RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 PFKFB3Q16875 520 aaPredicted RBP12.24□□□□□ -0.45
CRTC3-209ENST00000560320 GPATCH4Q5T3I0 446 aaKnown RBP12.24□□□□□ -0.45
CRTC3-209ENST00000560320 FAM173BQ6P4H8 233 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 SAMD7Q7Z3H4 446 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 CCDC148Q8NFR7 591 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 CCDC12Q8WUD4 166 aaPredicted RBP12.24□□□□□ -0.45
CRTC3-209ENST00000560320 DCAF4Q8WV16 495 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 CHAMP1Q96JM3 812 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 TMEM39BQ9GZU3 492 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 FOXP1Q9H334 677 aaPredicted RBP12.24□□□□□ -0.45
CRTC3-209ENST00000560320 SH3GLB2Q9NR46 395 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 GPRC5DQ9NZD1 345 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 TFIP11Q9UBB9 837 aaKnown RBP12.24□□□□□ -0.45
CRTC3-209ENST00000560320 HACL1Q9UJ83 578 aa12.24□□□□□ -0.45
CRTC3-209ENST00000560320 SHTN1A0MZ66 631 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 GH2P01242 217 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 PDHBP11177 359 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 EEF2P13639 858 aaKnown RBP12.23□□□□□ -0.45
CRTC3-209ENST00000560320 GUCY1A2P33402 732 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 NLRP5P59047 1200 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 RASA3Q14644 834 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 STK38Q15208 465 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 SF3A1Q15459 793 aaKnown RBP12.23□□□□□ -0.45
CRTC3-209ENST00000560320 MYSM1Q5VVJ2 828 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 DCAF15Q66K64 600 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 DPY19L2Q6NUT2 758 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 USP17L2Q6R6M4 530 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 DIS3L2Q8IYB7 885 aaKnown RBP12.23□□□□□ -0.45
CRTC3-209ENST00000560320 STAG2Q8N3U4 1231 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 PIBF1Q8WXW3 757 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 MKL1Q969V6 931 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 SH2D4AQ9H788 454 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 GINM1Q9NU53 330 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 VPS54Q9P1Q0 977 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 SYNPO2Q9UMS6 1093 aa12.23□□□□□ -0.45
CRTC3-209ENST00000560320 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
CRTC3-209ENST00000560320 USP17L5A8MUK1 530 aa12.22□□□□□ -0.45
CRTC3-209ENST00000560320 hCG_1984214I3L0E3 225 aa12.22□□□□□ -0.45
CRTC3-209ENST00000560320 GOLGA8HP0CJ92 632 aa12.22□□□□□ -0.45
CRTC3-209ENST00000560320 VEGFAP15692 232 aaPredicted RBP12.22□□□□□ -0.45
CRTC3-209ENST00000560320 U2AF2P26368 475 aaKnown RBP eCLIP12.22□□□□□ -0.45
CRTC3-209ENST00000560320 CEBPZQ03701 1054 aaKnown RBP12.22□□□□□ -0.45
CRTC3-209ENST00000560320 PKN1Q16512 942 aa12.22□□□□□ -0.45
CRTC3-209ENST00000560320 SLFN13Q68D06 897 aa12.22□□□□□ -0.45
CRTC3-209ENST00000560320 ZNF713Q8N859 430 aaPredicted RBP12.22□□□□□ -0.45
CRTC3-209ENST00000560320 LEO1Q8WVC0 666 aaPredicted RBP12.22□□□□□ -0.45
CRTC3-209ENST00000560320 GZF1Q9H116 711 aaPredicted RBP12.22□□□□□ -0.45
CRTC3-209ENST00000560320 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
CRTC3-209ENST00000560320 GJB4Q9NTQ9 266 aa12.22□□□□□ -0.45
CRTC3-209ENST00000560320 NOL7Q9UMY1 257 aaKnown RBP12.22□□□□□ -0.45
CRTC3-209ENST00000560320 KCNJ14Q9UNX9 436 aa12.22□□□□□ -0.45
CRTC3-209ENST00000560320 PPP2R3BQ9Y5P8 575 aa12.22□□□□□ -0.45
CRTC3-209ENST00000560320 hCG_1642624A0A1W2PR95 340 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 YEATS4O95619 227 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 ASNSP08243 561 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 SLC1A4P43007 532 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 ZNF543Q08ER8 600 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 GSE1Q14687 1217 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 GALNT17Q6IS24 598 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 CAVIN1Q6NZI2 390 aaKnown RBP12.21□□□□□ -0.45
CRTC3-209ENST00000560320 HEATR3Q7Z4Q2 680 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 CLEC10AQ8IUN9 316 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 NOSTRINQ8IVI9 506 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 KCNG4Q8TDN1 519 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 PHF20Q9BVI0 1012 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 VAT1LQ9HCJ6 419 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 GOPCQ9HD26 462 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
CRTC3-209ENST00000560320 RTEL1Q9NZ71 1219 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 ZBTB21Q9ULJ3 1066 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 CEP131Q9UPN4 1083 aa12.21□□□□□ -0.45
CRTC3-209ENST00000560320 DOCK1Q14185 1865 aa12.21□□□□□ -0.46
CRTC3-209ENST00000560320 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 UBE2Q2LH0YL09 131 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
CRTC3-209ENST00000560320 SNHG28P0DPA3 235 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 CAP2P40123 477 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 IKQ13123 557 aaPredicted RBP12.2□□□□□ -0.46
CRTC3-209ENST00000560320 TPRNQ4KMQ1 711 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 RILPL1Q5EBL4 403 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 ANGEL2Q5VTE6 544 aaKnown RBP12.2□□□□□ -0.46
CRTC3-209ENST00000560320 ANO1Q5XXA6 986 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 MIGA2Q7L4E1 593 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 HOMER1Q86YM7 354 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 GMCL1P1Q8NEA9 526 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 BICD2Q8TD16 824 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 USP28Q96RU2 1077 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 ZNF341Q9BYN7 854 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 RIOX1Q9H6W3 641 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 POLR3EQ9NVU0 708 aa12.2□□□□□ -0.46
CRTC3-209ENST00000560320 PITPNM2Q9BZ72 1349 aa12.19□□□□□ -0.46
CRTC3-209ENST00000560320 ZC3H4Q9UPT8 1303 aaKnown RBP12.19□□□□□ -0.46
CRTC3-209ENST00000560320 DDNO94850 711 aaPredicted RBP12.19□□□□□ -0.46
CRTC3-209ENST00000560320 EGFRP00533 1210 aa12.19□□□□□ -0.46
CRTC3-209ENST00000560320 SLURP2P0DP57 97 aa12.19□□□□□ -0.46
CRTC3-209ENST00000560320 EPS15P42566 896 aa12.19□□□□□ -0.46
CRTC3-209ENST00000560320 ME1P48163 572 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms