RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PGK2P07205 417 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
TPM1-225ENST00000560679 ZNF865P0CJ78 1059 aaPredicted RBP12.08□□□□□ -0.48
TPM1-225ENST00000560679 RARSP54136 660 aaKnown RBP12.08□□□□□ -0.48
TPM1-225ENST00000560679 POLA2Q14181 598 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 PLS1Q14651 629 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 TMEM132BQ14DG7 1078 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 TMEM240Q5SV17 173 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 TTC6Q86TZ1 520 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 CERS3Q8IU89 383 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 MAGEB6Q8N7X4 407 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 TOX2Q96NM4 488 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 GAS2L1Q99501 681 aaPredicted RBP12.08□□□□□ -0.48
TPM1-225ENST00000560679 RIOK1Q9BRS2 568 aaKnown RBP12.08□□□□□ -0.48
TPM1-225ENST00000560679 ANTXR1Q9H6X2 564 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 SLC5A4Q9NY91 659 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 SYNRGQ9UMZ2 1314 aa12.08□□□□□ -0.48
TPM1-225ENST00000560679 MYH8P13535 1937 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 MYADML2A6NDP7 307 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 FLOT1O75955 427 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 TIMP1P01033 207 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 FCER1AP12319 257 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
TPM1-225ENST00000560679 ACLYP53396 1101 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
TPM1-225ENST00000560679 MAP3K12Q12852 859 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 ZNF792Q3KQV3 632 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 CCSAPQ6IQ19 270 aaPredicted RBP12.07□□□□□ -0.48
TPM1-225ENST00000560679 SIAH1Q8IUQ4 282 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 SPICE1Q8N0Z3 855 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 SLC44A5Q8NCS7 719 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 ARHGAP45Q92619 1136 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 TINF2Q9BSI4 451 aa12.07□□□□□ -0.48
TPM1-225ENST00000560679 MYO9BQ13459 2157 aa12.06□□□□□ -0.48
TPM1-225ENST00000560679 MPHOSPH10O00566 681 aaKnown RBP12.06□□□□□ -0.48
TPM1-225ENST00000560679 TRIM27P14373 513 aa12.06□□□□□ -0.48
TPM1-225ENST00000560679 AKR1A1P14550 325 aa12.06□□□□□ -0.48
TPM1-225ENST00000560679 MRPS5P82675 430 aaKnown RBP12.06□□□□□ -0.48
TPM1-225ENST00000560679 MFSD5Q6N075 450 aa12.06□□□□□ -0.48
TPM1-225ENST00000560679 KLHDC9Q8NEP7 349 aa12.06□□□□□ -0.48
TPM1-225ENST00000560679 FAM122AQ96E09 287 aa12.06□□□□□ -0.48
TPM1-225ENST00000560679 NECAB3Q96P71 396 aaPredicted RBP12.06□□□□□ -0.48
TPM1-225ENST00000560679 MMP19Q99542 508 aa12.06□□□□□ -0.48
TPM1-225ENST00000560679 STARD7Q9NQZ5 370 aa12.06□□□□□ -0.48
TPM1-225ENST00000560679 FBXO28Q9NVF7 368 aa12.06□□□□□ -0.48
TPM1-225ENST00000560679 DCDC2CA8MYV0 355 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 ADCY6O43306 1168 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 CYP2D6P10635 497 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 CSF2RAP15509 400 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 CCDC85BQ15834 202 aaPredicted RBP12.05□□□□□ -0.48
TPM1-225ENST00000560679 CCDC129Q6ZRS4 1044 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 REPS2Q8NFH8 660 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 SSH3Q8TE77 659 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 EAF2Q96CJ1 260 aaPredicted RBP12.05□□□□□ -0.48
TPM1-225ENST00000560679 TSEN34Q9BSV6 310 aaKnown RBP12.05□□□□□ -0.48
TPM1-225ENST00000560679 CCDC8Q9H0W5 538 aaPredicted RBP12.05□□□□□ -0.48
TPM1-225ENST00000560679 VCPKMTQ9H867 229 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 ADAMTS5Q9UNA0 930 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 GTF3C3Q9Y5Q9 886 aa12.05□□□□□ -0.48
TPM1-225ENST00000560679 TCF20Q9UGU0 1960 aaKnown RBP12.05□□□□□ -0.48
TPM1-225ENST00000560679 MOXD2PA6NHM9 499 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 SMIM22K7EJ46 135 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 SLC25A27O95847 323 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 POLR3DP05423 398 aaPredicted RBP12.04□□□□□ -0.48
TPM1-225ENST00000560679 ACRP10323 421 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 AKR1B1P15121 316 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 CDK7P50613 346 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 PPIGQ13427 754 aaKnown RBP eCLIP12.04□□□□□ -0.481e-17■□□□□ 11.3
TPM1-225ENST00000560679 KCNA10Q16322 511 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 SAMD1Q6SPF0 538 aaPredicted RBP12.04□□□□□ -0.48
TPM1-225ENST00000560679 TMEM179Q6ZVK1 233 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 RIOX2Q8IUF8 465 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 MCM9Q9NXL9 1143 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 CXXC1Q9P0U4 656 aaPredicted RBP12.04□□□□□ -0.48
TPM1-225ENST00000560679 ZNF214Q9UL59 606 aaPredicted RBP12.04□□□□□ -0.48
TPM1-225ENST00000560679 DIS3Q9Y2L1 958 aaKnown RBP12.04□□□□□ -0.48
TPM1-225ENST00000560679 YBX2Q9Y2T7 364 aaKnown RBP12.04□□□□□ -0.48
TPM1-225ENST00000560679 TMX2Q9Y320 296 aa12.04□□□□□ -0.48
TPM1-225ENST00000560679 WDR46O15213 610 aaKnown RBP12.03□□□□□ -0.48
TPM1-225ENST00000560679 CST5P28325 142 aaPredicted RBP12.03□□□□□ -0.48
TPM1-225ENST00000560679 ICA1Q05084 483 aa12.03□□□□□ -0.48
TPM1-225ENST00000560679 OS9Q13438 667 aaPredicted RBP12.03□□□□□ -0.48
TPM1-225ENST00000560679 PSRC1Q6PGN9 363 aaPredicted RBP12.03□□□□□ -0.48
TPM1-225ENST00000560679 ZNF365Q70YC5 407 aa12.03□□□□□ -0.48
TPM1-225ENST00000560679 NUP133Q8WUM0 1156 aa12.03□□□□□ -0.48
TPM1-225ENST00000560679 SDR42E1Q8WUS8 393 aa12.03□□□□□ -0.48
TPM1-225ENST00000560679 NKX2-4Q9H2Z4 354 aa12.03□□□□□ -0.48
TPM1-225ENST00000560679 GREB1LQ9C091 1923 aaPredicted RBP12.03□□□□□ -0.48
TPM1-225ENST00000560679 BAZ2AQ9UIF9 1905 aaKnown RBP12.03□□□□□ -0.48
TPM1-225ENST00000560679 MCM3APO60318 1980 aa12.03□□□□□ -0.48
TPM1-225ENST00000560679 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.49
TPM1-225ENST00000560679 BCAR3O75815 825 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 SNAI1O95863 264 aaPredicted RBP12.02□□□□□ -0.49
TPM1-225ENST00000560679 IGFBP4P22692 258 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 TFF2Q03403 129 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 KCTD2Q14681 263 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 FAM126BQ8IXS8 530 aa12.02□□□□□ -0.49
TPM1-225ENST00000560679 DYNLL2Q96FJ2 89 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms