYE2Q495Y8 402 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 NCAPH2Q6IBW4 605 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 ELMSAN1Q6PJG2 1045 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 PLA2G4DQ86XP0 818 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRPM1-212ENST00000560801 FERMT2Q96AC1 680 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 NAT10Q9H0A0 1025 aaKnown RBP10.95□□□□□ -0.66
TRPM1-212ENST00000560801 CHMP5Q9NZZ3 219 aa10.95□□□□□ -0.66
TRPM1-212ENST00000560801 NFKBIEO00221 500 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 NEBLO76041 1014 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 TBC1D8O95759 1140 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 C1QTNF8P60827 252 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 HAUS3Q68CZ6 603 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 CDAN1Q8IWY9 1227 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 KCNQ5Q9NR82 932 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 A0A0D9SFI3 127 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 ODR4Q5SWX8 454 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 DCAF4Q8WV16 495 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 PANK2Q9BZ23 570 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 ZBTB24O43167 697 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-212ENST00000560801 ATN1P54259 1190 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-212ENST00000560801 FILIP1LQ4L180 1135 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 HMX1Q9NP08 348 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-212ENST00000560801 NALCNQ8IZF0 1738 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 RNASELQ05823 741 aaKnown RBP10.94□□□□□ -0.66
TRPM1-212ENST00000560801 STRN3Q13033 797 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 PDILTQ8N807 584 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 NSUN6Q8TEA1 469 aaKnown RBP10.94□□□□□ -0.66
TRPM1-212ENST00000560801 NUP88Q99567 741 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-212ENST00000560801 DACH1Q9UI36 760 aa10.94□□□□□ -0.66
TRPM1-212ENST00000560801 FLT1P17948 1338 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 E7EWF7 191 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 SLC27A2O14975 620 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 NFX1Q12986 1120 aaKnown RBP10.93□□□□□ -0.66
TRPM1-212ENST00000560801 CDC37Q16543 378 aaPredicted RBP10.93□□□□□ -0.66
TRPM1-212ENST00000560801 TCERG1LQ5VWI1 586 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 LRSAM1Q6UWE0 723 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 NKX2-3Q8TAU0 364 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 OSBP2Q969R2 916 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 RMDN3Q96TC7 470 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 IMPG2Q9BZV3 1241 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 RPAP1Q9BWH6 1393 aaPredicted RBP10.93□□□□□ -0.66
TRPM1-212ENST00000560801 DDX11L8A8MPP1 907 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 DYNC1LI2O43237 492 aaPredicted RBP10.93□□□□□ -0.66
TRPM1-212ENST00000560801 PPATQ06203 517 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 PRR16Q569H4 304 aa10.93□□□□□ -0.66
TRPM1-212ENST00000560801 GNASQ5JWF2 1037 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms