RNA–Protein interactions for RNA: ENST00000560099.5

PSMA4-218, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 2,596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-218ENST00000560099 LAMB1P07942 1786 aa23.3■■□□□ 1.32
PSMA4-218ENST00000560099 RPS8P62241 208 aaKnown RBP23.29■■□□□ 1.32
PSMA4-218ENST00000560099 FILIP1LQ4L180 1135 aa23.29■■□□□ 1.32
PSMA4-218ENST00000560099 TSPY2A6NKD2 308 aa23.29■■□□□ 1.32
PSMA4-218ENST00000560099 RNF225M0QZC1 329 aaPredicted RBP23.29■■□□□ 1.32
PSMA4-218ENST00000560099 HIBADHP31937 336 aaKnown RBP23.29■■□□□ 1.32
PSMA4-218ENST00000560099 TRAPPC10P48553 1259 aa23.29■■□□□ 1.32
PSMA4-218ENST00000560099 TXNRD3Q86VQ6 643 aa23.29■■□□□ 1.32
PSMA4-218ENST00000560099 CCDC24Q8N4L8 307 aa23.29■■□□□ 1.32
PSMA4-218ENST00000560099 NAA15Q9BXJ9 866 aaKnown RBP23.29■■□□□ 1.32
PSMA4-218ENST00000560099 ATP8A2Q9NTI2 1148 aa23.29■■□□□ 1.32
PSMA4-218ENST00000560099 FAM205AQ6ZU69 1335 aa23.28■■□□□ 1.32
PSMA4-218ENST00000560099 TPM1P09493 284 aa23.28■■□□□ 1.32
PSMA4-218ENST00000560099 SLC10A5Q5PT55 438 aa23.28■■□□□ 1.32
PSMA4-218ENST00000560099 C4orf32Q8N8J7 132 aa23.28■■□□□ 1.32
PSMA4-218ENST00000560099 KIAA1551Q9HCM1 1747 aa23.28■■□□□ 1.32
PSMA4-218ENST00000560099 GTPBP6O43824 516 aaPredicted RBP23.28■■□□□ 1.32
PSMA4-218ENST00000560099 GPR161Q8N6U8 529 aaKnown RBP23.28■■□□□ 1.32
PSMA4-218ENST00000560099 GPKOWQ92917 476 aaPredicted RBP eCLIP23.28■■□□□ 1.323e-6■□□□□ 9.4
PSMA4-218ENST00000560099 USP17L8P0C7I0 530 aa23.27■■□□□ 1.32
PSMA4-218ENST00000560099 RASGRP2Q7LDG7 609 aa23.27■■□□□ 1.32
PSMA4-218ENST00000560099 RASGRP4Q8TDF6 673 aa23.27■■□□□ 1.32
PSMA4-218ENST00000560099 SMARCC1Q92922 1105 aaPredicted RBP23.27■■□□□ 1.32
PSMA4-218ENST00000560099 VPS16Q9H269 839 aa23.27■■□□□ 1.32
PSMA4-218ENST00000560099 LIMA1Q9UHB6 759 aaKnown RBP23.27■■□□□ 1.32
PSMA4-218ENST00000560099 KDM4FA0A1W2PPD8 638 aa23.27■■□□□ 1.32
PSMA4-218ENST00000560099 LRRC10BA6NIK2 292 aa23.27■■□□□ 1.32
PSMA4-218ENST00000560099 SBK1Q52WX2 424 aa23.27■■□□□ 1.32
PSMA4-218ENST00000560099 STAG2Q8N3U4 1231 aa23.27■■□□□ 1.32
PSMA4-218ENST00000560099 MAPK8IP1Q9UQF2 711 aa23.27■■□□□ 1.32
PSMA4-218ENST00000560099 NRAPQ86VF7 1730 aa23.27■■□□□ 1.31
PSMA4-218ENST00000560099 N4BP3O15049 544 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 SASH3O75995 380 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 IL17RBQ9NRM6 502 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 MCM9Q9NXL9 1143 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 ARPP21Q9UBL0 812 aaPredicted RBP23.26■■□□□ 1.31
PSMA4-218ENST00000560099 RWDD2AQ9UIY3 292 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 ABL1P00519 1130 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 TYW1BQ6NUM6 668 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 PARD6BQ9BYG5 372 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 GDAQ9Y2T3 454 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 ITIH6Q6UXX5 1313 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 CCDC88AQ3V6T2 1871 aa23.26■■□□□ 1.31
PSMA4-218ENST00000560099 TBC1D8O95759 1140 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 PAK1Q13153 545 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 CC2D1AQ6P1N0 951 aaPredicted RBP23.25■■□□□ 1.31
PSMA4-218ENST00000560099 CNGA4Q8IV77 575 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 BLIDQ8IZY5 108 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 ACRBPQ8NEB7 543 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 NELFBQ8WX92 580 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 ZSWIM4Q9H7M6 989 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 TAB2Q9NYJ8 693 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 FECHP22830 423 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 COPB1P53618 953 aaKnown RBP23.25■■□□□ 1.31
PSMA4-218ENST00000560099 ERVK-24P63145 666 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 SPATA31A5Q5VU36 1347 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 SPATA31A7Q8IWB4 1347 aa23.25■■□□□ 1.31
PSMA4-218ENST00000560099 RPN1P04843 607 aaKnown RBP23.24■■□□□ 1.31
PSMA4-218ENST00000560099 TFAP4Q01664 338 aa23.24■■□□□ 1.31
PSMA4-218ENST00000560099 ZNF658Q5TYW1 1059 aaPredicted RBP23.24■■□□□ 1.31
PSMA4-218ENST00000560099 CREBRFQ8IUR6 639 aa23.24■■□□□ 1.31
PSMA4-218ENST00000560099 PDS5AQ29RF7 1337 aaKnown RBP23.24■■□□□ 1.31
PSMA4-218ENST00000560099 RABGGTAQ92696 567 aa23.24■■□□□ 1.31
PSMA4-218ENST00000560099 DYNLL2Q96FJ2 89 aa23.24■■□□□ 1.31
PSMA4-218ENST00000560099 SRP68Q9UHB9 627 aaKnown RBP23.24■■□□□ 1.31
PSMA4-218ENST00000560099 PRCPP42785 496 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 TCP11X2Q5H9J9 407 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 ZNF569Q5MCW4 686 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 ARL6IP4Q66PJ3 421 aaKnown RBP23.23■■□□□ 1.31
PSMA4-218ENST00000560099 SLC51AQ86UW1 340 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 KAT14Q9H8E8 782 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 KIF5CO60282 957 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 KIF5BP33176 963 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 LONP1P36776 959 aaKnown RBP23.23■■□□□ 1.31
PSMA4-218ENST00000560099 SLC35G1Q2M3R5 365 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 GOLGA1Q92805 767 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 NLRP3Q96P20 1036 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 ABHD10Q9NUJ1 306 aa23.23■■□□□ 1.31
PSMA4-218ENST00000560099 KCNJ18B7U540 433 aa23.22■■□□□ 1.31
PSMA4-218ENST00000560099 CALML3P27482 149 aa23.22■■□□□ 1.31
PSMA4-218ENST00000560099 KCNJ12Q14500 433 aa23.22■■□□□ 1.31
PSMA4-218ENST00000560099 NAALADL2Q58DX5 795 aa23.22■■□□□ 1.31
PSMA4-218ENST00000560099 PNMA1Q8ND90 353 aa23.22■■□□□ 1.31
PSMA4-218ENST00000560099 CCDC51Q96ER9 411 aa23.22■■□□□ 1.31
PSMA4-218ENST00000560099 PP2D1A8MPX8 630 aa23.22■■□□□ 1.31
PSMA4-218ENST00000560099 PYM1Q9BRP8 204 aaKnown RBP23.22■■□□□ 1.31
PSMA4-218ENST00000560099 MKRN1Q9UHC7 482 aaKnown RBP23.22■■□□□ 1.31
PSMA4-218ENST00000560099 PCDHA4Q9UN74 947 aa23.22■■□□□ 1.31
PSMA4-218ENST00000560099 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
PSMA4-218ENST00000560099 TFRCP02786 760 aaKnown RBP23.21■■□□□ 1.31
PSMA4-218ENST00000560099 STAT6P42226 847 aa23.21■■□□□ 1.31
PSMA4-218ENST00000560099 PTF1AQ7RTS3 328 aa23.21■■□□□ 1.31
PSMA4-218ENST00000560099 IRF2BP1Q8IU81 584 aa23.21■■□□□ 1.31
PSMA4-218ENST00000560099 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
PSMA4-218ENST00000560099 TRIM49BA6NDI0 452 aa23.21■■□□□ 1.31
PSMA4-218ENST00000560099 M0R2N6 131 aa23.21■■□□□ 1.31
PSMA4-218ENST00000560099 C12orf60Q5U649 245 aa23.21■■□□□ 1.31
PSMA4-218ENST00000560099 NUP88Q99567 741 aaPredicted RBP23.21■■□□□ 1.31
PSMA4-218ENST00000560099 PUF60Q9UHX1 559 aaKnown RBP23.21■■□□□ 1.31
PSMA4-218ENST00000560099 USP17L3A6NCW0 530 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms