RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 PARP1P09874 1014 aaKnown RBP16.74■□□□□ 0.27
SMAD6-204ENST00000559931 VCAM1P19320 739 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 RXRAP19793 462 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 SREBF2Q12772 1141 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMAD6-204ENST00000559931 OTUD7BQ6GQQ9 843 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 APOA5Q6Q788 366 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 KCTD1Q719H9 257 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 MICU3Q86XE3 530 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 CTCFLQ8NI51 663 aaPredicted RBP16.74■□□□□ 0.27
SMAD6-204ENST00000559931 BRI3BPQ8WY22 251 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 GMCL1Q96IK5 515 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 C12orf42Q96LP6 360 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 AGXT2Q9BYV1 514 aa16.74■□□□□ 0.27
SMAD6-204ENST00000559931 RPAP3Q9H6T3 665 aaPredicted RBP16.74■□□□□ 0.27
SMAD6-204ENST00000559931 USP17L15C9J2P7 530 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 USP17L13C9JLJ4 530 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 USP17L11C9JVI0 530 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 USP17L18D6R9N7 530 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 USP17L22D6RA61 530 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 USP17L17D6RBQ6 530 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 USP17L19D6RCP7 530 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 USP17L20D6RJB6 530 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 WDR46O15213 610 aaKnown RBP16.73■□□□□ 0.27
SMAD6-204ENST00000559931 GOLGA8HP0CJ92 632 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 PDHBP11177 359 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 KIF5BP33176 963 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 MAP2K2P36507 400 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 USP17L24Q0WX57 530 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 STK3Q13188 491 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 TREML2Q5T2D2 321 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 JMYQ8N9B5 988 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 FANCBQ8NB91 859 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 LIMCH1Q9UPQ0 1083 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 AGTPBP1Q9UPW5 1226 aa16.73■□□□□ 0.27
SMAD6-204ENST00000559931 GOLGA8AA7E2F4 631 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 BTBD19C9JJ37 291 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 TMEM232C9JQI7 657 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 OSBPP22059 807 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 PDIA3P30101 505 aaKnown RBP16.72■□□□□ 0.27
SMAD6-204ENST00000559931 METAP2P50579 478 aaKnown RBP eCLIP16.72■□□□□ 0.272e-6■■■■□ 21.8
SMAD6-204ENST00000559931 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
SMAD6-204ENST00000559931 TROAPQ12815 778 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 GRM4Q14833 912 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 RASGRP2Q7LDG7 609 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 ZNF274Q96GC6 653 aaPredicted RBP16.72■□□□□ 0.27
SMAD6-204ENST00000559931 SLKQ9H2G2 1235 aaPredicted RBP16.72■□□□□ 0.27
SMAD6-204ENST00000559931 TPCN1Q9ULQ1 816 aa16.72■□□□□ 0.27
SMAD6-204ENST00000559931 THSD7BQ9C0I4 1608 aa16.71■□□□□ 0.27
SMAD6-204ENST00000559931 PDHXO00330 501 aa16.71■□□□□ 0.27
SMAD6-204ENST00000559931 DHX16O60231 1041 aaKnown RBP16.71■□□□□ 0.27
SMAD6-204ENST00000559931 FLOT1O75955 427 aa16.71■□□□□ 0.27
SMAD6-204ENST00000559931 CCT2P78371 535 aaKnown RBP16.71■□□□□ 0.27
SMAD6-204ENST00000559931 ZNF543Q08ER8 600 aa16.71■□□□□ 0.27
SMAD6-204ENST00000559931 MOGSQ13724 837 aa16.71■□□□□ 0.27
SMAD6-204ENST00000559931 RTN1Q16799 776 aa16.71■□□□□ 0.27
SMAD6-204ENST00000559931 GPATCH4Q5T3I0 446 aaKnown RBP16.71■□□□□ 0.27
SMAD6-204ENST00000559931 GPAT2Q6NUI2 795 aa16.71■□□□□ 0.27
SMAD6-204ENST00000559931 ANKRD23Q86SG2 305 aa16.71■□□□□ 0.27
SMAD6-204ENST00000559931 REM2Q8IYK8 340 aaPredicted RBP16.71■□□□□ 0.27
SMAD6-204ENST00000559931 FEM1BQ9UK73 627 aa16.71■□□□□ 0.27
SMAD6-204ENST00000559931 CCDC196A0A1B0GTZ2 297 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 TESPA1A2RU30 521 aaPredicted RBP16.7■□□□□ 0.26
SMAD6-204ENST00000559931 KLRF2D3W0D1 207 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 SNHG28P0DPA3 235 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 SLC16A2P36021 539 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 TM4SF4P48230 202 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 MCM2P49736 904 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 GNAQP50148 359 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 EVCP57679 992 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 COG2Q14746 738 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 TTBK2Q6IQ55 1244 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 CATSPERGQ6ZRH7 1159 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 IFNL1Q8IU54 200 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 STAG2Q8N3U4 1231 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 KIFC2Q96AC6 838 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 ZSCAN31Q96LW9 406 aaPredicted RBP16.7■□□□□ 0.26
SMAD6-204ENST00000559931 MAP3K14Q99558 947 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 PTPN18Q99952 460 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 UBA5Q9GZZ9 404 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 VAT1LQ9HCJ6 419 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 MAD2L2Q9UI95 211 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 PNMA3Q9UL41 463 aa16.7■□□□□ 0.26
SMAD6-204ENST00000559931 CTDP1Q9Y5B0 961 aaPredicted RBP16.7■□□□□ 0.26
SMAD6-204ENST00000559931 PALM3A6NDB9 673 aaPredicted RBP16.69■□□□□ 0.26
SMAD6-204ENST00000559931 CPLX1O14810 134 aa16.69■□□□□ 0.26
SMAD6-204ENST00000559931 HOXA7P31268 230 aaPredicted RBP16.69■□□□□ 0.26
SMAD6-204ENST00000559931 STAT2P52630 851 aa16.69■□□□□ 0.26
SMAD6-204ENST00000559931 MAP2K1Q02750 393 aaPredicted RBP16.69■□□□□ 0.26
SMAD6-204ENST00000559931 PPP2R5BQ15173 497 aa16.69■□□□□ 0.26
SMAD6-204ENST00000559931 FAM160B2Q86V87 743 aa16.69■□□□□ 0.26
SMAD6-204ENST00000559931 CCDC82Q8N4S0 544 aa16.69■□□□□ 0.26
SMAD6-204ENST00000559931 SLF1Q9BQI6 1058 aa16.69■□□□□ 0.26
SMAD6-204ENST00000559931 ASCC2Q9H1I8 757 aaPredicted RBP16.69■□□□□ 0.26
SMAD6-204ENST00000559931 FBXO28Q9NVF7 368 aa16.69■□□□□ 0.26
SMAD6-204ENST00000559931 RBM28Q9NW13 759 aaKnown RBP16.69■□□□□ 0.26
SMAD6-204ENST00000559931 HOXC10Q9NYD6 342 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms