RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 GREB1LQ9C091 1923 aaPredicted RBP18.07■□□□□ 0.48
SNRPA1-210ENST00000560383 TRIOBPQ9H2D6 2365 aa18.06■□□□□ 0.48
SNRPA1-210ENST00000560383 SZT2Q5T011 3432 aa18.06■□□□□ 0.48
SNRPA1-210ENST00000560383 ZMYM6O95789 1325 aa18.06■□□□□ 0.48
SNRPA1-210ENST00000560383 SLC3A2P08195 630 aaKnown RBP18.06■□□□□ 0.48
SNRPA1-210ENST00000560383 ZNF589Q86UQ0 364 aaPredicted RBP18.06■□□□□ 0.48
SNRPA1-210ENST00000560383 PAWRQ96IZ0 340 aaKnown RBP18.06■□□□□ 0.48
SNRPA1-210ENST00000560383 NYAP2Q9P242 653 aa18.06■□□□□ 0.48
SNRPA1-210ENST00000560383 DNAH12Q6ZR08 3092 aa18.06■□□□□ 0.48
SNRPA1-210ENST00000560383 PLIN4Q96Q06 1357 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 CCDC171Q6TFL3 1326 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 SLC15A5A6NIM6 579 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 EVI5O60447 810 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 HOXC6P09630 235 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 PDE4BQ07343 736 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 GRB14Q14449 540 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 COG2Q14746 738 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 CHRDL2Q6WN34 429 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 ZNF444Q8N0Y2 327 aaPredicted RBP18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 MB21D1Q8N884 522 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 PRO3102Q9H379 93 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 HOXC10Q9NYD6 342 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 BTBD7Q9P203 1132 aa18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNRPA1-210ENST00000560383 HIP1O00291 1037 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 WDR46O15213 610 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 PRDM1O75626 825 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 FGAP02671 866 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 FGRP09769 529 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 HSPD1P10809 573 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 PTPREP23469 700 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 CACNB2Q08289 660 aaPredicted RBP18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 TTC22Q5TAA0 569 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 STK11IPQ8N1F8 1099 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 NEDD1Q8NHV4 660 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 DIS3LQ8TF46 1054 aaKnown RBP18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 TANGO6Q9C0B7 1094 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 NBPF3Q9H094 633 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 SYNPO2Q9UMS6 1093 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 IVNS1ABPQ9Y6Y0 642 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 LAMA3Q16787 3333 aa18.04■□□□□ 0.48
SNRPA1-210ENST00000560383 GSPT1P15170 499 aaKnown RBP18.03■□□□□ 0.48
SNRPA1-210ENST00000560383 MNX1P50219 401 aaPredicted RBP18.03■□□□□ 0.48
SNRPA1-210ENST00000560383 MFAP1P55081 439 aaKnown RBP18.03■□□□□ 0.48
SNRPA1-210ENST00000560383 CCL14Q16627 93 aa18.03■□□□□ 0.48
SNRPA1-210ENST00000560383 SHCBP1Q8NEM2 672 aa18.03■□□□□ 0.48
SNRPA1-210ENST00000560383 MKL1Q969V6 931 aa18.03■□□□□ 0.48
SNRPA1-210ENST00000560383 A0A1W2PPC1 479 aa18.02■□□□□ 0.48
SNRPA1-210ENST00000560383 SPICE1Q8N0Z3 855 aa18.02■□□□□ 0.48
SNRPA1-210ENST00000560383 GOPCQ9HD26 462 aa18.02■□□□□ 0.48
SNRPA1-210ENST00000560383 MTMR4Q9NYA4 1195 aa18.02■□□□□ 0.48
SNRPA1-210ENST00000560383 RBM27Q9P2N5 1060 aaKnown RBP18.02■□□□□ 0.48
SNRPA1-210ENST00000560383 STRNO43815 780 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 ORC4O43929 436 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 DSG3P32926 999 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 ATP2B2Q01814 1243 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 CTDSPL2Q05D32 466 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 WDR78Q5VTH9 848 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 MFSD14CQ5VZR4 134 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 CWC27Q6UX04 472 aaKnown RBP18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 CEP95Q96GE4 821 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 SPATC1LQ9H0A9 340 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 C11orf49Q9H6J7 331 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 DIAPH3Q9NSV4 1193 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 ADAMTS5Q9UNA0 930 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 TACC3Q9Y6A5 838 aa18.01■□□□□ 0.47
SNRPA1-210ENST00000560383 COL11A1P12107 1806 aaPredicted RBP18■□□□□ 0.47
SNRPA1-210ENST00000560383 IGHA2P01877 340 aa18■□□□□ 0.47
SNRPA1-210ENST00000560383 TSPY3P0CV98 308 aa18■□□□□ 0.47
SNRPA1-210ENST00000560383 TSPY8P0CW00 308 aa18■□□□□ 0.47
SNRPA1-210ENST00000560383 CCND3P30281 292 aaPredicted RBP18■□□□□ 0.47
SNRPA1-210ENST00000560383 TFAP4Q01664 338 aa18■□□□□ 0.47
SNRPA1-210ENST00000560383 LHX8Q68G74 356 aa18■□□□□ 0.47
SNRPA1-210ENST00000560383 MOV10L1Q9BXT6 1211 aaKnown RBP18■□□□□ 0.47
SNRPA1-210ENST00000560383 CLIP2Q9UDT6 1046 aa18■□□□□ 0.47
SNRPA1-210ENST00000560383 F5H6K3 240 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 MSCO60682 206 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 FLOT1O75955 427 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 TTLL1O95922 423 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 NOVP48745 357 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 KLRC3Q07444 240 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 FAM47AQ5JRC9 791 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 ABRAQ8N0Z2 381 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 INCENPQ9NQS7 918 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 FLRT1Q9NZU1 646 aa17.99■□□□□ 0.47
SNRPA1-210ENST00000560383 PFASO15067 1338 aa17.98■□□□□ 0.47
SNRPA1-210ENST00000560383 NDUFB10O96000 172 aa17.98■□□□□ 0.47
SNRPA1-210ENST00000560383 PCP11498 1178 aaKnown RBP17.98■□□□□ 0.47
SNRPA1-210ENST00000560383 COL6A1P12109 1028 aa17.98■□□□□ 0.47
SNRPA1-210ENST00000560383 PPP4R3BQ5MIZ7 849 aa17.98■□□□□ 0.47
SNRPA1-210ENST00000560383 OLFML2BQ68BL8 750 aa17.98■□□□□ 0.47
SNRPA1-210ENST00000560383 MROH8Q9H579 483 aa17.98■□□□□ 0.47
SNRPA1-210ENST00000560383 ERCC3P19447 782 aa17.97■□□□□ 0.47
SNRPA1-210ENST00000560383 ADORA2AP29274 412 aa17.97■□□□□ 0.47
SNRPA1-210ENST00000560383 FAM83BQ5T0W9 1011 aa17.97■□□□□ 0.47
SNRPA1-210ENST00000560383 GMCL1P1Q8NEA9 526 aa17.97■□□□□ 0.47
SNRPA1-210ENST00000560383 NPLOC4Q8TAT6 608 aa17.97■□□□□ 0.47
SNRPA1-210ENST00000560383 ATG4CQ96DT6 458 aa17.97■□□□□ 0.47
SNRPA1-210ENST00000560383 DSCC1Q9BVC3 393 aa17.97■□□□□ 0.47
SNRPA1-210ENST00000560383 IL17RBQ9NRM6 502 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms