RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 L1CAMP32004 1257 aa15.91■□□□□ 0.14
CASC4-208ENST00000559151 SNW1Q13573 536 aaKnown RBP15.91■□□□□ 0.14
CASC4-208ENST00000559151 YOD1Q5VVQ6 348 aaPredicted RBP15.91■□□□□ 0.14
CASC4-208ENST00000559151 EXOC2Q96KP1 924 aa15.91■□□□□ 0.14
CASC4-208ENST00000559151 CD2APQ9Y5K6 639 aa15.91■□□□□ 0.14
CASC4-208ENST00000559151 TBX1O43435 398 aa15.9■□□□□ 0.14
CASC4-208ENST00000559151 HSP90AA2PQ14568 343 aaPredicted RBP15.9■□□□□ 0.14
CASC4-208ENST00000559151 FILIP1Q7Z7B0 1213 aa15.9■□□□□ 0.14
CASC4-208ENST00000559151 BVESQ8NE79 360 aa15.9■□□□□ 0.14
CASC4-208ENST00000559151 AARSD1Q9BTE6 412 aaKnown RBP15.9■□□□□ 0.14
CASC4-208ENST00000559151 TRAV20A0A0B4J274 112 aa15.89■□□□□ 0.13
CASC4-208ENST00000559151 ZC3H12BQ5HYM0 836 aaKnown RBP15.89■□□□□ 0.13
CASC4-208ENST00000559151 PRDM14Q9GZV8 571 aa15.89■□□□□ 0.13
CASC4-208ENST00000559151 CYP7A1P22680 504 aa15.88■□□□□ 0.13
CASC4-208ENST00000559151 ZNF445P59923 1031 aa15.88■□□□□ 0.13
CASC4-208ENST00000559151 CD163Q86VB7 1156 aa15.88■□□□□ 0.13
CASC4-208ENST00000559151 CLEC10AQ8IUN9 316 aa15.88■□□□□ 0.13
CASC4-208ENST00000559151 ANKRD13AQ8IZ07 590 aa15.88■□□□□ 0.13
CASC4-208ENST00000559151 BRF1Q92994 677 aa15.88■□□□□ 0.13
CASC4-208ENST00000559151 CDC6Q99741 560 aa15.88■□□□□ 0.13
CASC4-208ENST00000559151 AKT3Q9Y243 479 aa15.88■□□□□ 0.13
CASC4-208ENST00000559151 PTPROQ16827 1216 aa15.87■□□□□ 0.13
CASC4-208ENST00000559151 C21orf62-AS1Q17RA5 79 aa15.87■□□□□ 0.13
CASC4-208ENST00000559151 FAM209AQ5JX71 171 aa15.87■□□□□ 0.13
CASC4-208ENST00000559151 SYNPOQ8N3V7 929 aa15.87■□□□□ 0.13
CASC4-208ENST00000559151 GIMAP7Q8NHV1 300 aa15.87■□□□□ 0.13
CASC4-208ENST00000559151 FAM83CQ9BQN1 747 aa15.87■□□□□ 0.13
CASC4-208ENST00000559151 PRDM5Q9NQX1 630 aaPredicted RBP15.87■□□□□ 0.13
CASC4-208ENST00000559151 IFT57Q9NWB7 429 aa15.87■□□□□ 0.13
CASC4-208ENST00000559151 NOP56O00567 594 aaKnown RBP15.86■□□□□ 0.13
CASC4-208ENST00000559151 GRIA2P42262 883 aa15.86■□□□□ 0.13
CASC4-208ENST00000559151 NOL9Q5SY16 702 aaKnown RBP15.86■□□□□ 0.13
CASC4-208ENST00000559151 GATA6Q92908 595 aa15.86■□□□□ 0.13
CASC4-208ENST00000559151 MRGPRX3Q96LB0 322 aa15.86■□□□□ 0.13
CASC4-208ENST00000559151 GFOD1Q9NXC2 390 aa15.86■□□□□ 0.13
CASC4-208ENST00000559151 CGGBP1Q9UFW8 167 aaPredicted RBP15.86■□□□□ 0.13
CASC4-208ENST00000559151 EMC9Q9Y3B6 208 aa15.86■□□□□ 0.13
CASC4-208ENST00000559151 PRKAB1Q9Y478 270 aa15.86■□□□□ 0.13
CASC4-208ENST00000559151 C1QTNF9BB2RNN3 333 aa15.85■□□□□ 0.13
CASC4-208ENST00000559151 ADMP35318 185 aa15.85■□□□□ 0.13
CASC4-208ENST00000559151 FAM214BQ7L5A3 538 aa15.85■□□□□ 0.13
CASC4-208ENST00000559151 KISS1RQ969F8 398 aaPredicted RBP15.85■□□□□ 0.13
CASC4-208ENST00000559151 RCC1LQ96I51 464 aaKnown RBP15.85■□□□□ 0.13
CASC4-208ENST00000559151 Q96M66 194 aa15.85■□□□□ 0.13
CASC4-208ENST00000559151 NOL6Q9H6R4 1146 aaKnown RBP15.85■□□□□ 0.13
CASC4-208ENST00000559151 HMX2A2RU54 273 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 DNAJC6O75061 913 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 CBX7O95931 251 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 PPP2R5DQ14738 602 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 SFRP5Q5T4F7 317 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 TMC3Q7Z5M5 1100 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 TRIM59Q8IWR1 403 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 ARHGEF39Q8N4T4 335 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 TBC1D32Q96NH3 1257 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 DHRS4Q9BTZ2 278 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 SPC25Q9HBM1 224 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 MRPS23Q9Y3D9 190 aaKnown RBP15.84■□□□□ 0.13
CASC4-208ENST00000559151 FHOD1Q9Y613 1164 aa15.84■□□□□ 0.13
CASC4-208ENST00000559151 TRBV23-1A0A0A0MS06 115 aa15.83■□□□□ 0.12
CASC4-208ENST00000559151 CAPNS1P04632 268 aa15.83■□□□□ 0.12
CASC4-208ENST00000559151 CBX2Q14781 532 aaPredicted RBP15.83■□□□□ 0.12
CASC4-208ENST00000559151 DALRD3Q5D0E6 543 aaKnown RBP15.83■□□□□ 0.12
CASC4-208ENST00000559151 DTWD2Q8NBA8 298 aa15.83■□□□□ 0.12
CASC4-208ENST00000559151 BTN2A2Q8WVV5 523 aa15.83■□□□□ 0.12
CASC4-208ENST00000559151 C7orf69Q9H7B7 122 aa15.83■□□□□ 0.12
CASC4-208ENST00000559151 A0A087WZG4 1122 aa15.82■□□□□ 0.12
CASC4-208ENST00000559151 PRODHO43272 600 aa15.82■□□□□ 0.12
CASC4-208ENST00000559151 TAF7LQ5H9L4 462 aa15.82■□□□□ 0.12
CASC4-208ENST00000559151 GPAT2Q6NUI2 795 aa15.82■□□□□ 0.12
CASC4-208ENST00000559151 SHISA5Q8N114 240 aa15.82■□□□□ 0.12
CASC4-208ENST00000559151 FIBCD1Q8N539 461 aa15.82■□□□□ 0.12
CASC4-208ENST00000559151 SYTL5Q8TDW5 730 aaPredicted RBP15.82■□□□□ 0.12
CASC4-208ENST00000559151 DCAF5Q96JK2 942 aa15.82■□□□□ 0.12
CASC4-208ENST00000559151 CCDC163A0A0D9SF12 145 aa15.81■□□□□ 0.12
CASC4-208ENST00000559151 KCNH1O95259 989 aa15.81■□□□□ 0.12
CASC4-208ENST00000559151 OGFOD3Q6PK18 319 aa15.81■□□□□ 0.12
CASC4-208ENST00000559151 ZAR1Q86SH2 424 aa15.81■□□□□ 0.12
CASC4-208ENST00000559151 COX4I2Q96KJ9 171 aa15.81■□□□□ 0.12
CASC4-208ENST00000559151 HEXIM2Q96MH2 286 aaKnown RBP15.81■□□□□ 0.12
CASC4-208ENST00000559151 RAXQ9Y2V3 346 aa15.81■□□□□ 0.12
CASC4-208ENST00000559151 PRR33A8MZF0 331 aa15.8■□□□□ 0.12
CASC4-208ENST00000559151 FGFR1P11362 822 aa15.8■□□□□ 0.12
CASC4-208ENST00000559151 PABPC1P11940 636 aaKnown RBP15.8■□□□□ 0.12
CASC4-208ENST00000559151 POMZP3Q6PJE2 187 aa15.8■□□□□ 0.12
CASC4-208ENST00000559151 CRACR2BQ8N4Y2 399 aaPredicted RBP15.8■□□□□ 0.12
CASC4-208ENST00000559151 TP53INP1Q96A56 240 aa15.8■□□□□ 0.12
CASC4-208ENST00000559151 IPO9Q96P70 1041 aaKnown RBP15.8■□□□□ 0.12
CASC4-208ENST00000559151 IER2Q9BTL4 223 aa15.8■□□□□ 0.12
CASC4-208ENST00000559151 NCOA5Q9HCD5 579 aaKnown RBP15.8■□□□□ 0.12
CASC4-208ENST00000559151 MINPP1Q9UNW1 487 aa15.8■□□□□ 0.12
CASC4-208ENST00000559151 NSMFQ6X4W1 530 aa15.79■□□□□ 0.12
CASC4-208ENST00000559151 SCUBE1Q8IWY4 988 aa15.79■□□□□ 0.12
CASC4-208ENST00000559151 OSBP2Q969R2 916 aa15.79■□□□□ 0.12
CASC4-208ENST00000559151 PRR13Q9NZ81 148 aa15.79■□□□□ 0.12
CASC4-208ENST00000559151 KCNH3Q9ULD8 1083 aa15.79■□□□□ 0.12
CASC4-208ENST00000559151 COL4A3BPQ9Y5P4 624 aa15.79■□□□□ 0.12
CASC4-208ENST00000559151 KIR3DL1P43629 444 aa15.78■□□□□ 0.12
CASC4-208ENST00000559151 MASP1P48740 699 aa15.78■□□□□ 0.12
CASC4-208ENST00000559151 ZDHHC15Q96MV8 337 aa15.78■□□□□ 0.12
CASC4-208ENST00000559151 DSCC1Q9BVC3 393 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms