RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CTDP1Q9Y5B0 961 aaPredicted RBP15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 ZMYM6O95789 1325 aa15.35■□□□□ 0.05
CTDSPL2-209ENST00000560620 NMT2O60551 498 aa15.34■□□□□ 0.05
CTDSPL2-209ENST00000560620 NDUFB10O96000 172 aa15.34■□□□□ 0.05
CTDSPL2-209ENST00000560620 INHAP05111 366 aa15.34■□□□□ 0.05
CTDSPL2-209ENST00000560620 CCL5P13501 91 aa15.34■□□□□ 0.05
CTDSPL2-209ENST00000560620 EN2P19622 333 aaPredicted RBP15.34■□□□□ 0.05
CTDSPL2-209ENST00000560620 IKQ13123 557 aaPredicted RBP15.34■□□□□ 0.05
CTDSPL2-209ENST00000560620 SPATC1LQ9H0A9 340 aa15.34■□□□□ 0.05
CTDSPL2-209ENST00000560620 RNF41Q9H4P4 317 aaPredicted RBP15.34■□□□□ 0.05
CTDSPL2-209ENST00000560620 PLIN4Q96Q06 1357 aa15.34■□□□□ 0.05
CTDSPL2-209ENST00000560620 ORC4O43929 436 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 RGS2P41220 211 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 SLC4A3P48751 1232 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 IMMTQ16891 758 aaKnown RBP15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 AKNAD1Q5T1N1 836 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 SLFN13Q68D06 897 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 NCAPG2Q86XI2 1143 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 MKL1Q969V6 931 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 SLF1Q9BQI6 1058 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 DSCC1Q9BVC3 393 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 MOV10L1Q9BXT6 1211 aaKnown RBP15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 CTNNA3Q9UI47 895 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 GJD2Q9UKL4 321 aa15.33■□□□□ 0.04
CTDSPL2-209ENST00000560620 HMGCRP04035 888 aa15.32■□□□□ 0.04
CTDSPL2-209ENST00000560620 SLC1A4P43007 532 aa15.32■□□□□ 0.04
CTDSPL2-209ENST00000560620 GMCL1P1Q8NEA9 526 aa15.32■□□□□ 0.04
CTDSPL2-209ENST00000560620 STAG1Q8WVM7 1258 aa15.32■□□□□ 0.04
CTDSPL2-209ENST00000560620 KIFC2Q96AC6 838 aa15.32■□□□□ 0.04
CTDSPL2-209ENST00000560620 UNC93B1Q9H1C4 597 aa15.32■□□□□ 0.04
CTDSPL2-209ENST00000560620 PPP1R9AQ9ULJ8 1098 aa15.32■□□□□ 0.04
CTDSPL2-209ENST00000560620 SYNPO2Q9UMS6 1093 aa15.32■□□□□ 0.04
CTDSPL2-209ENST00000560620 TACC3Q9Y6A5 838 aa15.32■□□□□ 0.04
CTDSPL2-209ENST00000560620 SLC15A5A6NIM6 579 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 VWA5AO00534 786 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 PCP11498 1178 aaKnown RBP15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 BMP3P12645 472 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 ZKSCAN1P17029 563 aaPredicted RBP15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 ERCC3P19447 782 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 MCCP23508 829 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 CHMLP26374 656 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 MAP2K5Q13163 448 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 TMEM132BQ14DG7 1078 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 DPP9Q86TI2 863 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 TBC1D10CQ8IV04 446 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 PRPF38AQ8NAV1 312 aaKnown RBP15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 NKX2-3Q8TAU0 364 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 ESR2Q92731 530 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 APBA2Q99767 749 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 IL17RBQ9NRM6 502 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 FEM1BQ9UK73 627 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 RAD50Q92878 1312 aa15.31■□□□□ 0.04
CTDSPL2-209ENST00000560620 ZBED4O75132 1171 aa15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 FGRP09769 529 aa15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 COL11A1P12107 1806 aaPredicted RBP15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 XRCC5P13010 732 aaKnown RBP15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 PTPREP23469 700 aa15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 RLFQ13129 1914 aa15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 MORN1Q5T089 497 aa15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 TRMT44Q8IYL2 757 aaKnown RBP15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 TRIB2Q92519 343 aa15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 NBPF3Q9H094 633 aa15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 IL25Q9H293 177 aa15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 MROH8Q9H579 483 aa15.3■□□□□ 0.04
CTDSPL2-209ENST00000560620 KIAA0100Q14667 2235 aaKnown RBP15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 PLXNB2O15031 1838 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 PARP14Q460N5 1801 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 RBBP6Q7Z6E9 1792 aaKnown RBP15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 A0A0G2JMZ2 1700 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 NEDD4P46934 1319 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 TMEM232C9JQI7 657 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 STRNO43815 780 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 SLC25A27O95847 323 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 CENPBP07199 599 aaPredicted RBP15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 GJB1P08034 283 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 FCER1AP12319 257 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 STAT3P40763 770 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 STAT2P52630 851 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 CCL14Q16627 93 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 CCDC96Q2M329 555 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 SKAP1Q86WV1 359 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 IQCA1Q86XH1 822 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 CPXCR1Q8N123 301 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 SHCBP1Q8NEM2 672 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 ZKSCAN3Q9BRR0 538 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 HMX1Q9NP08 348 aaPredicted RBP15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 BRCA2P51587 3418 aa15.29■□□□□ 0.04
CTDSPL2-209ENST00000560620 KDM4AO75164 1064 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 TFRCP02786 760 aaKnown RBP15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 ADORA2AP29274 412 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 TRIM32Q13049 653 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 GRB14Q14449 540 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 SNRNP48Q6IEG0 339 aaKnown RBP15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 KCTD1Q719H9 257 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 CHURC1Q8WUH1 139 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 USP6NLQ92738 828 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 GMCL1Q96IK5 515 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 DEFB118Q96PH6 123 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 SLC5A4Q9NY91 659 aa15.28■□□□□ 0.04
CTDSPL2-209ENST00000560620 ADAMTS5Q9UNA0 930 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms