RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 DHRS1Q96LJ7 313 aa6.33□□□□□ -1.4
SPG11-218ENST00000559754 FERD3LQ96RJ6 166 aa6.33□□□□□ -1.4
SPG11-218ENST00000559754 MKRN2Q9H000 416 aaKnown RBP6.33□□□□□ -1.4
SPG11-218ENST00000559754 EPB41L4BQ9H329 900 aa6.33□□□□□ -1.4
SPG11-218ENST00000559754 CWC22Q9HCG8 908 aaKnown RBP6.33□□□□□ -1.4
SPG11-218ENST00000559754 ZNRF3Q9ULT6 936 aa6.33□□□□□ -1.4
SPG11-218ENST00000559754 SIGLEC6O43699 453 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 PCBP3P57721 371 aaKnown RBP6.32□□□□□ -1.4
SPG11-218ENST00000559754 JAG1P78504 1218 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 COL9A2Q14055 689 aaPredicted RBP6.32□□□□□ -1.4
SPG11-218ENST00000559754 SNX17Q15036 470 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 ZNF124Q15973 351 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 ZNF654Q8IZM8 581 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 TCTN2Q96GX1 697 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 SPATA32Q96LK8 384 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 SLC6A18Q96N87 628 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 DIRC2Q96SL1 478 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 NSUN3Q9H649 340 aaKnown RBP6.32□□□□□ -1.4
SPG11-218ENST00000559754 ANTXR1Q9H6X2 564 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 PCDHB12Q9Y5F1 795 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 PCDHGB7Q9Y5F8 929 aa6.32□□□□□ -1.4
SPG11-218ENST00000559754 RECKO95980 971 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 ENDOUP21128 410 aaKnown RBP6.31□□□□□ -1.4
SPG11-218ENST00000559754 RPL10P27635 214 aaKnown RBP6.31□□□□□ -1.4
SPG11-218ENST00000559754 TMC3Q7Z5M5 1100 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 TMEM192Q8IY95 271 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 TAB3Q8N5C8 712 aaPredicted RBP6.31□□□□□ -1.4
SPG11-218ENST00000559754 USHBP1Q8N6Y0 703 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 LINC00116Q8NCU8 138 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 ZNF512BQ96KM6 892 aaPredicted RBP6.31□□□□□ -1.4
SPG11-218ENST00000559754 TM9SF2Q99805 663 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 SLC6A17Q9H1V8 727 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 SP110Q9HB58 689 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 DCP1AQ9NPI6 582 aaPredicted RBP6.31□□□□□ -1.4
SPG11-218ENST00000559754 PRR13Q9NZ81 148 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 ZMYM5Q9UJ78 669 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
SPG11-218ENST00000559754 FBXL21Q9UKT6 434 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 TCFL5Q9UL49 500 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 ZNF281Q9Y2X9 895 aa6.31□□□□□ -1.4
SPG11-218ENST00000559754 PRAMEF1O95521 474 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 TSPAN15O95858 294 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 TRHRP34981 398 aaPredicted RBP6.3□□□□□ -1.4
SPG11-218ENST00000559754 SYDE1Q6ZW31 735 aaPredicted RBP6.3□□□□□ -1.4
SPG11-218ENST00000559754 WAPLQ7Z5K2 1190 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 IRF2BP1Q8IU81 584 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 RBBP8NLQ8NC74 664 aaPredicted RBP6.3□□□□□ -1.4
SPG11-218ENST00000559754 LINC01599Q8WXQ3 324 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 SMARCC1Q92922 1105 aaPredicted RBP6.3□□□□□ -1.4
SPG11-218ENST00000559754 SLC9A7Q96T83 725 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 FOXP3Q9BZS1 431 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 PRDM14Q9GZV8 571 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 RNF32Q9H0A6 362 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 C19orf44Q9H6X5 657 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 CHST7Q9NS84 486 aa6.3□□□□□ -1.4
SPG11-218ENST00000559754 SUCOQ9UBS9 1254 aaKnown RBP6.3□□□□□ -1.4
SPG11-218ENST00000559754 NFIBO00712 420 aa6.29□□□□□ -1.4
SPG11-218ENST00000559754 KIR2DL1P43626 348 aaPredicted RBP6.29□□□□□ -1.4
SPG11-218ENST00000559754 KIR2DL2P43627 348 aaPredicted RBP6.29□□□□□ -1.4
SPG11-218ENST00000559754 RAP1GAPP47736 663 aa6.29□□□□□ -1.4
SPG11-218ENST00000559754 SNW1Q13573 536 aaKnown RBP6.29□□□□□ -1.4
SPG11-218ENST00000559754 AUHQ13825 339 aaKnown RBP6.29□□□□□ -1.4
SPG11-218ENST00000559754 FBXW10Q5XX13 1052 aa6.29□□□□□ -1.4
SPG11-218ENST00000559754 SLC26A8Q96RN1 970 aa6.29□□□□□ -1.4
SPG11-218ENST00000559754 PODXL2Q9NZ53 605 aa6.29□□□□□ -1.4
SPG11-218ENST00000559754 GPR160Q9UJ42 338 aa6.29□□□□□ -1.4
SPG11-218ENST00000559754 YBX2Q9Y2T7 364 aaKnown RBP6.29□□□□□ -1.4
SPG11-218ENST00000559754 SYPP08247 313 aa6.28□□□□□ -1.4
SPG11-218ENST00000559754 TMEM253P0C7T8 217 aa6.28□□□□□ -1.4
SPG11-218ENST00000559754 RACK1P63244 317 aaKnown RBP6.28□□□□□ -1.4
SPG11-218ENST00000559754 SLC14A2Q15849 920 aa6.28□□□□□ -1.4
SPG11-218ENST00000559754 MRRFQ96E11 262 aaKnown RBP6.28□□□□□ -1.4
SPG11-218ENST00000559754 MAP6Q96JE9 813 aa6.28□□□□□ -1.4
SPG11-218ENST00000559754 TOX2Q96NM4 488 aa6.28□□□□□ -1.4
SPG11-218ENST00000559754 CRBNQ96SW2 442 aa6.28□□□□□ -1.4
SPG11-218ENST00000559754 G6PC3Q9BUM1 346 aa6.28□□□□□ -1.4
SPG11-218ENST00000559754 ACRP10323 421 aa6.27□□□□□ -1.41
SPG11-218ENST00000559754 PMS1P54277 932 aaKnown RBP6.27□□□□□ -1.41
SPG11-218ENST00000559754 BBS9Q3SYG4 887 aa6.27□□□□□ -1.41
SPG11-218ENST00000559754 ANKLE2Q86XL3 938 aa6.27□□□□□ -1.41
SPG11-218ENST00000559754 CCDC144CPQ8IYA2 1237 aa6.27□□□□□ -1.41
SPG11-218ENST00000559754 INTS4Q96HW7 963 aaKnown RBP6.27□□□□□ -1.41
SPG11-218ENST00000559754 GFOD1Q9NXC2 390 aa6.27□□□□□ -1.41
SPG11-218ENST00000559754 TMEM82A0PJX8 343 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 NRDCO43847 1150 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 GUCY2CP25092 1073 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 BMP8BP34820 402 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 RANGAP1P46060 587 aaPredicted RBP6.26□□□□□ -1.41
SPG11-218ENST00000559754 PAK2Q13177 524 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 TIGD5Q53EQ6 642 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 METTL16Q86W50 562 aaKnown RBP6.26□□□□□ -1.41
SPG11-218ENST00000559754 C7orf61Q8IZ16 206 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 FCRL2Q96LA5 508 aaPredicted RBP6.26□□□□□ -1.41
SPG11-218ENST00000559754 DSCC1Q9BVC3 393 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 TNFRSF10DQ9UBN6 386 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 EBF1Q9UH73 591 aa6.26□□□□□ -1.41
SPG11-218ENST00000559754 PPT2Q9UMR5 302 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms