RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 BMP3P12645 472 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 HOXD10P28358 340 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 DSG3P32926 999 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 ANP32AP39687 249 aaKnown RBP16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 SLFN13Q68D06 897 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 FAM160B2Q86V87 743 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 LRRC47Q8N1G4 583 aaKnown RBP16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 ANKRD13CQ8N6S4 541 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 TMEM47Q9BQJ4 181 aa16.42■□□□□ 0.22
PKNOX1-209ENST00000560448 CASP8AP2Q9UKL3 1982 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 MCCP23508 829 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 MCM5P33992 734 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 HSPA4P34932 840 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 COPB2P35606 906 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 STAT2P52630 851 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 FCGRTP55899 365 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 TMTC2Q8N394 836 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 CHURC1Q8WUH1 139 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 KCNB2Q92953 911 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 TMEM87BQ96K49 555 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 KAT14Q9H8E8 782 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 PPP1R9AQ9ULJ8 1098 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 ADAMTS5Q9UNA0 930 aa16.41■□□□□ 0.22
PKNOX1-209ENST00000560448 A0A0G2JMZ2 1700 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 RAD21O60216 631 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 SEC24BO95487 1268 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 MAPK4P31152 587 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 KIAA1755Q5JYT7 1200 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 FAM83BQ5T0W9 1011 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 GPATCH4Q5T3I0 446 aaKnown RBP16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 IFIT1BQ5T764 474 aaKnown RBP16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 MB21D2Q8IYB1 491 aaPredicted RBP16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 ENAHQ8N8S7 591 aaPredicted RBP16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 PNMA2Q9UL42 364 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 PARP14Q460N5 1801 aa16.4■□□□□ 0.22
PKNOX1-209ENST00000560448 SNHG28P0DPA3 235 aa16.39■□□□□ 0.21
PKNOX1-209ENST00000560448 OAZ1P54368 228 aa16.39■□□□□ 0.21
PKNOX1-209ENST00000560448 ERVK-9P63128 1117 aa16.39■□□□□ 0.21
PKNOX1-209ENST00000560448 ERVK-24P63145 666 aa16.39■□□□□ 0.21
PKNOX1-209ENST00000560448 STOX1Q6ZVD7 989 aa16.39■□□□□ 0.21
PKNOX1-209ENST00000560448 RBPJLQ9UBG7 517 aa16.39■□□□□ 0.21
PKNOX1-209ENST00000560448 RLFQ13129 1914 aa16.39■□□□□ 0.21
PKNOX1-209ENST00000560448 IFIT3O14879 490 aaKnown RBP16.38■□□□□ 0.21
PKNOX1-209ENST00000560448 PDHBP11177 359 aa16.38■□□□□ 0.21
PKNOX1-209ENST00000560448 SEC23AQ15436 765 aa16.38■□□□□ 0.21
PKNOX1-209ENST00000560448 PNMA1Q8ND90 353 aa16.38■□□□□ 0.21
PKNOX1-209ENST00000560448 SHCBP1Q8NEM2 672 aa16.38■□□□□ 0.21
PKNOX1-209ENST00000560448 CD99L2Q8TCZ2 262 aa16.38■□□□□ 0.21
PKNOX1-209ENST00000560448 IPO9Q96P70 1041 aaKnown RBP16.38■□□□□ 0.21
PKNOX1-209ENST00000560448 NEK1Q96PY6 1258 aa16.38■□□□□ 0.21
PKNOX1-209ENST00000560448 VWA5AO00534 786 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 ATP2A1O14983 1001 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 PSMA5P28066 241 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 LIFRP42702 1097 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 PSMC4P43686 418 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 WTAPQ15007 396 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 OTOP1Q7RTM1 612 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 CCAR1Q8IX12 1150 aaKnown RBP16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 TNS4Q8IZW8 715 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 COA7Q96BR5 231 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 USP26Q9BXU7 913 aa16.37■□□□□ 0.21
PKNOX1-209ENST00000560448 TNPO2O14787 897 aaKnown RBP16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 FMNL1O95466 1100 aaPredicted RBP16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 SLC25A27O95847 323 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 ASPRV1Q53RT3 343 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 FBXO46Q6PJ61 603 aaPredicted RBP16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 BTNL9Q6UXG8 535 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 CYB5R4Q7L1T6 521 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 SOCS4Q8WXH5 440 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 MAP3K14Q99558 947 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 TXNRD2Q9NNW7 524 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 TRIM17Q9Y577 477 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 MGAMO43451 1857 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 TMEM232C9JQI7 657 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 PRC1O43663 620 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 ZBED4O75132 1171 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 ANAPC15P60006 121 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 ZNF543Q08ER8 600 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 CCDC96Q2M329 555 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 TMEM67Q5HYA8 995 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 DHX32Q7L7V1 743 aaKnown RBP16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 PAGR1Q9BTK6 254 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 SPATC1LQ9H0A9 340 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 MROH8Q9H579 483 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 SLC38A10Q9HBR0 1119 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 CTDP1Q9Y5B0 961 aaPredicted RBP16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 TAF6LQ9Y6J9 622 aa16.36■□□□□ 0.21
PKNOX1-209ENST00000560448 STRNO43815 780 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 CALM1P0DP23 149 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 CALM2P0DP24 149 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 CALM3P0DP25 149 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 IKQ13123 557 aaPredicted RBP16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 IRF5Q13568 498 aa16.35■□□□□ 0.21
PKNOX1-209ENST00000560448 CATIPQ7Z7H3 387 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms