RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 GRIN2CQ14957 1233 aa24.6■■□□□ 1.53
PSEN1-225ENST00000560005 SKAP1Q86WV1 359 aa24.6■■□□□ 1.53
PSEN1-225ENST00000560005 NCAPG2Q86XI2 1143 aa24.6■■□□□ 1.53
PSEN1-225ENST00000560005 MAML3Q96JK9 1138 aa24.6■■□□□ 1.53
PSEN1-225ENST00000560005 MROH8Q9H579 483 aa24.6■■□□□ 1.53
PSEN1-225ENST00000560005 PHF24Q9UPV7 400 aa24.6■■□□□ 1.53
PSEN1-225ENST00000560005 MPHOSPH10O00566 681 aaKnown RBP24.59■■□□□ 1.53
PSEN1-225ENST00000560005 TJAP1Q5JTD0 557 aa24.59■■□□□ 1.53
PSEN1-225ENST00000560005 CCDC8Q9H0W5 538 aaPredicted RBP24.59■■□□□ 1.53
PSEN1-225ENST00000560005 XPNPEP3Q9NQH7 507 aa24.59■■□□□ 1.53
PSEN1-225ENST00000560005 TSHZ2Q9NRE2 1034 aa24.59■■□□□ 1.53
PSEN1-225ENST00000560005 PQBP1O60828 265 aaKnown RBP24.58■■□□□ 1.53
PSEN1-225ENST00000560005 POLR3DP05423 398 aaPredicted RBP24.58■■□□□ 1.53
PSEN1-225ENST00000560005 RAG1P15918 1043 aa24.58■■□□□ 1.53
PSEN1-225ENST00000560005 ABRAQ8N0Z2 381 aa24.58■■□□□ 1.53
PSEN1-225ENST00000560005 MB21D1Q8N884 522 aa24.58■■□□□ 1.53
PSEN1-225ENST00000560005 ANTXR1Q9H6X2 564 aa24.58■■□□□ 1.53
PSEN1-225ENST00000560005 APBB1O00213 710 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 KIAA0355O15063 1070 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 RARBP10826 455 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 DNAJB2P25686 324 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 EVX2Q03828 476 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 GABPAQ06546 454 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 KIAA1755Q5JYT7 1200 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 RHPN1Q8TCX5 695 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 BACH2Q9BYV9 841 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 SMCHD1A6NHR9 2005 aa24.57■■□□□ 1.52
PSEN1-225ENST00000560005 PGK1P00558 417 aa24.56■■□□□ 1.52
PSEN1-225ENST00000560005 COL9A1P20849 921 aa24.56■■□□□ 1.52
PSEN1-225ENST00000560005 DSG3P32926 999 aa24.56■■□□□ 1.52
PSEN1-225ENST00000560005 FPGSQ05932 587 aa24.56■■□□□ 1.52
PSEN1-225ENST00000560005 MAP3K12Q12852 859 aa24.56■■□□□ 1.52
PSEN1-225ENST00000560005 RNF180Q86T96 592 aa24.56■■□□□ 1.52
PSEN1-225ENST00000560005 EAF2Q96CJ1 260 aaPredicted RBP24.56■■□□□ 1.52
PSEN1-225ENST00000560005 ATG4CQ96DT6 458 aa24.56■■□□□ 1.52
PSEN1-225ENST00000560005 RIOK1Q9BRS2 568 aaKnown RBP24.56■■□□□ 1.52
PSEN1-225ENST00000560005 NAV1Q8NEY1 1877 aa24.55■■□□□ 1.52
PSEN1-225ENST00000560005 TNFRSF10AO00220 468 aa24.55■■□□□ 1.52
PSEN1-225ENST00000560005 EIF5BO60841 1220 aaKnown RBP24.55■■□□□ 1.52
PSEN1-225ENST00000560005 FLOT1O75955 427 aa24.55■■□□□ 1.52
PSEN1-225ENST00000560005 FCER1AP12319 257 aa24.55■■□□□ 1.52
PSEN1-225ENST00000560005 BMP2KLQ5H9B9 411 aa24.55■■□□□ 1.52
PSEN1-225ENST00000560005 SAMD1Q6SPF0 538 aaPredicted RBP24.55■■□□□ 1.52
PSEN1-225ENST00000560005 PLEKHM2Q8IWE5 1019 aa24.55■■□□□ 1.52
PSEN1-225ENST00000560005 OSBPL3Q9H4L5 887 aa24.55■■□□□ 1.52
PSEN1-225ENST00000560005 TMEM39AQ9NV64 488 aa24.55■■□□□ 1.52
PSEN1-225ENST00000560005 A0A1W2PQ45 241 aaPredicted RBP24.54■■□□□ 1.52
PSEN1-225ENST00000560005 A0A1W2PQY0 241 aa24.54■■□□□ 1.52
PSEN1-225ENST00000560005 SPICE1Q8N0Z3 855 aa24.54■■□□□ 1.52
PSEN1-225ENST00000560005 CLASRPQ8N2M8 674 aaKnown RBP24.54■■□□□ 1.52
PSEN1-225ENST00000560005 NRBP1Q9UHY1 535 aa24.54■■□□□ 1.52
PSEN1-225ENST00000560005 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.53■■□□□ 1.52
PSEN1-225ENST00000560005 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.53■■□□□ 1.52
PSEN1-225ENST00000560005 ZNF576Q9H609 170 aa24.53■■□□□ 1.52
PSEN1-225ENST00000560005 MCM9Q9NXL9 1143 aa24.53■■□□□ 1.52
PSEN1-225ENST00000560005 MAGEB6P1A0A0J9YX57 407 aa24.52■■□□□ 1.52
PSEN1-225ENST00000560005 SMARCA5O60264 1052 aaPredicted RBP24.52■■□□□ 1.52
PSEN1-225ENST00000560005 PGK2P07205 417 aa24.52■■□□□ 1.52
PSEN1-225ENST00000560005 TAL1P17542 331 aaPredicted RBP24.52■■□□□ 1.52
PSEN1-225ENST00000560005 TMEM132BQ14DG7 1078 aa24.52■■□□□ 1.52
PSEN1-225ENST00000560005 TMED8Q6PL24 325 aaPredicted RBP24.52■■□□□ 1.52
PSEN1-225ENST00000560005 TMEM179Q6ZVK1 233 aa24.52■■□□□ 1.52
PSEN1-225ENST00000560005 CLEC10AQ8IUN9 316 aa24.52■■□□□ 1.52
PSEN1-225ENST00000560005 SLC44A5Q8NCS7 719 aa24.52■■□□□ 1.52
PSEN1-225ENST00000560005 LENG1Q96BZ8 264 aaPredicted RBP24.52■■□□□ 1.52
PSEN1-225ENST00000560005 TIFAQ96CG3 184 aa24.52■■□□□ 1.52
PSEN1-225ENST00000560005 MMP19Q99542 508 aa24.52■■□□□ 1.52
PSEN1-225ENST00000560005 ZNFX1Q9P2E3 1918 aaKnown RBP24.52■■□□□ 1.52
PSEN1-225ENST00000560005 TINF2Q9BSI4 451 aa24.51■■□□□ 1.51
PSEN1-225ENST00000560005 SLC25A27O95847 323 aa24.5■■□□□ 1.51
PSEN1-225ENST00000560005 FAAP100Q0VG06 881 aa24.5■■□□□ 1.51
PSEN1-225ENST00000560005 CRNKL1Q9BZJ0 848 aaKnown RBP24.5■■□□□ 1.51
PSEN1-225ENST00000560005 ROBO3Q96MS0 1386 aa24.5■■□□□ 1.51
PSEN1-225ENST00000560005 ZNF865P0CJ78 1059 aaPredicted RBP24.49■■□□□ 1.51
PSEN1-225ENST00000560005 CYP2D6P10635 497 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 AKR1A1P14550 325 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 ANKRD33Q7Z3H0 272 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 SIAH1Q8IUQ4 282 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 SDR42E1Q8WUS8 393 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 PPM1EQ8WY54 764 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 GPATCH3Q96I76 525 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 TOX2Q96NM4 488 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 VCPKMTQ9H867 229 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 ARHGEF10LQ9HCE6 1279 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 STARD7Q9NQZ5 370 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 RAPGEFL1Q9UHV5 662 aa24.49■■□□□ 1.51
PSEN1-225ENST00000560005 ADAMTS4O75173 837 aa24.48■■□□□ 1.51
PSEN1-225ENST00000560005 MX1P20591 662 aa24.48■■□□□ 1.51
PSEN1-225ENST00000560005 PDE1AP54750 535 aa24.48■■□□□ 1.51
PSEN1-225ENST00000560005 ICA1Q05084 483 aa24.48■■□□□ 1.51
PSEN1-225ENST00000560005 PARP14Q460N5 1801 aa24.48■■□□□ 1.51
PSEN1-225ENST00000560005 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.48■■□□□ 1.515e-12■□□□□ 10.8
PSEN1-225ENST00000560005 TMX2Q9Y320 296 aa24.48■■□□□ 1.51
PSEN1-225ENST00000560005 CHD9Q3L8U1 2897 aa24.48■■□□□ 1.51
PSEN1-225ENST00000560005 PLXNA1Q9UIW2 1896 aa24.47■■□□□ 1.51
PSEN1-225ENST00000560005 COL11A1P12107 1806 aaPredicted RBP24.47■■□□□ 1.51
PSEN1-225ENST00000560005 DCDC2CA8MYV0 355 aa24.47■■□□□ 1.51
PSEN1-225ENST00000560005 WDR46O15213 610 aaKnown RBP24.47■■□□□ 1.51
PSEN1-225ENST00000560005 AKR1B1P15121 316 aa24.47■■□□□ 1.51
PSEN1-225ENST00000560005 ACLYP53396 1101 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms