RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 CCDC96Q2M329 555 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 RASGRP2Q7LDG7 609 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 LPAR1Q92633 364 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 ZSCAN10Q96SZ4 725 aaPredicted RBP10.08□□□□□ -0.8
USP3-217ENST00000560070 KRT23Q9C075 422 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 HPS5Q9UPZ3 1129 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 RABGAP1Q9Y3P9 1069 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 CTDP1Q9Y5B0 961 aaPredicted RBP10.08□□□□□ -0.8
USP3-217ENST00000560070 PTCH2Q9Y6C5 1203 aa10.08□□□□□ -0.8
USP3-217ENST00000560070 FRMPD2Q68DX3 1309 aaPredicted RBP10.07□□□□□ -0.8
USP3-217ENST00000560070 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 TOP1P11387 765 aaKnown RBP10.07□□□□□ -0.8
USP3-217ENST00000560070 ERVK-9P63128 1117 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 ERVK-24P63145 666 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 PRKCZQ05513 592 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 PKN2Q16513 984 aaKnown RBP10.07□□□□□ -0.8
USP3-217ENST00000560070 FAM110CQ1W6H9 321 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 PPP4R3BQ5MIZ7 849 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 CREB3L3Q68CJ9 461 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 TTBK2Q6IQ55 1244 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 FBXO46Q6PJ61 603 aaPredicted RBP10.07□□□□□ -0.8
USP3-217ENST00000560070 STOX1Q6ZVD7 989 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 RALYLQ86SE5 291 aaKnown RBP10.07□□□□□ -0.8
USP3-217ENST00000560070 IQCA1Q86XH1 822 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 CPXCR1Q8N123 301 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 RAET1EQ8TD07 263 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 SH3TC2Q8TF17 1288 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 COA7Q96BR5 231 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 PORCNQ9H237 461 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 CNNM2Q9H8M5 875 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 TCP11L1Q9NUJ3 509 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 MORF4L1Q9UBU8 362 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 BIN2Q9UBW5 565 aaPredicted RBP10.07□□□□□ -0.8
USP3-217ENST00000560070 SRRDQ9UH36 339 aa10.07□□□□□ -0.8
USP3-217ENST00000560070 AK9Q5TCS8 1911 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 IFIT3O14879 490 aaKnown RBP10.06□□□□□ -0.8
USP3-217ENST00000560070 ZBED4O75132 1171 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 GOLGA8HP0CJ92 632 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 PCP11498 1178 aaKnown RBP10.06□□□□□ -0.8
USP3-217ENST00000560070 SLC16A2P36021 539 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 FLT3LGP49771 235 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 TMEM132BQ14DG7 1078 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 RCSD1Q6JBY9 416 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 LBX2Q6XYB7 198 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 NCAPG2Q86XI2 1143 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 GMCL1P1Q8NEA9 526 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 NCOA7Q8NI08 942 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 TTC14Q96N46 770 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 SLF1Q9BQI6 1058 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 UBAC1Q9BSL1 405 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 KAT14Q9H8E8 782 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 RAVER2Q9HCJ3 691 aaKnown RBP10.06□□□□□ -0.8
USP3-217ENST00000560070 GPHNQ9NQX3 736 aaPredicted RBP10.06□□□□□ -0.8
USP3-217ENST00000560070 FEM1BQ9UK73 627 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 PPP1R9AQ9ULJ8 1098 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 THSD7BQ9C0I4 1608 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 MYPNQ86TC9 1320 aa10.06□□□□□ -0.8
USP3-217ENST00000560070 VWA5AO00534 786 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 CYP2B6P20813 491 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 COL9A3Q14050 684 aaPredicted RBP10.05□□□□□ -0.8
USP3-217ENST00000560070 NECTIN1Q15223 517 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 CCDC178Q5BJE1 867 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 IFIT1BQ5T764 474 aaKnown RBP10.05□□□□□ -0.8
USP3-217ENST00000560070 CCDC174Q6PII3 467 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 PLEKHH3Q7Z736 793 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 DGKHQ86XP1 1220 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 ENAHQ8N8S7 591 aaPredicted RBP10.05□□□□□ -0.8
USP3-217ENST00000560070 PRPF38AQ8NAV1 312 aaKnown RBP10.05□□□□□ -0.8
USP3-217ENST00000560070 GTF3C2Q8WUA4 911 aaPredicted RBP10.05□□□□□ -0.8
USP3-217ENST00000560070 MOV10L1Q9BXT6 1211 aaKnown RBP10.05□□□□□ -0.8
USP3-217ENST00000560070 UBA5Q9GZZ9 404 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 SPATC1LQ9H0A9 340 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 SENP2Q9HC62 589 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 VAT1LQ9HCJ6 419 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 TNKSO95271 1327 aa10.05□□□□□ -0.8
USP3-217ENST00000560070 ERICH2A1L162 156 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 PRC1O43663 620 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 ADCY3O60266 1144 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 ELNP15502 786 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 ERCC3P19447 782 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 MAPK4P31152 587 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 STAT3P40763 770 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 NOVP48745 357 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 CCNA1P78396 465 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 SLC9C1Q4G0N8 1177 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 TMEM67Q5HYA8 995 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 GPR142Q7Z601 462 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 RASEFQ8IZ41 740 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 PNMA1Q8ND90 353 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 CHURC1Q8WUH1 139 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 GMCL1Q96IK5 515 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 LRRC2Q9BYS8 371 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 CPVLQ9H3G5 476 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 GJD2Q9UKL4 321 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 SIPA1L1O43166 1804 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 PCNTO95613 3336 aa10.04□□□□□ -0.8
USP3-217ENST00000560070 PLIN4Q96Q06 1357 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 OTOFQ9HC10 1997 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 GNRH1P01148 92 aa10.03□□□□□ -0.8
USP3-217ENST00000560070 CPA1P15085 419 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms